EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000016938 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 22469 bases
Position: chrLZNR01015050.1:14822-37290
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000021586	La	PF05383.17	4e-22	1	1
ENSUAMP00000021615	La	PF05383.17	4.7e-22	1	1
ENSUAMP00000021591	La	PF05383.17	7.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000024129	-	798	-	ENSUAMP00000021591	265 (aa)	-	-
ENSUAMT00000024123	-	954	-	ENSUAMP00000021586	317 (aa)	-	-
ENSUAMT00000024157	-	1017	-	ENSUAMP00000021615	338 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000016938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000016938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000016938	-	100	81.548	ENSG00000138709	LARP1B	100	81.791	Homo_sapiens
ENSUAMG00000016938	-	91	99.408	ENSAMEG00000002748	LARP1B	100	87.463	Ailuropoda_melanoleuca
ENSUAMG00000016938	-	98	69.277	ENSANAG00000034618	LARP1B	98	68.661	Aotus_nancymaae
ENSUAMG00000016938	-	98	80.967	ENSBTAG00000012135	LARP1B	63	81.818	Bos_taurus
ENSUAMG00000016938	-	91	95.266	ENSCJAG00000003338	LARP1B	100	82.687	Callithrix_jacchus
ENSUAMG00000016938	-	91	98.817	ENSCAFG00020018899	LARP1B	100	86.269	Canis_lupus_dingo
ENSUAMG00000016938	-	100	81.493	ENSCHIG00000023144	LARP1B	100	82.036	Capra_hircus
ENSUAMG00000016938	-	88	92.025	ENSTSYG00000002037	-	99	77.003	Carlito_syrichta
ENSUAMG00000016938	-	100	69.688	ENSCPOG00000034668	-	80	97.321	Cavia_porcellus
ENSUAMG00000016938	-	90	95.833	ENSCCAG00000021948	LARP1B	99	82.635	Cebus_capucinus
ENSUAMG00000016938	-	100	77.976	ENSCATG00000013541	LARP1B	100	78.507	Cercocebus_atys
ENSUAMG00000016938	-	90	89.881	ENSCLAG00000006448	-	100	77.612	Chinchilla_lanigera
ENSUAMG00000016938	-	100	79.931	ENSCANG00000026958	LARP1B	100	80.556	Colobus_angolensis_palliatus
ENSUAMG00000016938	-	91	94.675	ENSCGRG00001004660	-	100	80.597	Cricetulus_griseus_chok1gshd
ENSUAMG00000016938	-	91	94.083	ENSCGRG00000001914	-	100	80.299	Cricetulus_griseus_crigri
ENSUAMG00000016938	-	88	94.479	ENSDNOG00000018765	-	64	80.243	Dasypus_novemcinctus
ENSUAMG00000016938	-	90	98.810	ENSEASG00005018106	LARP1B	99	84.731	Equus_asinus_asinus
ENSUAMG00000016938	-	91	98.225	ENSFCAG00000014650	-	100	85.373	Felis_catus
ENSUAMG00000016938	-	100	81.548	ENSGGOG00000015900	LARP1B	100	81.791	Gorilla_gorilla
ENSUAMG00000016938	-	91	88.757	ENSHGLG00000006728	-	99	76.106	Heterocephalus_glaber_female
ENSUAMG00000016938	-	98	70.219	ENSHGLG00000013922	-	96	70.347	Heterocephalus_glaber_female
ENSUAMG00000016938	-	91	88.757	ENSHGLG00100014041	-	99	76.276	Heterocephalus_glaber_male
ENSUAMG00000016938	-	98	70.219	ENSHGLG00100016491	-	96	70.347	Heterocephalus_glaber_male
ENSUAMG00000016938	-	100	70.405	ENSSTOG00000034510	-	93	69.817	Ictidomys_tridecemlineatus
ENSUAMG00000016938	-	99	75.394	ENSSTOG00000021917	-	94	78.438	Ictidomys_tridecemlineatus
ENSUAMG00000016938	-	91	95.858	ENSSTOG00000008596	-	100	83.036	Ictidomys_tridecemlineatus
ENSUAMG00000016938	-	89	64.591	ENSSTOG00000033183	-	100	66.148	Ictidomys_tridecemlineatus
ENSUAMG00000016938	-	99	78.209	ENSJJAG00000022360	Larp1b	99	78.443	Jaculus_jaculus
ENSUAMG00000016938	-	98	59.940	ENSLACG00000015247	LARP1B	85	60.843	Latimeria_chalumnae
ENSUAMG00000016938	-	91	95.882	ENSLAFG00000008473	-	99	83.636	Loxodonta_africana
ENSUAMG00000016938	-	100	81.250	ENSMFAG00000002218	LARP1B	100	81.791	Macaca_fascicularis
ENSUAMG00000016938	-	100	70.632	ENSMFAG00000003306	-	93	90.345	Macaca_fascicularis
ENSUAMG00000016938	-	100	81.250	ENSMMUG00000021347	LARP1B	100	81.791	Macaca_mulatta
ENSUAMG00000016938	-	100	71.536	ENSMNEG00000027747	-	94	90.909	Macaca_nemestrina
ENSUAMG00000016938	-	75	48.375	ENSMZEG00005002545	larp1b	56	48.014	Maylandia_zebra
ENSUAMG00000016938	-	91	92.899	ENSMAUG00000007879	-	100	79.701	Mesocricetus_auratus
ENSUAMG00000016938	-	91	97.633	ENSMICG00000036111	LARP1B	100	84.478	Microcebus_murinus
ENSUAMG00000016938	-	98	75.887	ENSMICG00000037883	-	96	72.515	Microcebus_murinus
ENSUAMG00000016938	-	97	63.208	ENSMICG00000028052	-	63	64.353	Microcebus_murinus
ENSUAMG00000016938	-	78	81.643	ENSMOCG00000001490	Larp1b	95	80.682	Microtus_ochrogaster
ENSUAMG00000016938	-	91	91.716	MGP_CAROLIEiJ_G0024962	Larp1b	100	79.701	Mus_caroli
ENSUAMG00000016938	-	91	94.083	ENSMUSG00000025762	Larp1b	100	80.896	Mus_musculus
ENSUAMG00000016938	-	91	94.083	MGP_PahariEiJ_G0026403	Larp1b	100	80.000	Mus_pahari
ENSUAMG00000016938	-	91	94.083	MGP_SPRETEiJ_G0025897	Larp1b	100	80.896	Mus_spretus
ENSUAMG00000016938	-	100	81.250	ENSNLEG00000013819	LARP1B	100	81.493	Nomascus_leucogenys
ENSUAMG00000016938	-	90	90.476	ENSODEG00000001292	-	100	78.144	Octodon_degus
ENSUAMG00000016938	-	100	81.250	ENSPPAG00000030439	LARP1B	100	81.493	Pan_paniscus
ENSUAMG00000016938	-	91	98.225	ENSPPRG00000002743	-	100	85.373	Panthera_pardus
ENSUAMG00000016938	-	91	98.225	ENSPTIG00000011225	LARP1B	100	85.373	Panthera_tigris_altaica
ENSUAMG00000016938	-	100	80.952	ENSPTRG00000016437	LARP1B	100	81.194	Pan_troglodytes
ENSUAMG00000016938	-	100	80.952	ENSPANG00000012488	LARP1B	100	81.493	Papio_anubis
ENSUAMG00000016938	-	90	89.349	ENSPCIG00000026516	LARP1B	92	74.138	Phascolarctos_cinereus
ENSUAMG00000016938	-	96	47.564	ENSPFOG00000022837	-	52	46.111	Poecilia_formosa
ENSUAMG00000016938	-	83	47.419	ENSPREG00000005955	-	98	47.742	Poecilia_reticulata
ENSUAMG00000016938	-	91	97.041	ENSPCOG00000021874	LARP1B	100	83.881	Propithecus_coquereli
ENSUAMG00000016938	-	100	81.548	ENSRNOG00000038366	Larp1b	100	82.090	Rattus_norvegicus
ENSUAMG00000016938	-	100	73.887	ENSRBIG00000038568	-	96	72.807	Rhinopithecus_bieti
ENSUAMG00000016938	-	88	95.706	ENSRBIG00000039982	-	100	79.403	Rhinopithecus_bieti
ENSUAMG00000016938	-	100	81.548	ENSRROG00000030771	LARP1B	100	81.791	Rhinopithecus_roxellana
ENSUAMG00000016938	-	100	74.216	ENSRROG00000038525	-	96	74.740	Rhinopithecus_roxellana
ENSUAMG00000016938	-	98	83.067	ENSSSCG00000034280	LARP1B	63	83.283	Sus_scrofa
ENSUAMG00000016938	-	99	57.519	ENSSSCG00000040491	-	94	70.652	Sus_scrofa
ENSUAMG00000016938	-	88	98.160	ENSVVUG00000011307	LARP1B	65	86.018	Vulpes_vulpes