EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000017251 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 20524 bases
Position: chrLZNR01008521.1:1982-22505
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000021923	TRM13	PF05206.14	2e-91	1	1
ENSUAMP00000021923	zf-U11-48K	PF05253.12	3.2e-09	1	1
ENSUAMP00000021923	zf-TRM13_CCCH	PF11722.8	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000024512	TRMT13-201	1395	-	ENSUAMP00000021923	464 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000017251's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000017251's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000017251	TRMT13	100	85.031	ENSG00000122435	TRMT13	99	88.889	Homo_sapiens
ENSUAMG00000017251	TRMT13	95	47.305	ENSAPOG00000015131	trmt13	99	47.581	Acanthochromis_polyacanthus
ENSUAMG00000017251	TRMT13	100	92.100	ENSAMEG00000008917	TRMT13	100	92.100	Ailuropoda_melanoleuca
ENSUAMG00000017251	TRMT13	95	50.959	ENSACIG00000005804	trmt13	94	54.237	Amphilophus_citrinellus
ENSUAMG00000017251	TRMT13	95	47.705	ENSAOCG00000023585	trmt13	99	47.705	Amphiprion_ocellaris
ENSUAMG00000017251	TRMT13	95	47.705	ENSAPEG00000004025	trmt13	99	47.705	Amphiprion_percula
ENSUAMG00000017251	TRMT13	99	50.309	ENSATEG00000006597	trmt13	99	50.309	Anabas_testudineus
ENSUAMG00000017251	TRMT13	87	65.741	ENSAPLG00000014924	TRMT13	99	65.741	Anas_platyrhynchos
ENSUAMG00000017251	TRMT13	98	61.441	ENSACAG00000003498	TRMT13	99	61.441	Anolis_carolinensis
ENSUAMG00000017251	TRMT13	100	85.031	ENSANAG00000019525	TRMT13	100	89.908	Aotus_nancymaae
ENSUAMG00000017251	TRMT13	95	51.717	ENSACLG00000020018	trmt13	98	51.717	Astatotilapia_calliptera
ENSUAMG00000017251	TRMT13	95	52.248	ENSAMXG00000017963	trmt13	97	53.191	Astyanax_mexicanus
ENSUAMG00000017251	TRMT13	100	85.655	ENSBTAG00000015781	TRMT13	100	85.655	Bos_taurus
ENSUAMG00000017251	TRMT13	100	84.310	ENSCJAG00000000200	TRMT13	99	89.908	Callithrix_jacchus
ENSUAMG00000017251	TRMT13	68	94.268	ENSCAFG00000020021	TRMT13	99	94.268	Canis_familiaris
ENSUAMG00000017251	TRMT13	55	85.455	ENSCAFG00020011572	TRMT13	95	85.455	Canis_lupus_dingo
ENSUAMG00000017251	TRMT13	100	85.447	ENSCHIG00000015395	TRMT13	100	85.447	Capra_hircus
ENSUAMG00000017251	TRMT13	98	75.105	ENSTSYG00000010811	TRMT13	98	87.879	Carlito_syrichta
ENSUAMG00000017251	TRMT13	74	65.896	ENSCAPG00000009085	TRMT13	100	68.786	Cavia_aperea
ENSUAMG00000017251	TRMT13	100	81.913	ENSCPOG00000000694	TRMT13	100	81.913	Cavia_porcellus
ENSUAMG00000017251	TRMT13	100	85.031	ENSCCAG00000023772	TRMT13	100	88.991	Cebus_capucinus
ENSUAMG00000017251	TRMT13	100	84.615	ENSCATG00000033556	TRMT13	100	88.991	Cercocebus_atys
ENSUAMG00000017251	TRMT13	88	77.752	ENSCLAG00000008220	TRMT13	100	78.220	Chinchilla_lanigera
ENSUAMG00000017251	TRMT13	100	85.239	ENSCSAG00000001506	TRMT13	100	85.239	Chlorocebus_sabaeus
ENSUAMG00000017251	TRMT13	100	67.888	ENSCPBG00000026671	TRMT13	100	67.888	Chrysemys_picta_bellii
ENSUAMG00000017251	TRMT13	100	85.447	ENSCANG00000034659	TRMT13	100	89.908	Colobus_angolensis_palliatus
ENSUAMG00000017251	TRMT13	99	80.083	ENSCGRG00001021601	Trmt13	99	80.083	Cricetulus_griseus_chok1gshd
ENSUAMG00000017251	TRMT13	55	82.101	ENSCGRG00000000093	-	99	82.101	Cricetulus_griseus_crigri
ENSUAMG00000017251	TRMT13	95	48.661	ENSCSEG00000000591	trmt13	97	48.661	Cynoglossus_semilaevis
ENSUAMG00000017251	TRMT13	95	47.569	ENSCVAG00000017342	trmt13	93	47.992	Cyprinodon_variegatus
ENSUAMG00000017251	TRMT13	95	54.545	ENSDARG00000102846	trmt13	96	54.545	Danio_rerio
ENSUAMG00000017251	TRMT13	55	80.435	ENSDNOG00000001710	TRMT13	84	80.435	Dasypus_novemcinctus
ENSUAMG00000017251	TRMT13	100	81.913	ENSDORG00000015808	Trmt13	99	81.913	Dipodomys_ordii
ENSUAMG00000017251	TRMT13	96	30.992	FBgn0037435	CG18048	95	30.992	Drosophila_melanogaster
ENSUAMG00000017251	TRMT13	99	74.739	ENSETEG00000005819	TRMT13	99	74.739	Echinops_telfairi
ENSUAMG00000017251	TRMT13	95	45.376	ENSEBUG00000014444	trmt13	96	45.119	Eptatretus_burgeri
ENSUAMG00000017251	TRMT13	100	87.110	ENSEASG00005015918	TRMT13	100	87.110	Equus_asinus_asinus
ENSUAMG00000017251	TRMT13	100	86.694	ENSECAG00000022626	TRMT13	100	86.694	Equus_caballus
ENSUAMG00000017251	TRMT13	78	79.688	ENSEEUG00000000294	TRMT13	80	79.688	Erinaceus_europaeus
ENSUAMG00000017251	TRMT13	98	53.895	ENSELUG00000003803	trmt13	99	53.445	Esox_lucius
ENSUAMG00000017251	TRMT13	100	87.526	ENSFCAG00000030618	TRMT13	100	94.495	Felis_catus
ENSUAMG00000017251	TRMT13	99	63.180	ENSFALG00000002424	TRMT13	99	63.180	Ficedula_albicollis
ENSUAMG00000017251	TRMT13	99	82.983	ENSFDAG00000006342	TRMT13	99	82.983	Fukomys_damarensis
ENSUAMG00000017251	TRMT13	76	51.366	ENSFHEG00000022954	trmt13	97	50.131	Fundulus_heteroclitus
ENSUAMG00000017251	TRMT13	94	49.773	ENSGMOG00000013223	trmt13	100	50.227	Gadus_morhua
ENSUAMG00000017251	TRMT13	95	63.319	ENSGALG00000005290	TRMT13	96	63.399	Gallus_gallus
ENSUAMG00000017251	TRMT13	74	48.378	ENSGAFG00000001577	trmt13	81	48.378	Gambusia_affinis
ENSUAMG00000017251	TRMT13	95	49.460	ENSGACG00000013428	trmt13	97	49.892	Gasterosteus_aculeatus
ENSUAMG00000017251	TRMT13	100	67.427	ENSGAGG00000023303	TRMT13	100	67.427	Gopherus_agassizii
ENSUAMG00000017251	TRMT13	100	84.823	ENSGGOG00000005616	TRMT13	99	87.963	Gorilla_gorilla
ENSUAMG00000017251	TRMT13	95	51.931	ENSHBUG00000007754	trmt13	98	51.931	Haplochromis_burtoni
ENSUAMG00000017251	TRMT13	99	84.664	ENSHGLG00000002164	TRMT13	99	84.664	Heterocephalus_glaber_female
ENSUAMG00000017251	TRMT13	99	84.664	ENSHGLG00100001618	TRMT13	99	84.664	Heterocephalus_glaber_male
ENSUAMG00000017251	TRMT13	96	47.702	ENSHCOG00000020553	trmt13	98	47.702	Hippocampus_comes
ENSUAMG00000017251	TRMT13	95	54.762	ENSIPUG00000024787	trmt13	98	55.195	Ictalurus_punctatus
ENSUAMG00000017251	TRMT13	100	86.071	ENSSTOG00000013483	TRMT13	100	86.071	Ictidomys_tridecemlineatus
ENSUAMG00000017251	TRMT13	100	81.705	ENSJJAG00000018012	Trmt13	100	81.705	Jaculus_jaculus
ENSUAMG00000017251	TRMT13	67	48.428	ENSKMAG00000007639	trmt13	92	48.701	Kryptolebias_marmoratus
ENSUAMG00000017251	TRMT13	96	48.218	ENSLBEG00000020238	trmt13	99	48.218	Labrus_bergylta
ENSUAMG00000017251	TRMT13	98	58.787	ENSLACG00000013153	TRMT13	100	58.168	Latimeria_chalumnae
ENSUAMG00000017251	TRMT13	95	55.895	ENSLOCG00000000418	trmt13	97	56.087	Lepisosteus_oculatus
ENSUAMG00000017251	TRMT13	73	88.529	ENSLAFG00000002383	TRMT13	92	88.529	Loxodonta_africana
ENSUAMG00000017251	TRMT13	100	85.031	ENSMFAG00000034681	TRMT13	100	89.908	Macaca_fascicularis
ENSUAMG00000017251	TRMT13	100	85.031	ENSMMUG00000004243	TRMT13	100	89.908	Macaca_mulatta
ENSUAMG00000017251	TRMT13	100	85.031	ENSMNEG00000036102	TRMT13	100	89.908	Macaca_nemestrina
ENSUAMG00000017251	TRMT13	100	85.031	ENSMLEG00000034258	TRMT13	100	90.826	Mandrillus_leucophaeus
ENSUAMG00000017251	TRMT13	96	50.763	ENSMAMG00000016597	trmt13	98	50.763	Mastacembelus_armatus
ENSUAMG00000017251	TRMT13	95	51.502	ENSMZEG00005020959	trmt13	98	51.502	Maylandia_zebra
ENSUAMG00000017251	TRMT13	88	63.934	ENSMGAG00000006970	TRMT13	100	63.934	Meleagris_gallopavo
ENSUAMG00000017251	TRMT13	99	79.210	ENSMAUG00000010448	Trmt13	99	79.210	Mesocricetus_auratus
ENSUAMG00000017251	TRMT13	100	86.486	ENSMICG00000005283	TRMT13	100	90.826	Microcebus_murinus
ENSUAMG00000017251	TRMT13	99	77.755	ENSMOCG00000019914	Trmt13	99	77.755	Microtus_ochrogaster
ENSUAMG00000017251	TRMT13	52	51.587	ENSMMOG00000007762	trmt13	89	51.587	Mola_mola
ENSUAMG00000017251	TRMT13	99	71.074	ENSMODG00000003646	TRMT13	99	71.074	Monodelphis_domestica
ENSUAMG00000017251	TRMT13	96	51.106	ENSMALG00000020965	trmt13	97	51.106	Monopterus_albus
ENSUAMG00000017251	TRMT13	99	79.707	MGP_CAROLIEiJ_G0025568	Trmt13	98	79.707	Mus_caroli
ENSUAMG00000017251	TRMT13	99	79.541	ENSMUSG00000033439	Trmt13	99	79.541	Mus_musculus
ENSUAMG00000017251	TRMT13	99	80.753	MGP_PahariEiJ_G0027014	Trmt13	98	80.753	Mus_pahari
ENSUAMG00000017251	TRMT13	99	80.126	MGP_SPRETEiJ_G0026518	Trmt13	98	80.126	Mus_spretus
ENSUAMG00000017251	TRMT13	78	85.039	ENSMPUG00000002078	-	100	85.039	Mustela_putorius_furo
ENSUAMG00000017251	TRMT13	100	75.468	ENSMLUG00000002124	TRMT13	100	75.468	Myotis_lucifugus
ENSUAMG00000017251	TRMT13	98	47.391	ENSNBRG00000006783	trmt13	95	49.119	Neolamprologus_brichardi
ENSUAMG00000017251	TRMT13	100	84.615	ENSNLEG00000035917	TRMT13	100	88.073	Nomascus_leucogenys
ENSUAMG00000017251	TRMT13	50	62.903	ENSMEUG00000013346	-	100	62.903	Notamacropus_eugenii
ENSUAMG00000017251	TRMT13	66	86.000	ENSOPRG00000012048	TRMT13	67	86.000	Ochotona_princeps
ENSUAMG00000017251	TRMT13	98	49.287	ENSONIG00000004574	trmt13	98	52.043	Oreochromis_niloticus
ENSUAMG00000017251	TRMT13	89	69.838	ENSOANG00000012057	TRMT13	99	69.838	Ornithorhynchus_anatinus
ENSUAMG00000017251	TRMT13	100	84.407	ENSOCUG00000023095	TRMT13	100	84.407	Oryctolagus_cuniculus
ENSUAMG00000017251	TRMT13	96	48.017	ENSORLG00000003320	trmt13	99	49.045	Oryzias_latipes
ENSUAMG00000017251	TRMT13	95	49.666	ENSORLG00020005972	trmt13	97	49.666	Oryzias_latipes_hni
ENSUAMG00000017251	TRMT13	96	51.173	ENSORLG00015002270	trmt13	99	51.386	Oryzias_latipes_hsok
ENSUAMG00000017251	TRMT13	97	49.894	ENSOMEG00000006724	trmt13	94	51.068	Oryzias_melastigma
ENSUAMG00000017251	TRMT13	98	86.047	ENSOGAG00000005618	TRMT13	97	85.655	Otolemur_garnettii
ENSUAMG00000017251	TRMT13	100	85.447	ENSOARG00000017983	TRMT13	100	85.447	Ovis_aries
ENSUAMG00000017251	TRMT13	100	84.615	ENSPPAG00000043736	TRMT13	99	88.889	Pan_paniscus
ENSUAMG00000017251	TRMT13	100	87.942	ENSPPRG00000003424	TRMT13	100	94.495	Panthera_pardus
ENSUAMG00000017251	TRMT13	100	87.942	ENSPTIG00000018598	TRMT13	100	94.495	Panthera_tigris_altaica
ENSUAMG00000017251	TRMT13	100	84.200	ENSPTRG00000001001	TRMT13	99	88.889	Pan_troglodytes
ENSUAMG00000017251	TRMT13	100	85.239	ENSPANG00000007598	TRMT13	100	89.908	Papio_anubis
ENSUAMG00000017251	TRMT13	95	54.664	ENSPKIG00000001514	trmt13	98	54.664	Paramormyrops_kingsleyae
ENSUAMG00000017251	TRMT13	86	66.746	ENSPSIG00000012703	TRMT13	99	66.746	Pelodiscus_sinensis
ENSUAMG00000017251	TRMT13	96	52.723	ENSPMGG00000013298	trmt13	94	52.723	Periophthalmus_magnuspinnatus
ENSUAMG00000017251	TRMT13	99	78.586	ENSPEMG00000000275	Trmt13	99	78.586	Peromyscus_maniculatus_bairdii
ENSUAMG00000017251	TRMT13	95	43.121	ENSPMAG00000000823	trmt13	100	42.570	Petromyzon_marinus
ENSUAMG00000017251	TRMT13	99	71.102	ENSPCIG00000007699	TRMT13	99	71.726	Phascolarctos_cinereus
ENSUAMG00000017251	TRMT13	98	47.346	ENSPFOG00000008675	trmt13	98	47.346	Poecilia_formosa
ENSUAMG00000017251	TRMT13	95	46.581	ENSPLAG00000009709	trmt13	99	46.581	Poecilia_latipinna
ENSUAMG00000017251	TRMT13	95	45.708	ENSPMEG00000022954	trmt13	99	45.708	Poecilia_mexicana
ENSUAMG00000017251	TRMT13	74	49.189	ENSPREG00000005645	trmt13	91	51.527	Poecilia_reticulata
ENSUAMG00000017251	TRMT13	100	84.407	ENSPPYG00000001120	TRMT13	100	84.407	Pongo_abelii
ENSUAMG00000017251	TRMT13	100	83.891	ENSPCAG00000002340	TRMT13	100	83.891	Procavia_capensis
ENSUAMG00000017251	TRMT13	100	85.863	ENSPCOG00000017984	TRMT13	100	91.743	Propithecus_coquereli
ENSUAMG00000017251	TRMT13	100	86.486	ENSPVAG00000017430	TRMT13	100	86.486	Pteropus_vampyrus
ENSUAMG00000017251	TRMT13	95	52.125	ENSPNYG00000013690	trmt13	98	52.125	Pundamilia_nyererei
ENSUAMG00000017251	TRMT13	95	53.448	ENSPNAG00000022130	trmt13	97	53.448	Pygocentrus_nattereri
ENSUAMG00000017251	TRMT13	99	79.707	ENSRNOG00000015140	Trmt13	96	79.707	Rattus_norvegicus
ENSUAMG00000017251	TRMT13	100	85.447	ENSRBIG00000037686	TRMT13	100	89.908	Rhinopithecus_bieti
ENSUAMG00000017251	TRMT13	100	85.447	ENSRROG00000044057	TRMT13	100	89.908	Rhinopithecus_roxellana
ENSUAMG00000017251	TRMT13	100	84.823	ENSSBOG00000026541	TRMT13	100	89.908	Saimiri_boliviensis_boliviensis
ENSUAMG00000017251	TRMT13	91	72.998	ENSSHAG00000005213	TRMT13	97	72.998	Sarcophilus_harrisii
ENSUAMG00000017251	TRMT13	96	52.903	ENSSFOG00015017560	trmt13	98	52.473	Scleropages_formosus
ENSUAMG00000017251	TRMT13	96	49.578	ENSSMAG00000014592	trmt13	97	49.578	Scophthalmus_maximus
ENSUAMG00000017251	TRMT13	95	48.837	ENSSDUG00000015508	trmt13	97	48.548	Seriola_dumerili
ENSUAMG00000017251	TRMT13	95	49.156	ENSSLDG00000019060	trmt13	96	49.156	Seriola_lalandi_dorsalis
ENSUAMG00000017251	TRMT13	99	72.176	ENSSARG00000010344	TRMT13	99	72.176	Sorex_araneus
ENSUAMG00000017251	TRMT13	96	65.659	ENSSPUG00000016339	TRMT13	100	65.659	Sphenodon_punctatus
ENSUAMG00000017251	TRMT13	98	50.936	ENSSPAG00000011922	trmt13	99	51.029	Stegastes_partitus
ENSUAMG00000017251	TRMT13	100	87.734	ENSSSCG00000006869	TRMT13	100	87.734	Sus_scrofa
ENSUAMG00000017251	TRMT13	97	64.530	ENSTGUG00000005253	TRMT13	100	64.530	Taeniopygia_guttata
ENSUAMG00000017251	TRMT13	95	48.298	ENSTRUG00000008400	trmt13	99	48.326	Takifugu_rubripes
ENSUAMG00000017251	TRMT13	86	70.913	ENSTBEG00000008911	TRMT13	100	70.913	Tupaia_belangeri
ENSUAMG00000017251	TRMT13	52	96.000	ENSTTRG00000015302	-	60	96.000	Tursiops_truncatus
ENSUAMG00000017251	TRMT13	100	93.971	ENSUMAG00000007901	TRMT13	100	93.971	Ursus_maritimus
ENSUAMG00000017251	TRMT13	89	75.231	ENSVPAG00000001034	TRMT13	100	75.231	Vicugna_pacos
ENSUAMG00000017251	TRMT13	99	88.358	ENSVVUG00000021996	TRMT13	99	88.358	Vulpes_vulpes
ENSUAMG00000017251	TRMT13	98	54.316	ENSXETG00000013204	trmt13	99	54.316	Xenopus_tropicalis
ENSUAMG00000017251	TRMT13	95	45.940	ENSXMAG00000010765	trmt13	99	45.940	Xiphophorus_maculatus