EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000017265 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 21073 bases
Position: chrLZNR01008521.1:117362-138434
Accession: 17981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000021939	RTC	PF01137.21	9.1e-87	1	1
ENSUAMP00000021939	RTC_insert	PF05189.13	7.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000024529	RTCA-201	1069	-	ENSUAMP00000021939	356 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000017265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000017265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000017265	RTCA	96	92.420	ENSG00000137996	RTCA	100	93.878	Homo_sapiens
ENSUAMG00000017265	RTCA	95	71.302	ENSAPOG00000001345	rtca	92	71.302	Acanthochromis_polyacanthus
ENSUAMG00000017265	RTCA	69	94.715	ENSAMEG00000008855	RTCA	91	94.715	Ailuropoda_melanoleuca
ENSUAMG00000017265	RTCA	95	71.302	ENSACIG00000019643	rtca	93	71.302	Amphilophus_citrinellus
ENSUAMG00000017265	RTCA	98	69.828	ENSAOCG00000014979	rtca	95	69.828	Amphiprion_ocellaris
ENSUAMG00000017265	RTCA	98	69.828	ENSAPEG00000006945	rtca	95	69.828	Amphiprion_percula
ENSUAMG00000017265	RTCA	96	68.805	ENSATEG00000006315	rtca	94	68.805	Anabas_testudineus
ENSUAMG00000017265	RTCA	92	78.116	ENSAPLG00000015430	RTCA	93	78.116	Anas_platyrhynchos
ENSUAMG00000017265	RTCA	96	91.837	ENSANAG00000025446	RTCA	94	91.837	Aotus_nancymaae
ENSUAMG00000017265	RTCA	96	69.679	ENSACLG00000020770	rtca	93	69.679	Astatotilapia_calliptera
ENSUAMG00000017265	RTCA	98	71.264	ENSAMXG00000043271	rtca	95	71.264	Astyanax_mexicanus
ENSUAMG00000017265	RTCA	96	93.586	ENSBTAG00000006321	RTCA	94	93.586	Bos_taurus
ENSUAMG00000017265	RTCA	96	91.837	ENSCJAG00000003398	RTCA	94	91.837	Callithrix_jacchus
ENSUAMG00000017265	RTCA	96	95.627	ENSCAFG00000020010	RTCA	64	95.627	Canis_familiaris
ENSUAMG00000017265	RTCA	96	95.627	ENSCAFG00020011528	RTCA	54	95.627	Canis_lupus_dingo
ENSUAMG00000017265	RTCA	96	93.586	ENSCHIG00000018937	RTCA	94	93.586	Capra_hircus
ENSUAMG00000017265	RTCA	96	91.545	ENSTSYG00000011305	RTCA	94	91.545	Carlito_syrichta
ENSUAMG00000017265	RTCA	94	93.994	ENSCCAG00000021844	RTCA	99	93.994	Cebus_capucinus
ENSUAMG00000017265	RTCA	96	89.045	ENSCATG00000019364	RTCA	93	91.958	Cercocebus_atys
ENSUAMG00000017265	RTCA	83	92.177	ENSCLAG00000006125	RTCA	93	92.177	Chinchilla_lanigera
ENSUAMG00000017265	RTCA	96	92.420	ENSCSAG00000001509	RTCA	94	92.420	Chlorocebus_sabaeus
ENSUAMG00000017265	RTCA	96	92.128	ENSCHOG00000005211	RTCA	94	92.128	Choloepus_hoffmanni
ENSUAMG00000017265	RTCA	94	85.373	ENSCPBG00000026658	RTCA	98	85.373	Chrysemys_picta_bellii
ENSUAMG00000017265	RTCA	94	56.119	ENSCING00000007875	-	92	56.119	Ciona_intestinalis
ENSUAMG00000017265	RTCA	94	54.627	ENSCSAVG00000007269	-	92	54.627	Ciona_savignyi
ENSUAMG00000017265	RTCA	96	92.128	ENSCANG00000040106	RTCA	94	92.128	Colobus_angolensis_palliatus
ENSUAMG00000017265	RTCA	69	90.164	ENSCGRG00001013163	Rtca	77	90.164	Cricetulus_griseus_chok1gshd
ENSUAMG00000017265	RTCA	95	69.436	ENSCSEG00000000530	rtca	91	69.436	Cynoglossus_semilaevis
ENSUAMG00000017265	RTCA	96	57.726	ENSCVAG00000021809	rtca	94	57.726	Cyprinodon_variegatus
ENSUAMG00000017265	RTCA	99	70.940	ENSDARG00000002215	rtca	96	70.940	Danio_rerio
ENSUAMG00000017265	RTCA	96	92.420	ENSDNOG00000000456	RTCA	94	92.420	Dasypus_novemcinctus
ENSUAMG00000017265	RTCA	96	91.545	ENSDORG00000005448	Rtca	94	91.545	Dipodomys_ordii
ENSUAMG00000017265	RTCA	94	39.940	FBgn0025630	Rtca	92	39.940	Drosophila_melanogaster
ENSUAMG00000017265	RTCA	94	55.655	ENSEBUG00000008556	rtca	92	55.655	Eptatretus_burgeri
ENSUAMG00000017265	RTCA	96	93.878	ENSEASG00005015926	RTCA	94	93.878	Equus_asinus_asinus
ENSUAMG00000017265	RTCA	96	93.878	ENSECAG00000019831	RTCA	94	93.878	Equus_caballus
ENSUAMG00000017265	RTCA	94	84.104	ENSEEUG00000001165	RTCA	100	84.104	Erinaceus_europaeus
ENSUAMG00000017265	RTCA	95	71.006	ENSELUG00000003741	rtca	93	71.006	Esox_lucius
ENSUAMG00000017265	RTCA	96	95.627	ENSFCAG00000024460	RTCA	94	95.627	Felis_catus
ENSUAMG00000017265	RTCA	94	82.985	ENSFALG00000002443	RTCA	90	82.985	Ficedula_albicollis
ENSUAMG00000017265	RTCA	96	92.128	ENSFDAG00000012070	-	94	92.128	Fukomys_damarensis
ENSUAMG00000017265	RTCA	96	70.435	ENSFDAG00000016084	-	95	70.435	Fukomys_damarensis
ENSUAMG00000017265	RTCA	70	63.710	ENSFHEG00000002868	rtca	86	74.000	Fundulus_heteroclitus
ENSUAMG00000017265	RTCA	96	68.805	ENSGMOG00000013264	rtca	94	68.805	Gadus_morhua
ENSUAMG00000017265	RTCA	96	81.232	ENSGALG00000005277	RTCA	93	81.232	Gallus_gallus
ENSUAMG00000017265	RTCA	97	69.741	ENSGAFG00000011853	rtca	95	69.741	Gambusia_affinis
ENSUAMG00000017265	RTCA	96	69.388	ENSGACG00000013497	rtca	94	69.388	Gasterosteus_aculeatus
ENSUAMG00000017265	RTCA	82	84.300	ENSGAGG00000023306	RTCA	100	84.300	Gopherus_agassizii
ENSUAMG00000017265	RTCA	96	91.545	ENSGGOG00000044018	-	94	91.545	Gorilla_gorilla
ENSUAMG00000017265	RTCA	96	92.962	ENSGGOG00000009546	-	93	92.962	Gorilla_gorilla
ENSUAMG00000017265	RTCA	96	69.388	ENSHBUG00000002114	rtca	93	69.388	Haplochromis_burtoni
ENSUAMG00000017265	RTCA	96	91.254	ENSHGLG00000002617	RTCA	94	91.254	Heterocephalus_glaber_female
ENSUAMG00000017265	RTCA	96	91.254	ENSHGLG00100006056	RTCA	94	91.254	Heterocephalus_glaber_male
ENSUAMG00000017265	RTCA	96	64.431	ENSHCOG00000020628	rtca	84	64.431	Hippocampus_comes
ENSUAMG00000017265	RTCA	98	72.414	ENSIPUG00000024803	rtca	95	72.414	Ictalurus_punctatus
ENSUAMG00000017265	RTCA	96	81.686	ENSSTOG00000033099	-	94	81.686	Ictidomys_tridecemlineatus
ENSUAMG00000017265	RTCA	96	85.714	ENSSTOG00000013528	-	93	85.714	Ictidomys_tridecemlineatus
ENSUAMG00000017265	RTCA	96	64.140	ENSJJAG00000016178	Rtca	92	64.140	Jaculus_jaculus
ENSUAMG00000017265	RTCA	94	72.239	ENSKMAG00000006651	rtca	91	72.239	Kryptolebias_marmoratus
ENSUAMG00000017265	RTCA	95	69.231	ENSLBEG00000028971	rtca	93	69.231	Labrus_bergylta
ENSUAMG00000017265	RTCA	84	68.792	ENSLBEG00000002448	-	93	68.792	Labrus_bergylta
ENSUAMG00000017265	RTCA	96	76.968	ENSLACG00000013666	RTCA	94	76.968	Latimeria_chalumnae
ENSUAMG00000017265	RTCA	96	73.178	ENSLOCG00000000093	rtca	93	73.178	Lepisosteus_oculatus
ENSUAMG00000017265	RTCA	96	93.003	ENSLAFG00000001473	RTCA	94	93.003	Loxodonta_africana
ENSUAMG00000017265	RTCA	96	92.420	ENSMFAG00000034132	RTCA	94	92.420	Macaca_fascicularis
ENSUAMG00000017265	RTCA	96	91.837	ENSMMUG00000019105	RTCA	94	91.837	Macaca_mulatta
ENSUAMG00000017265	RTCA	80	91.958	ENSMNEG00000037163	RTCA	93	91.958	Macaca_nemestrina
ENSUAMG00000017265	RTCA	84	85.235	ENSMLEG00000042151	RTCA	89	85.235	Mandrillus_leucophaeus
ENSUAMG00000017265	RTCA	98	71.060	ENSMAMG00000016536	rtca	96	71.060	Mastacembelus_armatus
ENSUAMG00000017265	RTCA	96	69.679	ENSMZEG00005017945	rtca	93	69.679	Maylandia_zebra
ENSUAMG00000017265	RTCA	83	79.932	ENSMGAG00000006892	RTCA	92	79.932	Meleagris_gallopavo
ENSUAMG00000017265	RTCA	96	90.323	ENSMAUG00000008488	Rtca	93	90.323	Mesocricetus_auratus
ENSUAMG00000017265	RTCA	80	93.007	ENSMICG00000008643	RTCA	93	93.007	Microcebus_murinus
ENSUAMG00000017265	RTCA	96	90.909	ENSMOCG00000016660	Rtca	93	90.909	Microtus_ochrogaster
ENSUAMG00000017265	RTCA	80	72.378	ENSMMOG00000007750	rtca	93	72.378	Mola_mola
ENSUAMG00000017265	RTCA	96	89.796	ENSMODG00000003557	RTCA	94	89.796	Monodelphis_domestica
ENSUAMG00000017265	RTCA	96	71.720	ENSMALG00000020844	rtca	94	71.720	Monopterus_albus
ENSUAMG00000017265	RTCA	96	89.736	MGP_CAROLIEiJ_G0025565	Rtca	100	89.437	Mus_caroli
ENSUAMG00000017265	RTCA	96	89.443	ENSMUSG00000000339	Rtca	100	89.437	Mus_musculus
ENSUAMG00000017265	RTCA	96	89.443	MGP_PahariEiJ_G0027011	Rtca	100	88.732	Mus_pahari
ENSUAMG00000017265	RTCA	96	89.443	MGP_SPRETEiJ_G0026515	Rtca	100	88.732	Mus_spretus
ENSUAMG00000017265	RTCA	96	95.918	ENSMPUG00000012119	RTCA	94	95.918	Mustela_putorius_furo
ENSUAMG00000017265	RTCA	96	86.550	ENSMLUG00000009922	RTCA	93	86.550	Myotis_lucifugus
ENSUAMG00000017265	RTCA	96	90.671	ENSNGAG00000011540	Rtca	93	90.671	Nannospalax_galili
ENSUAMG00000017265	RTCA	96	69.679	ENSNBRG00000003062	rtca	93	69.679	Neolamprologus_brichardi
ENSUAMG00000017265	RTCA	96	92.711	ENSNLEG00000031426	RTCA	94	92.711	Nomascus_leucogenys
ENSUAMG00000017265	RTCA	50	95.122	ENSMEUG00000010030	-	68	67.568	Notamacropus_eugenii
ENSUAMG00000017265	RTCA	69	85.366	ENSOPRG00000012092	RTCA	65	85.366	Ochotona_princeps
ENSUAMG00000017265	RTCA	91	92.000	ENSODEG00000006990	RTCA	90	92.073	Octodon_degus
ENSUAMG00000017265	RTCA	96	69.388	ENSONIG00000007753	rtca	93	69.388	Oreochromis_niloticus
ENSUAMG00000017265	RTCA	83	85.374	ENSOANG00000012055	RTCA	91	85.374	Ornithorhynchus_anatinus
ENSUAMG00000017265	RTCA	96	93.586	ENSOCUG00000014247	RTCA	94	93.586	Oryctolagus_cuniculus
ENSUAMG00000017265	RTCA	96	69.971	ENSORLG00000013605	rtca	97	71.856	Oryzias_latipes
ENSUAMG00000017265	RTCA	96	69.971	ENSORLG00020001904	rtca	94	71.856	Oryzias_latipes_hni
ENSUAMG00000017265	RTCA	100	67.769	ENSORLG00015021064	rtca	98	67.769	Oryzias_latipes_hsok
ENSUAMG00000017265	RTCA	96	70.554	ENSOMEG00000000756	rtca	94	70.554	Oryzias_melastigma
ENSUAMG00000017265	RTCA	96	82.507	ENSOGAG00000005627	RTCA	94	82.507	Otolemur_garnettii
ENSUAMG00000017265	RTCA	83	92.881	ENSOARG00000018122	RTCA	93	92.881	Ovis_aries
ENSUAMG00000017265	RTCA	96	89.326	ENSPPAG00000035119	RTCA	93	91.958	Pan_paniscus
ENSUAMG00000017265	RTCA	96	95.335	ENSPPRG00000000350	RTCA	94	95.335	Panthera_pardus
ENSUAMG00000017265	RTCA	96	95.335	ENSPTIG00000012816	RTCA	94	95.335	Panthera_tigris_altaica
ENSUAMG00000017265	RTCA	96	89.607	ENSPTRG00000001004	RTCA	93	92.308	Pan_troglodytes
ENSUAMG00000017265	RTCA	96	92.128	ENSPANG00000000346	RTCA	94	92.128	Papio_anubis
ENSUAMG00000017265	RTCA	96	73.761	ENSPKIG00000001653	rtca	94	73.761	Paramormyrops_kingsleyae
ENSUAMG00000017265	RTCA	96	82.799	ENSPSIG00000011408	RTCA	94	82.799	Pelodiscus_sinensis
ENSUAMG00000017265	RTCA	96	90.616	ENSPEMG00000018582	Rtca	93	90.616	Peromyscus_maniculatus_bairdii
ENSUAMG00000017265	RTCA	94	59.467	ENSPMAG00000009110	rtca	92	59.467	Petromyzon_marinus
ENSUAMG00000017265	RTCA	96	90.087	ENSPCIG00000007684	RTCA	94	90.087	Phascolarctos_cinereus
ENSUAMG00000017265	RTCA	97	70.115	ENSPFOG00000004824	rtca	95	70.115	Poecilia_formosa
ENSUAMG00000017265	RTCA	97	70.317	ENSPLAG00000011753	rtca	95	70.317	Poecilia_latipinna
ENSUAMG00000017265	RTCA	97	70.317	ENSPMEG00000020469	rtca	95	70.317	Poecilia_mexicana
ENSUAMG00000017265	RTCA	97	70.893	ENSPREG00000001365	rtca	95	70.893	Poecilia_reticulata
ENSUAMG00000017265	RTCA	96	92.420	ENSPPYG00000001115	RTCA	94	92.420	Pongo_abelii
ENSUAMG00000017265	RTCA	96	88.921	ENSPCAG00000005076	RTCA	94	88.921	Procavia_capensis
ENSUAMG00000017265	RTCA	96	94.169	ENSPCOG00000005603	RTCA	92	97.917	Propithecus_coquereli
ENSUAMG00000017265	RTCA	96	89.831	ENSPVAG00000009478	RTCA	93	89.831	Pteropus_vampyrus
ENSUAMG00000017265	RTCA	96	69.679	ENSPNYG00000004722	rtca	93	69.679	Pundamilia_nyererei
ENSUAMG00000017265	RTCA	98	71.264	ENSPNAG00000022270	rtca	95	71.264	Pygocentrus_nattereri
ENSUAMG00000017265	RTCA	96	90.029	ENSRNOG00000014575	Rtca	93	90.029	Rattus_norvegicus
ENSUAMG00000017265	RTCA	96	88.483	ENSRBIG00000041180	RTCA	93	91.259	Rhinopithecus_bieti
ENSUAMG00000017265	RTCA	96	91.837	ENSRROG00000024929	RTCA	94	91.837	Rhinopithecus_roxellana
ENSUAMG00000017265	RTCA	96	91.254	ENSSBOG00000028626	RTCA	94	91.254	Saimiri_boliviensis_boliviensis
ENSUAMG00000017265	RTCA	96	90.087	ENSSHAG00000001758	RTCA	94	90.087	Sarcophilus_harrisii
ENSUAMG00000017265	RTCA	95	68.843	ENSSMAG00000014680	rtca	91	68.843	Scophthalmus_maximus
ENSUAMG00000017265	RTCA	96	70.468	ENSSDUG00000015585	rtca	92	70.468	Seriola_dumerili
ENSUAMG00000017265	RTCA	92	71.646	ENSSLDG00000018985	rtca	89	71.646	Seriola_lalandi_dorsalis
ENSUAMG00000017265	RTCA	83	83.333	ENSSARG00000013993	RTCA	93	83.333	Sorex_araneus
ENSUAMG00000017265	RTCA	96	69.388	ENSSPAG00000011938	rtca	93	69.388	Stegastes_partitus
ENSUAMG00000017265	RTCA	96	93.878	ENSSSCG00000006865	RTCA	94	93.878	Sus_scrofa
ENSUAMG00000017265	RTCA	96	81.525	ENSTGUG00000005154	RTCA	93	81.525	Taeniopygia_guttata
ENSUAMG00000017265	RTCA	98	69.341	ENSTRUG00000008799	rtca	96	69.341	Takifugu_rubripes
ENSUAMG00000017265	RTCA	96	71.429	ENSTNIG00000004725	rtca	94	71.429	Tetraodon_nigroviridis
ENSUAMG00000017265	RTCA	96	89.045	ENSTTRG00000015327	RTCA	94	89.045	Tursiops_truncatus
ENSUAMG00000017265	RTCA	96	97.085	ENSUMAG00000007881	RTCA	94	97.085	Ursus_maritimus
ENSUAMG00000017265	RTCA	83	82.653	ENSVPAG00000001039	RTCA	77	82.653	Vicugna_pacos
ENSUAMG00000017265	RTCA	96	95.335	ENSVVUG00000022041	RTCA	63	95.335	Vulpes_vulpes
ENSUAMG00000017265	RTCA	95	64.912	ENSXETG00000031661	RTCA	93	64.912	Xenopus_tropicalis
ENSUAMG00000017265	RTCA	97	60.231	ENSXCOG00000008002	rtca	95	60.231	Xiphophorus_couchianus
ENSUAMG00000017265	RTCA	97	70.029	ENSXMAG00000005482	rtca	95	70.029	Xiphophorus_maculatus