EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000017197 (Gene tree)
Gene ID: -
Gene Symbol: PUS1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 10093 bases
Position: chrLZNR01004257.1:170275-180367
Accession: 15508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000021862	PseudoU_synth_1	PF01416.20	3e-14	1	1
ENSUAMP00000021864	PseudoU_synth_1	PF01416.20	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000024442	PUS1-202	1611	-	ENSUAMP00000021864	394 (aa)	-	-
ENSUAMT00000024440	PUS1-201	1696	-	ENSUAMP00000021862	394 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000017197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000017197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000017197	PUS1	100	83.417	ENSG00000177192	PUS1	100	84.156	Homo_sapiens
ENSUAMG00000017197	PUS1	88	67.898	ENSAPOG00000007254	pus1	84	67.898	Acanthochromis_polyacanthus
ENSUAMG00000017197	PUS1	100	93.655	ENSAMEG00000013715	PUS1	93	93.655	Ailuropoda_melanoleuca
ENSUAMG00000017197	PUS1	86	70.760	ENSACIG00000009169	pus1	83	70.760	Amphilophus_citrinellus
ENSUAMG00000017197	PUS1	95	66.400	ENSAOCG00000022207	pus1	87	66.400	Amphiprion_ocellaris
ENSUAMG00000017197	PUS1	95	66.400	ENSAPEG00000006039	pus1	93	66.400	Amphiprion_percula
ENSUAMG00000017197	PUS1	88	68.169	ENSATEG00000020688	pus1	91	68.169	Anabas_testudineus
ENSUAMG00000017197	PUS1	92	74.863	ENSACAG00000007367	PUS1	97	74.863	Anolis_carolinensis
ENSUAMG00000017197	PUS1	81	86.196	ENSANAG00000036192	PUS1	100	86.196	Aotus_nancymaae
ENSUAMG00000017197	PUS1	86	70.175	ENSACLG00000020868	pus1	88	70.175	Astatotilapia_calliptera
ENSUAMG00000017197	PUS1	88	69.741	ENSAMXG00000008710	pus1	81	69.741	Astyanax_mexicanus
ENSUAMG00000017197	PUS1	100	89.848	ENSBTAG00000012990	PUS1	99	89.848	Bos_taurus
ENSUAMG00000017197	PUS1	87	38.398	WBGene00004248	pus-1	86	38.398	Caenorhabditis_elegans
ENSUAMG00000017197	PUS1	64	87.402	ENSCJAG00000003720	PUS1	73	86.142	Callithrix_jacchus
ENSUAMG00000017197	PUS1	100	91.457	ENSCAFG00000006429	PUS1	100	91.457	Canis_familiaris
ENSUAMG00000017197	PUS1	100	91.457	ENSCAFG00020010737	PUS1	92	91.457	Canis_lupus_dingo
ENSUAMG00000017197	PUS1	100	89.086	ENSCHIG00000000487	PUS1	99	89.086	Capra_hircus
ENSUAMG00000017197	PUS1	92	85.637	ENSTSYG00000032605	PUS1	100	85.637	Carlito_syrichta
ENSUAMG00000017197	PUS1	76	89.933	ENSCAPG00000006421	PUS1	99	86.875	Cavia_aperea
ENSUAMG00000017197	PUS1	96	81.890	ENSCPOG00000001027	PUS1	92	81.156	Cavia_porcellus
ENSUAMG00000017197	PUS1	100	83.920	ENSCCAG00000015879	PUS1	95	82.621	Cebus_capucinus
ENSUAMG00000017197	PUS1	100	85.279	ENSCATG00000032870	PUS1	92	85.279	Cercocebus_atys
ENSUAMG00000017197	PUS1	91	84.722	ENSCLAG00000011689	PUS1	90	82.124	Chinchilla_lanigera
ENSUAMG00000017197	PUS1	100	85.025	ENSCSAG00000001879	PUS1	92	85.025	Chlorocebus_sabaeus
ENSUAMG00000017197	PUS1	79	82.372	ENSCPBG00000024715	PUS1	89	82.372	Chrysemys_picta_bellii
ENSUAMG00000017197	PUS1	85	43.491	ENSCING00000009426	-	90	43.491	Ciona_intestinalis
ENSUAMG00000017197	PUS1	81	44.514	ENSCSAVG00000003751	-	66	44.514	Ciona_savignyi
ENSUAMG00000017197	PUS1	100	76.131	ENSCANG00000035561	PUS1	99	76.131	Colobus_angolensis_palliatus
ENSUAMG00000017197	PUS1	100	81.500	ENSCGRG00001019592	Pus1	93	81.500	Cricetulus_griseus_chok1gshd
ENSUAMG00000017197	PUS1	100	81.500	ENSCGRG00000004048	Pus1	100	81.500	Cricetulus_griseus_crigri
ENSUAMG00000017197	PUS1	87	68.314	ENSCSEG00000003629	pus1	82	68.314	Cynoglossus_semilaevis
ENSUAMG00000017197	PUS1	88	69.628	ENSCVAG00000001265	pus1	84	69.628	Cyprinodon_variegatus
ENSUAMG00000017197	PUS1	88	66.087	ENSDARG00000045562	pus1	99	65.468	Danio_rerio
ENSUAMG00000017197	PUS1	99	76.441	ENSDNOG00000045576	PUS1	98	83.540	Dasypus_novemcinctus
ENSUAMG00000017197	PUS1	81	89.688	ENSDORG00000011455	Pus1	98	89.688	Dipodomys_ordii
ENSUAMG00000017197	PUS1	92	44.658	FBgn0038811	PUS1	88	44.658	Drosophila_melanogaster
ENSUAMG00000017197	PUS1	94	77.067	ENSETEG00000019160	PUS1	95	76.289	Echinops_telfairi
ENSUAMG00000017197	PUS1	91	40.351	ENSEBUG00000000368	-	73	40.351	Eptatretus_burgeri
ENSUAMG00000017197	PUS1	100	89.552	ENSEASG00005016535	PUS1	92	89.552	Equus_asinus_asinus
ENSUAMG00000017197	PUS1	100	89.801	ENSECAG00000006965	PUS1	100	89.801	Equus_caballus
ENSUAMG00000017197	PUS1	86	71.345	ENSELUG00000010424	pus1	87	71.345	Esox_lucius
ENSUAMG00000017197	PUS1	100	90.355	ENSFCAG00000010780	PUS1	92	90.355	Felis_catus
ENSUAMG00000017197	PUS1	93	76.757	ENSFALG00000008273	PUS1	87	76.757	Ficedula_albicollis
ENSUAMG00000017197	PUS1	93	82.842	ENSFDAG00000012518	PUS1	94	80.612	Fukomys_damarensis
ENSUAMG00000017197	PUS1	87	69.653	ENSFHEG00000010504	pus1	84	69.653	Fundulus_heteroclitus
ENSUAMG00000017197	PUS1	87	67.930	ENSGMOG00000008143	pus1	88	67.930	Gadus_morhua
ENSUAMG00000017197	PUS1	92	77.657	ENSGALG00000002354	PUS1	90	77.657	Gallus_gallus
ENSUAMG00000017197	PUS1	87	69.653	ENSGAFG00000006578	pus1	83	69.653	Gambusia_affinis
ENSUAMG00000017197	PUS1	90	67.887	ENSGACG00000017566	pus1	91	67.887	Gasterosteus_aculeatus
ENSUAMG00000017197	PUS1	79	82.581	ENSGAGG00000016730	-	90	82.372	Gopherus_agassizii
ENSUAMG00000017197	PUS1	100	83.668	ENSGGOG00000009178	PUS1	93	83.668	Gorilla_gorilla
ENSUAMG00000017197	PUS1	86	70.468	ENSHBUG00000001316	pus1	87	70.468	Haplochromis_burtoni
ENSUAMG00000017197	PUS1	93	81.250	ENSHGLG00000016086	PUS1	99	78.680	Heterocephalus_glaber_female
ENSUAMG00000017197	PUS1	93	80.978	ENSHGLG00100019362	PUS1	99	78.173	Heterocephalus_glaber_male
ENSUAMG00000017197	PUS1	87	69.388	ENSHCOG00000014288	pus1	79	69.388	Hippocampus_comes
ENSUAMG00000017197	PUS1	88	71.884	ENSIPUG00000010387	pus1	87	71.884	Ictalurus_punctatus
ENSUAMG00000017197	PUS1	99	84.872	ENSSTOG00000011245	PUS1	91	84.264	Ictidomys_tridecemlineatus
ENSUAMG00000017197	PUS1	100	80.750	ENSJJAG00000000088	Pus1	93	80.750	Jaculus_jaculus
ENSUAMG00000017197	PUS1	87	66.763	ENSKMAG00000012702	pus1	83	66.763	Kryptolebias_marmoratus
ENSUAMG00000017197	PUS1	87	68.300	ENSLBEG00000002845	pus1	85	68.300	Labrus_bergylta
ENSUAMG00000017197	PUS1	81	56.698	ENSLACG00000016044	-	97	56.698	Latimeria_chalumnae
ENSUAMG00000017197	PUS1	89	74.722	ENSLACG00000018598	PUS1	90	74.722	Latimeria_chalumnae
ENSUAMG00000017197	PUS1	88	77.522	ENSLOCG00000006127	pus1	88	77.522	Lepisosteus_oculatus
ENSUAMG00000017197	PUS1	92	81.044	ENSLAFG00000028731	PUS1	98	81.044	Loxodonta_africana
ENSUAMG00000017197	PUS1	100	85.279	ENSMFAG00000041194	PUS1	98	85.279	Macaca_fascicularis
ENSUAMG00000017197	PUS1	98	85.751	ENSMMUG00000031463	PUS1	99	85.714	Macaca_mulatta
ENSUAMG00000017197	PUS1	100	85.533	ENSMNEG00000002814	PUS1	92	85.533	Macaca_nemestrina
ENSUAMG00000017197	PUS1	82	89.130	ENSMLEG00000043560	PUS1	98	89.375	Mandrillus_leucophaeus
ENSUAMG00000017197	PUS1	88	66.479	ENSMAMG00000007371	pus1	84	66.479	Mastacembelus_armatus
ENSUAMG00000017197	PUS1	86	70.468	ENSMZEG00005017746	pus1	81	70.468	Maylandia_zebra
ENSUAMG00000017197	PUS1	77	84.488	ENSMGAG00000001958	PUS1	92	84.488	Meleagris_gallopavo
ENSUAMG00000017197	PUS1	56	31.513	ENSMGAG00000000851	PUS3	57	31.513	Meleagris_gallopavo
ENSUAMG00000017197	PUS1	100	81.407	ENSMAUG00000001482	Pus1	92	81.407	Mesocricetus_auratus
ENSUAMG00000017197	PUS1	99	84.833	ENSMICG00000030980	PUS1	96	84.833	Microcebus_murinus
ENSUAMG00000017197	PUS1	100	82.915	ENSMOCG00000022311	Pus1	92	82.915	Microtus_ochrogaster
ENSUAMG00000017197	PUS1	91	67.218	ENSMMOG00000021022	pus1	93	67.218	Mola_mola
ENSUAMG00000017197	PUS1	95	77.005	ENSMODG00000015551	PUS1	84	78.342	Monodelphis_domestica
ENSUAMG00000017197	PUS1	87	67.930	ENSMALG00000013202	pus1	83	67.836	Monopterus_albus
ENSUAMG00000017197	PUS1	100	82.412	MGP_CAROLIEiJ_G0027551	Pus1	99	82.412	Mus_caroli
ENSUAMG00000017197	PUS1	100	82.412	ENSMUSG00000029507	Pus1	99	82.412	Mus_musculus
ENSUAMG00000017197	PUS1	100	82.412	MGP_PahariEiJ_G0024133	Pus1	99	82.412	Mus_pahari
ENSUAMG00000017197	PUS1	100	82.412	MGP_SPRETEiJ_G0028549	Pus1	99	82.412	Mus_spretus
ENSUAMG00000017197	PUS1	100	92.893	ENSMPUG00000002314	PUS1	100	92.893	Mustela_putorius_furo
ENSUAMG00000017197	PUS1	90	86.777	ENSMLUG00000015790	PUS1	99	86.777	Myotis_lucifugus
ENSUAMG00000017197	PUS1	100	82.741	ENSNGAG00000012976	Pus1	91	82.741	Nannospalax_galili
ENSUAMG00000017197	PUS1	86	70.175	ENSNBRG00000020502	pus1	92	70.175	Neolamprologus_brichardi
ENSUAMG00000017197	PUS1	94	84.574	ENSNLEG00000008505	PUS1	100	88.013	Nomascus_leucogenys
ENSUAMG00000017197	PUS1	88	71.758	ENSMEUG00000002825	PUS1	93	71.758	Notamacropus_eugenii
ENSUAMG00000017197	PUS1	96	75.526	ENSOPRG00000002701	-	99	75.526	Ochotona_princeps
ENSUAMG00000017197	PUS1	100	79.188	ENSODEG00000008248	PUS1	98	81.365	Octodon_degus
ENSUAMG00000017197	PUS1	86	69.164	ENSONIG00000003803	pus1	86	72.368	Oreochromis_niloticus
ENSUAMG00000017197	PUS1	88	79.539	ENSOANG00000010619	PUS1	87	74.674	Ornithorhynchus_anatinus
ENSUAMG00000017197	PUS1	94	87.131	ENSOCUG00000007310	PUS1	84	86.563	Oryctolagus_cuniculus
ENSUAMG00000017197	PUS1	90	68.347	ENSORLG00000010787	pus1	85	68.347	Oryzias_latipes
ENSUAMG00000017197	PUS1	90	68.908	ENSORLG00020011483	pus1	85	68.908	Oryzias_latipes_hni
ENSUAMG00000017197	PUS1	90	68.908	ENSORLG00015023012	pus1	91	68.908	Oryzias_latipes_hsok
ENSUAMG00000017197	PUS1	90	68.347	ENSOMEG00000022655	pus1	83	68.347	Oryzias_melastigma
ENSUAMG00000017197	PUS1	96	86.614	ENSOGAG00000008720	PUS1	99	86.614	Otolemur_garnettii
ENSUAMG00000017197	PUS1	100	89.086	ENSOARG00000013316	PUS1	91	89.086	Ovis_aries
ENSUAMG00000017197	PUS1	100	83.668	ENSPPAG00000040971	PUS1	93	83.668	Pan_paniscus
ENSUAMG00000017197	PUS1	100	90.863	ENSPPRG00000015456	PUS1	100	90.863	Panthera_pardus
ENSUAMG00000017197	PUS1	87	93.003	ENSPTIG00000004201	PUS1	92	92.113	Panthera_tigris_altaica
ENSUAMG00000017197	PUS1	100	83.417	ENSPTRG00000005643	PUS1	93	83.417	Pan_troglodytes
ENSUAMG00000017197	PUS1	100	85.279	ENSPANG00000000376	PUS1	92	85.604	Papio_anubis
ENSUAMG00000017197	PUS1	92	68.937	ENSPKIG00000019369	pus1	83	68.937	Paramormyrops_kingsleyae
ENSUAMG00000017197	PUS1	96	74.803	ENSPSIG00000016432	PUS1	87	74.803	Pelodiscus_sinensis
ENSUAMG00000017197	PUS1	89	68.555	ENSPMGG00000004522	pus1	92	68.555	Periophthalmus_magnuspinnatus
ENSUAMG00000017197	PUS1	100	82.663	ENSPEMG00000013448	Pus1	92	82.663	Peromyscus_maniculatus_bairdii
ENSUAMG00000017197	PUS1	83	60.366	ENSPMAG00000004636	pus1	99	60.366	Petromyzon_marinus
ENSUAMG00000017197	PUS1	67	79.623	ENSPCIG00000022609	-	63	79.623	Phascolarctos_cinereus
ENSUAMG00000017197	PUS1	88	68.768	ENSPFOG00000019669	pus1	84	68.768	Poecilia_formosa
ENSUAMG00000017197	PUS1	88	68.768	ENSPLAG00000007185	pus1	84	68.768	Poecilia_latipinna
ENSUAMG00000017197	PUS1	88	68.768	ENSPLAG00000002692	-	84	68.768	Poecilia_latipinna
ENSUAMG00000017197	PUS1	88	68.768	ENSPMEG00000006038	pus1	87	68.768	Poecilia_mexicana
ENSUAMG00000017197	PUS1	88	68.768	ENSPMEG00000011115	PUS1	85	68.768	Poecilia_mexicana
ENSUAMG00000017197	PUS1	88	68.481	ENSPREG00000007231	pus1	92	70.783	Poecilia_reticulata
ENSUAMG00000017197	PUS1	100	82.663	ENSPPYG00000005132	PUS1	93	82.663	Pongo_abelii
ENSUAMG00000017197	PUS1	65	81.569	ENSPCAG00000009110	-	62	81.569	Procavia_capensis
ENSUAMG00000017197	PUS1	100	77.136	ENSPCOG00000015595	PUS1	99	77.136	Propithecus_coquereli
ENSUAMG00000017197	PUS1	86	70.175	ENSPNYG00000013571	pus1	81	70.175	Pundamilia_nyererei
ENSUAMG00000017197	PUS1	87	71.221	ENSPNAG00000003938	pus1	82	71.221	Pygocentrus_nattereri
ENSUAMG00000017197	PUS1	100	81.407	ENSRNOG00000037500	Pus1	92	81.407	Rattus_norvegicus
ENSUAMG00000017197	PUS1	100	84.422	ENSRBIG00000043177	PUS1	99	84.422	Rhinopithecus_bieti
ENSUAMG00000017197	PUS1	100	83.920	ENSRROG00000039744	PUS1	93	83.920	Rhinopithecus_roxellana
ENSUAMG00000017197	PUS1	76	31.492	YGL063W	-	95	31.492	Saccharomyces_cerevisiae
ENSUAMG00000017197	PUS1	83	44.697	YPL212C	-	60	44.697	Saccharomyces_cerevisiae
ENSUAMG00000017197	PUS1	100	84.422	ENSSBOG00000023593	PUS1	99	84.422	Saimiri_boliviensis_boliviensis
ENSUAMG00000017197	PUS1	98	75.064	ENSSHAG00000013193	PUS1	91	76.738	Sarcophilus_harrisii
ENSUAMG00000017197	PUS1	89	73.743	ENSSFOG00015003463	pus1	84	71.582	Scleropages_formosus
ENSUAMG00000017197	PUS1	86	69.298	ENSSMAG00000019075	pus1	90	64.550	Scophthalmus_maximus
ENSUAMG00000017197	PUS1	86	70.468	ENSSDUG00000007102	pus1	81	70.468	Seriola_dumerili
ENSUAMG00000017197	PUS1	86	69.883	ENSSLDG00000022850	pus1	81	69.883	Seriola_lalandi_dorsalis
ENSUAMG00000017197	PUS1	77	79.470	ENSSARG00000008367	PUS1	98	79.470	Sorex_araneus
ENSUAMG00000017197	PUS1	92	76.438	ENSSPUG00000010009	PUS1	91	76.438	Sphenodon_punctatus
ENSUAMG00000017197	PUS1	91	66.944	ENSSPAG00000006272	pus1	91	66.944	Stegastes_partitus
ENSUAMG00000017197	PUS1	100	88.750	ENSSSCG00000009741	PUS1	100	88.750	Sus_scrofa
ENSUAMG00000017197	PUS1	83	82.927	ENSTGUG00000008068	PUS1	99	82.927	Taeniopygia_guttata
ENSUAMG00000017197	PUS1	91	67.500	ENSTRUG00000002198	pus1	92	67.500	Takifugu_rubripes
ENSUAMG00000017197	PUS1	90	66.667	ENSTNIG00000003942	pus1	91	66.944	Tetraodon_nigroviridis
ENSUAMG00000017197	PUS1	100	87.940	ENSTTRG00000000632	PUS1	94	87.940	Tursiops_truncatus
ENSUAMG00000017197	PUS1	91	99.444	ENSUMAG00000002831	PUS1	100	99.398	Ursus_maritimus
ENSUAMG00000017197	PUS1	98	93.005	ENSVVUG00000004199	PUS1	89	93.005	Vulpes_vulpes
ENSUAMG00000017197	PUS1	81	49.221	ENSXETG00000033640	-	100	49.221	Xenopus_tropicalis
ENSUAMG00000017197	PUS1	86	74.926	ENSXETG00000002030	pus1	85	74.926	Xenopus_tropicalis
ENSUAMG00000017197	PUS1	88	69.054	ENSXCOG00000004722	pus1	90	69.054	Xiphophorus_couchianus
ENSUAMG00000017197	PUS1	88	68.768	ENSXMAG00000000988	pus1	84	68.768	Xiphophorus_maculatus