EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000016707 (Gene tree)
Gene ID: -
Gene Symbol: SRFBP1
Alias: BUD22|FLJ25286|Rlb1|STRAP|p49
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 51919 bases
Position: chrLZNR01002481.1:2366-54284
Accession: 26333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000021269	BUD22	PF09073.10	1.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000023762	SRFBP1-201	1500	-	ENSUAMP00000021269	412 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000016707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000016707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000016707	SRFBP1	100	82.126	ENSG00000151304	SRFBP1	97	81.884	Homo_sapiens
ENSUAMG00000016707	SRFBP1	78	55.769	ENSAPOG00000021469	-	82	35.934	Acanthochromis_polyacanthus
ENSUAMG00000016707	SRFBP1	100	94.928	ENSAMEG00000018050	SRFBP1	97	94.928	Ailuropoda_melanoleuca
ENSUAMG00000016707	SRFBP1	100	38.462	ENSACIG00000019127	-	96	39.906	Amphilophus_citrinellus
ENSUAMG00000016707	SRFBP1	100	36.929	ENSAOCG00000002182	-	81	36.929	Amphiprion_ocellaris
ENSUAMG00000016707	SRFBP1	100	36.590	ENSAPEG00000003041	-	82	35.583	Amphiprion_percula
ENSUAMG00000016707	SRFBP1	100	36.929	ENSATEG00000007289	-	82	38.351	Anabas_testudineus
ENSUAMG00000016707	SRFBP1	100	44.138	ENSACAG00000003779	SRFBP1	97	44.138	Anolis_carolinensis
ENSUAMG00000016707	SRFBP1	100	81.159	ENSANAG00000022485	SRFBP1	96	80.918	Aotus_nancymaae
ENSUAMG00000016707	SRFBP1	100	36.570	ENSACLG00000013909	-	86	36.777	Astatotilapia_calliptera
ENSUAMG00000016707	SRFBP1	84	48.246	ENSAMXG00000040976	srfbp1	88	48.246	Astyanax_mexicanus
ENSUAMG00000016707	SRFBP1	100	83.293	ENSBTAG00000014320	SRFBP1	99	83.293	Bos_taurus
ENSUAMG00000016707	SRFBP1	100	81.401	ENSCJAG00000017177	SRFBP1	97	81.159	Callithrix_jacchus
ENSUAMG00000016707	SRFBP1	100	92.010	ENSCAFG00000000512	SRFBP1	97	92.010	Canis_familiaris
ENSUAMG00000016707	SRFBP1	100	92.010	ENSCAFG00020009389	SRFBP1	96	92.010	Canis_lupus_dingo
ENSUAMG00000016707	SRFBP1	100	58.495	ENSTSYG00000006869	-	99	58.495	Carlito_syrichta
ENSUAMG00000016707	SRFBP1	100	79.177	ENSTSYG00000008630	-	97	79.177	Carlito_syrichta
ENSUAMG00000016707	SRFBP1	100	73.141	ENSCPOG00000004695	SRFBP1	97	73.141	Cavia_porcellus
ENSUAMG00000016707	SRFBP1	100	81.159	ENSCCAG00000032237	-	97	80.918	Cebus_capucinus
ENSUAMG00000016707	SRFBP1	100	81.884	ENSCATG00000040904	SRFBP1	97	82.609	Cercocebus_atys
ENSUAMG00000016707	SRFBP1	100	72.596	ENSCLAG00000003630	SRFBP1	96	72.356	Chinchilla_lanigera
ENSUAMG00000016707	SRFBP1	100	78.744	ENSCSAG00000014636	SRFBP1	97	80.918	Chlorocebus_sabaeus
ENSUAMG00000016707	SRFBP1	100	80.676	ENSCANG00000041298	SRFBP1	97	81.401	Colobus_angolensis_palliatus
ENSUAMG00000016707	SRFBP1	100	71.566	ENSCGRG00001000718	Srfbp1	94	71.566	Cricetulus_griseus_chok1gshd
ENSUAMG00000016707	SRFBP1	100	71.325	ENSCGRG00000010837	Srfbp1	100	71.325	Cricetulus_griseus_crigri
ENSUAMG00000016707	SRFBP1	100	39.762	ENSCSEG00000011789	-	88	60.714	Cynoglossus_semilaevis
ENSUAMG00000016707	SRFBP1	100	39.078	ENSCVAG00000013010	-	95	38.795	Cyprinodon_variegatus
ENSUAMG00000016707	SRFBP1	82	77.876	ENSDNOG00000017733	SRFBP1	100	77.876	Dasypus_novemcinctus
ENSUAMG00000016707	SRFBP1	82	67.359	ENSETEG00000012408	SRFBP1	100	67.953	Echinops_telfairi
ENSUAMG00000016707	SRFBP1	73	47.107	ENSEBUG00000007806	SRFBP1	56	47.107	Eptatretus_burgeri
ENSUAMG00000016707	SRFBP1	100	86.925	ENSEASG00005012421	SRFBP1	96	86.925	Equus_asinus_asinus
ENSUAMG00000016707	SRFBP1	100	87.167	ENSECAG00000015330	SRFBP1	96	87.167	Equus_caballus
ENSUAMG00000016707	SRFBP1	100	71.739	ENSEEUG00000011514	SRFBP1	96	71.739	Erinaceus_europaeus
ENSUAMG00000016707	SRFBP1	100	39.246	ENSELUG00000018381	-	95	39.381	Esox_lucius
ENSUAMG00000016707	SRFBP1	100	89.563	ENSFCAG00000035118	SRFBP1	96	89.563	Felis_catus
ENSUAMG00000016707	SRFBP1	100	43.508	ENSFALG00000007595	SRFBP1	100	44.419	Ficedula_albicollis
ENSUAMG00000016707	SRFBP1	100	70.574	ENSFDAG00000005102	SRFBP1	96	70.574	Fukomys_damarensis
ENSUAMG00000016707	SRFBP1	76	64.286	ENSFHEG00000000477	-	83	35.234	Fundulus_heteroclitus
ENSUAMG00000016707	SRFBP1	100	43.678	ENSGALG00000005316	SRFBP1	97	44.342	Gallus_gallus
ENSUAMG00000016707	SRFBP1	74	68.571	ENSGAFG00000018777	-	85	38.046	Gambusia_affinis
ENSUAMG00000016707	SRFBP1	100	40.288	ENSGACG00000009055	-	81	40.288	Gasterosteus_aculeatus
ENSUAMG00000016707	SRFBP1	100	46.136	ENSGAGG00000024915	SRFBP1	99	46.604	Gopherus_agassizii
ENSUAMG00000016707	SRFBP1	100	83.092	ENSGGOG00000007725	SRFBP1	97	82.609	Gorilla_gorilla
ENSUAMG00000016707	SRFBP1	69	62.500	ENSHCOG00000020644	-	82	36.346	Hippocampus_comes
ENSUAMG00000016707	SRFBP1	100	76.867	ENSSTOG00000029184	SRFBP1	95	76.867	Ictidomys_tridecemlineatus
ENSUAMG00000016707	SRFBP1	100	66.102	ENSJJAG00000013229	Srfbp1	100	66.828	Jaculus_jaculus
ENSUAMG00000016707	SRFBP1	82	35.958	ENSLACG00000004456	SRFBP1	100	36.483	Latimeria_chalumnae
ENSUAMG00000016707	SRFBP1	100	43.016	ENSLOCG00000008772	SRFBP1	98	41.667	Lepisosteus_oculatus
ENSUAMG00000016707	SRFBP1	100	81.928	ENSLAFG00000015303	SRFBP1	95	81.928	Loxodonta_africana
ENSUAMG00000016707	SRFBP1	100	81.643	ENSMFAG00000031263	SRFBP1	97	82.367	Macaca_fascicularis
ENSUAMG00000016707	SRFBP1	100	81.643	ENSMMUG00000021009	SRFBP1	98	82.367	Macaca_mulatta
ENSUAMG00000016707	SRFBP1	100	81.643	ENSMNEG00000040870	SRFBP1	97	82.367	Macaca_nemestrina
ENSUAMG00000016707	SRFBP1	100	35.950	ENSMAMG00000004632	-	84	38.776	Mastacembelus_armatus
ENSUAMG00000016707	SRFBP1	100	37.317	ENSMZEG00005000432	-	86	37.736	Maylandia_zebra
ENSUAMG00000016707	SRFBP1	100	70.531	ENSMAUG00000009431	Srfbp1	95	70.531	Mesocricetus_auratus
ENSUAMG00000016707	SRFBP1	100	81.643	ENSMICG00000042923	SRFBP1	97	82.367	Microcebus_murinus
ENSUAMG00000016707	SRFBP1	100	68.675	ENSMOCG00000006206	Srfbp1	94	67.933	Microtus_ochrogaster
ENSUAMG00000016707	SRFBP1	66	39.643	ENSMMOG00000021202	-	95	37.069	Mola_mola
ENSUAMG00000016707	SRFBP1	100	57.683	ENSMODG00000013487	-	96	57.683	Monodelphis_domestica
ENSUAMG00000016707	SRFBP1	99	35.010	ENSMALG00000001812	-	86	35.534	Monopterus_albus
ENSUAMG00000016707	SRFBP1	100	68.421	MGP_CAROLIEiJ_G0022271	Srfbp1	94	69.324	Mus_caroli
ENSUAMG00000016707	SRFBP1	100	67.866	ENSMUSG00000024528	Srfbp1	94	67.386	Mus_musculus
ENSUAMG00000016707	SRFBP1	100	66.906	MGP_PahariEiJ_G0019004	Srfbp1	94	66.746	Mus_pahari
ENSUAMG00000016707	SRFBP1	100	68.345	MGP_SPRETEiJ_G0023184	Srfbp1	94	68.345	Mus_spretus
ENSUAMG00000016707	SRFBP1	100	93.204	ENSMPUG00000013031	SRFBP1	100	92.476	Mustela_putorius_furo
ENSUAMG00000016707	SRFBP1	100	84.019	ENSMLUG00000009984	SRFBP1	97	84.019	Myotis_lucifugus
ENSUAMG00000016707	SRFBP1	100	70.602	ENSNGAG00000013229	Srfbp1	96	71.084	Nannospalax_galili
ENSUAMG00000016707	SRFBP1	100	39.593	ENSNBRG00000001146	-	96	39.593	Neolamprologus_brichardi
ENSUAMG00000016707	SRFBP1	100	83.293	ENSNLEG00000011949	SRFBP1	96	83.293	Nomascus_leucogenys
ENSUAMG00000016707	SRFBP1	54	67.797	ENSMEUG00000009383	-	51	67.797	Notamacropus_eugenii
ENSUAMG00000016707	SRFBP1	70	74.545	ENSOPRG00000003881	-	100	58.402	Ochotona_princeps
ENSUAMG00000016707	SRFBP1	100	70.913	ENSODEG00000007258	SRFBP1	100	70.673	Octodon_degus
ENSUAMG00000016707	SRFBP1	89	50.000	ENSOANG00000010042	-	99	47.895	Ornithorhynchus_anatinus
ENSUAMG00000016707	SRFBP1	100	75.971	ENSOCUG00000009556	SRFBP1	96	75.971	Oryctolagus_cuniculus
ENSUAMG00000016707	SRFBP1	99	39.261	ENSORLG00015000238	-	95	39.540	Oryzias_latipes_hsok
ENSUAMG00000016707	SRFBP1	100	77.053	ENSOGAG00000032423	SRFBP1	97	77.053	Otolemur_garnettii
ENSUAMG00000016707	SRFBP1	100	81.884	ENSPPAG00000035848	SRFBP1	96	81.401	Pan_paniscus
ENSUAMG00000016707	SRFBP1	100	90.049	ENSPPRG00000001695	SRFBP1	96	90.049	Panthera_pardus
ENSUAMG00000016707	SRFBP1	100	89.320	ENSPTIG00000012305	SRFBP1	96	89.320	Panthera_tigris_altaica
ENSUAMG00000016707	SRFBP1	100	81.884	ENSPTRG00000017172	SRFBP1	96	81.401	Pan_troglodytes
ENSUAMG00000016707	SRFBP1	100	82.324	ENSPANG00000003799	SRFBP1	97	82.324	Papio_anubis
ENSUAMG00000016707	SRFBP1	72	53.279	ENSPKIG00000024291	-	69	53.279	Paramormyrops_kingsleyae
ENSUAMG00000016707	SRFBP1	100	46.154	ENSPSIG00000010650	SRFBP1	97	46.154	Pelodiscus_sinensis
ENSUAMG00000016707	SRFBP1	100	40.371	ENSPMGG00000001675	-	96	40.835	Periophthalmus_magnuspinnatus
ENSUAMG00000016707	SRFBP1	100	59.952	ENSPCIG00000028532	SRFBP1	91	59.952	Phascolarctos_cinereus
ENSUAMG00000016707	SRFBP1	100	39.909	ENSPFOG00000005272	-	85	39.866	Poecilia_formosa
ENSUAMG00000016707	SRFBP1	76	65.854	ENSPLAG00000018282	-	86	37.475	Poecilia_latipinna
ENSUAMG00000016707	SRFBP1	76	65.854	ENSPMEG00000020184	-	86	37.344	Poecilia_mexicana
ENSUAMG00000016707	SRFBP1	99	40.191	ENSPREG00000017248	-	96	40.952	Poecilia_reticulata
ENSUAMG00000016707	SRFBP1	100	82.367	ENSPPYG00000015714	SRFBP1	96	81.884	Pongo_abelii
ENSUAMG00000016707	SRFBP1	100	80.676	ENSPCOG00000027331	SRFBP1	97	81.401	Propithecus_coquereli
ENSUAMG00000016707	SRFBP1	57	92.086	ENSPVAG00000017512	-	54	92.086	Pteropus_vampyrus
ENSUAMG00000016707	SRFBP1	100	38.532	ENSPNYG00000010355	-	96	39.414	Pundamilia_nyererei
ENSUAMG00000016707	SRFBP1	68	55.357	ENSPNAG00000029666	srfbp1	87	55.357	Pygocentrus_nattereri
ENSUAMG00000016707	SRFBP1	100	67.225	ENSRNOG00000014808	Srfbp1	94	67.225	Rattus_norvegicus
ENSUAMG00000016707	SRFBP1	100	78.795	ENSRBIG00000031064	SRFBP1	99	78.554	Rhinopithecus_bieti
ENSUAMG00000016707	SRFBP1	100	82.367	ENSRROG00000026932	SRFBP1	97	82.126	Rhinopithecus_roxellana
ENSUAMG00000016707	SRFBP1	100	81.884	ENSSBOG00000015464	-	96	81.643	Saimiri_boliviensis_boliviensis
ENSUAMG00000016707	SRFBP1	100	59.518	ENSSHAG00000016003	SRFBP1	96	59.518	Sarcophilus_harrisii
ENSUAMG00000016707	SRFBP1	100	37.284	ENSSFOG00015001274	srfbp1	97	37.500	Scleropages_formosus
ENSUAMG00000016707	SRFBP1	100	34.661	ENSSMAG00000020630	-	83	34.990	Scophthalmus_maximus
ENSUAMG00000016707	SRFBP1	100	36.419	ENSSDUG00000001828	-	83	36.680	Seriola_dumerili
ENSUAMG00000016707	SRFBP1	100	77.590	ENSSARG00000010669	SRFBP1	96	78.554	Sorex_araneus
ENSUAMG00000016707	SRFBP1	100	43.823	ENSSPUG00000009204	SRFBP1	99	43.519	Sphenodon_punctatus
ENSUAMG00000016707	SRFBP1	86	43.182	ENSSPAG00000010728	-	82	34.834	Stegastes_partitus
ENSUAMG00000016707	SRFBP1	100	85.472	ENSSSCG00000022656	SRFBP1	96	85.472	Sus_scrofa
ENSUAMG00000016707	SRFBP1	100	41.339	ENSTNIG00000009267	-	95	41.531	Tetraodon_nigroviridis
ENSUAMG00000016707	SRFBP1	83	90.323	ENSTTRG00000007726	SRFBP1	82	90.323	Tursiops_truncatus
ENSUAMG00000016707	SRFBP1	100	93.447	ENSUMAG00000018340	SRFBP1	96	93.447	Ursus_maritimus
ENSUAMG00000016707	SRFBP1	100	85.472	ENSVPAG00000005714	SRFBP1	96	85.472	Vicugna_pacos
ENSUAMG00000016707	SRFBP1	100	91.768	ENSVVUG00000019178	SRFBP1	100	91.768	Vulpes_vulpes
ENSUAMG00000016707	SRFBP1	100	44.313	ENSXETG00000004681	srfbp1	96	44.725	Xenopus_tropicalis
ENSUAMG00000016707	SRFBP1	74	67.647	ENSXCOG00000003410	-	96	38.641	Xiphophorus_couchianus
ENSUAMG00000016707	SRFBP1	74	67.647	ENSXMAG00000026251	-	84	37.888	Xiphophorus_maculatus