EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000016807 (Gene tree)
Gene ID: -
Gene Symbol: SFSWAP
Alias: SFRS8|SWAP
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 73502 bases
Position: chrLZNR01004257.1:12282-85783
Accession: 10790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000021531	DRY_EERY	PF09750.9	3.4e-32	1	1
ENSUAMP00000021521	DRY_EERY	PF09750.9	3.6e-32	1	1
ENSUAMP00000021531	Surp	PF01805.20	5.6e-27	1	2
ENSUAMP00000021531	Surp	PF01805.20	5.6e-27	2	2
ENSUAMP00000021521	Surp	PF01805.20	6.3e-27	1	2
ENSUAMP00000021521	Surp	PF01805.20	6.3e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000024054	SFSWAP-201	2931	-	ENSUAMP00000021521	976 (aa)	-	-
ENSUAMT00000024064	SFSWAP-202	2793	-	ENSUAMP00000021531	930 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000016807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000016807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000016807	SFSWAP	100	87.382	ENSG00000061936	SFSWAP	94	97.368	Homo_sapiens
ENSUAMG00000016807	SFSWAP	74	58.527	ENSAPOG00000005784	sfswap	69	80.952	Acanthochromis_polyacanthus
ENSUAMG00000016807	SFSWAP	100	95.820	ENSAMEG00000013818	SFSWAP	100	95.820	Ailuropoda_melanoleuca
ENSUAMG00000016807	SFSWAP	72	58.616	ENSAOCG00000016469	sfswap	97	49.543	Amphiprion_ocellaris
ENSUAMG00000016807	SFSWAP	72	59.072	ENSAPEG00000004965	sfswap	88	57.521	Amphiprion_percula
ENSUAMG00000016807	SFSWAP	78	81.818	ENSATEG00000021053	sfswap	97	49.058	Anabas_testudineus
ENSUAMG00000016807	SFSWAP	93	70.773	ENSACAG00000007220	SFSWAP	100	71.749	Anolis_carolinensis
ENSUAMG00000016807	SFSWAP	100	86.947	ENSANAG00000001518	SFSWAP	100	86.105	Aotus_nancymaae
ENSUAMG00000016807	SFSWAP	73	58.646	ENSACLG00000020159	sfswap	95	51.658	Astatotilapia_calliptera
ENSUAMG00000016807	SFSWAP	76	56.380	ENSAMXG00000008657	sfswap	98	52.870	Astyanax_mexicanus
ENSUAMG00000016807	SFSWAP	100	90.899	ENSBTAG00000000439	SFSWAP	100	90.476	Bos_taurus
ENSUAMG00000016807	SFSWAP	100	85.985	ENSCJAG00000003613	SFSWAP	100	85.880	Callithrix_jacchus
ENSUAMG00000016807	SFSWAP	100	94.362	ENSCAFG00000006625	SFSWAP	100	94.043	Canis_familiaris
ENSUAMG00000016807	SFSWAP	86	85.117	ENSCAFG00020011254	SFSWAP	99	84.653	Canis_lupus_dingo
ENSUAMG00000016807	SFSWAP	100	91.005	ENSCHIG00000008838	SFSWAP	100	90.688	Capra_hircus
ENSUAMG00000016807	SFSWAP	100	86.484	ENSTSYG00000010303	SFSWAP	100	87.328	Carlito_syrichta
ENSUAMG00000016807	SFSWAP	92	85.405	ENSCAPG00000004394	SFSWAP	96	84.721	Cavia_aperea
ENSUAMG00000016807	SFSWAP	100	86.196	ENSCPOG00000005280	SFSWAP	100	85.564	Cavia_porcellus
ENSUAMG00000016807	SFSWAP	100	87.355	ENSCCAG00000037255	SFSWAP	100	86.512	Cebus_capucinus
ENSUAMG00000016807	SFSWAP	100	87.658	ENSCATG00000031094	SFSWAP	100	87.447	Cercocebus_atys
ENSUAMG00000016807	SFSWAP	100	87.025	ENSCLAG00000008380	SFSWAP	100	86.603	Chinchilla_lanigera
ENSUAMG00000016807	SFSWAP	100	87.658	ENSCSAG00000001884	SFSWAP	100	87.447	Chlorocebus_sabaeus
ENSUAMG00000016807	SFSWAP	92	71.298	ENSCHOG00000003578	SFSWAP	100	70.273	Choloepus_hoffmanni
ENSUAMG00000016807	SFSWAP	100	70.493	ENSCPBG00000024757	SFSWAP	100	72.746	Chrysemys_picta_bellii
ENSUAMG00000016807	SFSWAP	100	87.553	ENSCANG00000036501	SFSWAP	100	87.342	Colobus_angolensis_palliatus
ENSUAMG00000016807	SFSWAP	100	80.639	ENSCGRG00001011284	Sfswap	100	84.372	Cricetulus_griseus_chok1gshd
ENSUAMG00000016807	SFSWAP	100	75.176	ENSCGRG00000017417	Sfswap	100	84.372	Cricetulus_griseus_crigri
ENSUAMG00000016807	SFSWAP	77	61.696	ENSCSEG00000003773	sfswap	84	59.012	Cynoglossus_semilaevis
ENSUAMG00000016807	SFSWAP	52	63.514	ENSCVAG00000001205	-	96	44.754	Cyprinodon_variegatus
ENSUAMG00000016807	SFSWAP	99	56.613	ENSDARG00000005980	sfswap	99	55.488	Danio_rerio
ENSUAMG00000016807	SFSWAP	100	84.100	ENSDNOG00000018742	SFSWAP	100	84.146	Dasypus_novemcinctus
ENSUAMG00000016807	SFSWAP	97	79.085	ENSDORG00000010352	Sfswap	99	78.626	Dipodomys_ordii
ENSUAMG00000016807	SFSWAP	61	38.690	FBgn0003638	su(w[a])	56	54.444	Drosophila_melanogaster
ENSUAMG00000016807	SFSWAP	77	91.000	ENSETEG00000016657	-	86	91.000	Echinops_telfairi
ENSUAMG00000016807	SFSWAP	83	38.487	ENSEBUG00000016748	SFSWAP	99	37.143	Eptatretus_burgeri
ENSUAMG00000016807	SFSWAP	100	91.746	ENSEASG00005016502	SFSWAP	100	91.534	Equus_asinus_asinus
ENSUAMG00000016807	SFSWAP	98	91.450	ENSECAG00000007657	SFSWAP	99	91.234	Equus_caballus
ENSUAMG00000016807	SFSWAP	86	73.267	ENSEEUG00000001713	SFSWAP	99	72.547	Erinaceus_europaeus
ENSUAMG00000016807	SFSWAP	100	54.002	ENSELUG00000010942	sfswap	100	65.394	Esox_lucius
ENSUAMG00000016807	SFSWAP	100	92.259	ENSFCAG00000010778	SFSWAP	100	92.153	Felis_catus
ENSUAMG00000016807	SFSWAP	100	74.871	ENSFALG00000009577	SFSWAP	96	76.165	Ficedula_albicollis
ENSUAMG00000016807	SFSWAP	100	86.555	ENSFDAG00000017235	SFSWAP	100	85.714	Fukomys_damarensis
ENSUAMG00000016807	SFSWAP	55	70.569	ENSGMOG00000009205	sfswap	76	72.241	Gadus_morhua
ENSUAMG00000016807	SFSWAP	79	60.469	ENSGAFG00000006272	sfswap	89	67.624	Gambusia_affinis
ENSUAMG00000016807	SFSWAP	79	70.588	ENSGACG00000017647	sfswap	99	54.672	Gasterosteus_aculeatus
ENSUAMG00000016807	SFSWAP	100	72.727	ENSGAGG00000002611	SFSWAP	100	73.476	Gopherus_agassizii
ENSUAMG00000016807	SFSWAP	100	86.751	ENSGGOG00000014877	SFSWAP	100	87.066	Gorilla_gorilla
ENSUAMG00000016807	SFSWAP	73	57.836	ENSHBUG00000005629	sfswap	54	66.220	Haplochromis_burtoni
ENSUAMG00000016807	SFSWAP	100	86.709	ENSHGLG00000019216	SFSWAP	100	86.287	Heterocephalus_glaber_female
ENSUAMG00000016807	SFSWAP	100	86.498	ENSHGLG00100019350	SFSWAP	100	86.076	Heterocephalus_glaber_male
ENSUAMG00000016807	SFSWAP	71	58.571	ENSHCOG00000009475	sfswap	97	50.924	Hippocampus_comes
ENSUAMG00000016807	SFSWAP	51	53.347	ENSIPUG00000010598	sfswap	97	56.386	Ictalurus_punctatus
ENSUAMG00000016807	SFSWAP	100	86.152	ENSSTOG00000000773	SFSWAP	100	85.941	Ictidomys_tridecemlineatus
ENSUAMG00000016807	SFSWAP	100	84.762	ENSJJAG00000006609	Sfswap	100	85.079	Jaculus_jaculus
ENSUAMG00000016807	SFSWAP	82	58.405	ENSKMAG00000013168	sfswap	86	58.310	Kryptolebias_marmoratus
ENSUAMG00000016807	SFSWAP	75	56.088	ENSLBEG00000010239	sfswap	76	57.453	Labrus_bergylta
ENSUAMG00000016807	SFSWAP	100	61.792	ENSLACG00000018678	SFSWAP	96	64.263	Latimeria_chalumnae
ENSUAMG00000016807	SFSWAP	99	58.918	ENSLOCG00000006202	sfswap	99	55.195	Lepisosteus_oculatus
ENSUAMG00000016807	SFSWAP	92	85.452	ENSLAFG00000014462	SFSWAP	100	85.452	Loxodonta_africana
ENSUAMG00000016807	SFSWAP	98	87.379	ENSMFAG00000037352	SFSWAP	100	84.331	Macaca_fascicularis
ENSUAMG00000016807	SFSWAP	100	87.447	ENSMMUG00000020343	SFSWAP	100	87.342	Macaca_mulatta
ENSUAMG00000016807	SFSWAP	100	87.447	ENSMNEG00000041002	SFSWAP	100	87.342	Macaca_nemestrina
ENSUAMG00000016807	SFSWAP	100	85.654	ENSMLEG00000035728	SFSWAP	100	85.338	Mandrillus_leucophaeus
ENSUAMG00000016807	SFSWAP	73	57.836	ENSMZEG00005017834	SFSWAP	54	66.220	Maylandia_zebra
ENSUAMG00000016807	SFSWAP	100	76.253	ENSMOCG00000014390	Sfswap	100	83.949	Microtus_ochrogaster
ENSUAMG00000016807	SFSWAP	99	75.612	ENSMODG00000015581	SFSWAP	99	73.973	Monodelphis_domestica
ENSUAMG00000016807	SFSWAP	72	59.748	ENSMALG00000012603	sfswap	97	52.414	Monopterus_albus
ENSUAMG00000016807	SFSWAP	100	77.555	MGP_CAROLIEiJ_G0027780	Sfswap	100	84.477	Mus_caroli
ENSUAMG00000016807	SFSWAP	100	84.884	ENSMUSG00000029439	Sfswap	100	84.583	Mus_musculus
ENSUAMG00000016807	SFSWAP	100	84.615	MGP_PahariEiJ_G0024360	Sfswap	94	91.228	Mus_pahari
ENSUAMG00000016807	SFSWAP	100	84.672	MGP_SPRETEiJ_G0028779	Sfswap	100	84.372	Mus_spretus
ENSUAMG00000016807	SFSWAP	100	94.149	ENSMPUG00000002218	SFSWAP	100	93.830	Mustela_putorius_furo
ENSUAMG00000016807	SFSWAP	90	80.937	ENSMLUG00000011296	SFSWAP	100	79.621	Myotis_lucifugus
ENSUAMG00000016807	SFSWAP	100	81.289	ENSNGAG00000018167	Sfswap	100	84.388	Nannospalax_galili
ENSUAMG00000016807	SFSWAP	75	58.522	ENSNBRG00000020857	sfswap	54	64.985	Neolamprologus_brichardi
ENSUAMG00000016807	SFSWAP	100	84.526	ENSNLEG00000008386	SFSWAP	100	84.737	Nomascus_leucogenys
ENSUAMG00000016807	SFSWAP	72	87.179	ENSMEUG00000009556	-	79	87.179	Notamacropus_eugenii
ENSUAMG00000016807	SFSWAP	96	84.521	ENSOPRG00000006983	-	93	81.890	Ochotona_princeps
ENSUAMG00000016807	SFSWAP	100	86.392	ENSODEG00000008020	SFSWAP	100	86.287	Octodon_degus
ENSUAMG00000016807	SFSWAP	96	52.755	ENSONIG00000003757	sfswap	92	57.180	Oreochromis_niloticus
ENSUAMG00000016807	SFSWAP	52	80.453	ENSOANG00000013861	SFSWAP	100	81.672	Ornithorhynchus_anatinus
ENSUAMG00000016807	SFSWAP	55	68.864	ENSOCUG00000002165	SFSWAP	100	82.025	Oryctolagus_cuniculus
ENSUAMG00000016807	SFSWAP	81	59.058	ENSORLG00000010983	sfswap	71	58.020	Oryzias_latipes
ENSUAMG00000016807	SFSWAP	81	59.058	ENSORLG00020010779	sfswap	71	58.020	Oryzias_latipes_hni
ENSUAMG00000016807	SFSWAP	81	59.429	ENSORLG00015023093	sfswap	86	58.203	Oryzias_latipes_hsok
ENSUAMG00000016807	SFSWAP	72	60.142	ENSOMEG00000022065	sfswap	88	58.699	Oryzias_melastigma
ENSUAMG00000016807	SFSWAP	100	90.074	ENSOARG00000014314	SFSWAP	100	89.968	Ovis_aries
ENSUAMG00000016807	SFSWAP	100	87.697	ENSPPAG00000036706	SFSWAP	100	87.382	Pan_paniscus
ENSUAMG00000016807	SFSWAP	100	88.396	ENSPPRG00000017318	SFSWAP	100	87.891	Panthera_pardus
ENSUAMG00000016807	SFSWAP	98	82.046	ENSPTIG00000004304	SFSWAP	99	81.175	Panthera_tigris_altaica
ENSUAMG00000016807	SFSWAP	100	87.802	ENSPTRG00000005640	SFSWAP	100	87.487	Pan_troglodytes
ENSUAMG00000016807	SFSWAP	100	87.658	ENSPANG00000019737	SFSWAP	100	87.447	Papio_anubis
ENSUAMG00000016807	SFSWAP	73	60.028	ENSPKIG00000008327	sfswap	100	54.040	Paramormyrops_kingsleyae
ENSUAMG00000016807	SFSWAP	62	67.913	ENSPSIG00000017807	SFSWAP	100	71.451	Pelodiscus_sinensis
ENSUAMG00000016807	SFSWAP	100	74.900	ENSPEMG00000001237	Sfswap	100	83.439	Peromyscus_maniculatus_bairdii
ENSUAMG00000016807	SFSWAP	99	78.602	ENSPCIG00000006062	SFSWAP	99	78.699	Phascolarctos_cinereus
ENSUAMG00000016807	SFSWAP	80	61.039	ENSPFOG00000019657	sfswap	89	66.667	Poecilia_formosa
ENSUAMG00000016807	SFSWAP	80	60.895	ENSPLAG00000008513	sfswap	89	66.667	Poecilia_latipinna
ENSUAMG00000016807	SFSWAP	80	61.039	ENSPMEG00000008716	sfswap	90	66.667	Poecilia_mexicana
ENSUAMG00000016807	SFSWAP	79	60.882	ENSPREG00000006692	sfswap	89	66.580	Poecilia_reticulata
ENSUAMG00000016807	SFSWAP	98	86.924	ENSPPYG00000005129	SFSWAP	100	86.710	Pongo_abelii
ENSUAMG00000016807	SFSWAP	57	90.625	ENSPCAG00000004977	-	65	90.625	Procavia_capensis
ENSUAMG00000016807	SFSWAP	92	89.456	ENSPVAG00000014918	SFSWAP	92	89.456	Pteropus_vampyrus
ENSUAMG00000016807	SFSWAP	73	57.143	ENSPNYG00000012660	sfswap	54	65.952	Pundamilia_nyererei
ENSUAMG00000016807	SFSWAP	76	56.161	ENSPNAG00000007073	sfswap	98	51.205	Pygocentrus_nattereri
ENSUAMG00000016807	SFSWAP	100	80.739	ENSRNOG00000000931	Sfswap	100	82.154	Rattus_norvegicus
ENSUAMG00000016807	SFSWAP	100	83.369	ENSRBIG00000036330	SFSWAP	100	83.157	Rhinopithecus_bieti
ENSUAMG00000016807	SFSWAP	100	87.658	ENSRROG00000032001	SFSWAP	100	87.236	Rhinopithecus_roxellana
ENSUAMG00000016807	SFSWAP	100	87.039	ENSSBOG00000026217	SFSWAP	100	86.196	Saimiri_boliviensis_boliviensis
ENSUAMG00000016807	SFSWAP	92	82.045	ENSSHAG00000014232	SFSWAP	100	82.386	Sarcophilus_harrisii
ENSUAMG00000016807	SFSWAP	96	57.631	ENSSFOG00015000766	sfswap	97	56.963	Scleropages_formosus
ENSUAMG00000016807	SFSWAP	71	58.890	ENSSMAG00000018718	sfswap	97	49.439	Scophthalmus_maximus
ENSUAMG00000016807	SFSWAP	76	57.979	ENSSLDG00000010835	sfswap	85	55.405	Seriola_lalandi_dorsalis
ENSUAMG00000016807	SFSWAP	78	91.000	ENSSARG00000000424	SFSWAP	85	91.000	Sorex_araneus
ENSUAMG00000016807	SFSWAP	86	72.661	ENSSPUG00000010272	SFSWAP	99	74.572	Sphenodon_punctatus
ENSUAMG00000016807	SFSWAP	100	89.968	ENSSSCG00000009744	SFSWAP	99	91.246	Sus_scrofa
ENSUAMG00000016807	SFSWAP	97	76.439	ENSTGUG00000004623	SFSWAP	99	75.978	Taeniopygia_guttata
ENSUAMG00000016807	SFSWAP	55	90.625	ENSTBEG00000004983	-	64	90.625	Tupaia_belangeri
ENSUAMG00000016807	SFSWAP	93	93.873	ENSTTRG00000013478	SFSWAP	92	93.627	Tursiops_truncatus
ENSUAMG00000016807	SFSWAP	90	91.795	ENSUMAG00000002957	SFSWAP	91	93.750	Ursus_maritimus
ENSUAMG00000016807	SFSWAP	56	96.124	ENSVPAG00000010479	-	66	96.124	Vicugna_pacos
ENSUAMG00000016807	SFSWAP	100	94.043	ENSVVUG00000010753	SFSWAP	100	93.723	Vulpes_vulpes
ENSUAMG00000016807	SFSWAP	97	61.648	ENSXETG00000009350	sfswap	93	65.960	Xenopus_tropicalis
ENSUAMG00000016807	SFSWAP	80	59.424	ENSXMAG00000009020	sfswap	55	66.580	Xiphophorus_maculatus