EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000017309 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 26498 bases
Position: chrLZNR01008531.1:87696-114193
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000021987	POP1	PF06978.11	1.4e-36	1	2
ENSUAMP00000021987	POP1	PF06978.11	1.4e-36	2	2
ENSUAMP00000021987	POPLD	PF08170.12	1.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000024582	POP1-201	2937	-	ENSUAMP00000021987	978 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000017309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000017309's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000017309	POP1	100	78.776	ENSG00000104356	POP1	99	78.677	Homo_sapiens
ENSUAMG00000017309	POP1	100	48.239	ENSAPOG00000008198	pop1	99	48.239	Acanthochromis_polyacanthus
ENSUAMG00000017309	POP1	100	91.502	ENSAMEG00000000556	POP1	99	91.502	Ailuropoda_melanoleuca
ENSUAMG00000017309	POP1	94	49.520	ENSACIG00000004169	POP1	93	49.520	Amphilophus_citrinellus
ENSUAMG00000017309	POP1	100	47.647	ENSAOCG00000010991	pop1	99	47.941	Amphiprion_ocellaris
ENSUAMG00000017309	POP1	96	46.701	ENSAPEG00000007607	pop1	98	47.526	Amphiprion_percula
ENSUAMG00000017309	POP1	100	47.007	ENSATEG00000024814	POP1	99	46.608	Anabas_testudineus
ENSUAMG00000017309	POP1	96	61.635	ENSAPLG00000014418	POP1	100	61.595	Anas_platyrhynchos
ENSUAMG00000017309	POP1	99	55.686	ENSACAG00000016083	POP1	99	55.675	Anolis_carolinensis
ENSUAMG00000017309	POP1	88	79.630	ENSANAG00000026360	POP1	99	79.630	Aotus_nancymaae
ENSUAMG00000017309	POP1	100	47.549	ENSACLG00000010951	pop1	99	47.801	Astatotilapia_calliptera
ENSUAMG00000017309	POP1	100	46.756	ENSAMXG00000014483	POP1	99	46.374	Astyanax_mexicanus
ENSUAMG00000017309	POP1	100	78.308	ENSBTAG00000012596	POP1	99	78.308	Bos_taurus
ENSUAMG00000017309	POP1	100	77.569	ENSCJAG00000015567	POP1	99	77.569	Callithrix_jacchus
ENSUAMG00000017309	POP1	100	82.306	ENSCAFG00000000469	POP1	99	82.306	Canis_familiaris
ENSUAMG00000017309	POP1	100	83.996	ENSCAFG00020026765	POP1	99	83.996	Canis_lupus_dingo
ENSUAMG00000017309	POP1	100	79.005	ENSCHIG00000017066	POP1	99	79.005	Capra_hircus
ENSUAMG00000017309	POP1	100	77.098	ENSTSYG00000003097	POP1	99	77.098	Carlito_syrichta
ENSUAMG00000017309	POP1	99	72.986	ENSCAPG00000007251	POP1	99	72.888	Cavia_aperea
ENSUAMG00000017309	POP1	99	75.345	ENSCPOG00000002901	POP1	99	75.345	Cavia_porcellus
ENSUAMG00000017309	POP1	100	79.058	ENSCCAG00000018939	POP1	99	79.058	Cebus_capucinus
ENSUAMG00000017309	POP1	100	78.282	ENSCATG00000040916	POP1	99	78.282	Cercocebus_atys
ENSUAMG00000017309	POP1	100	77.196	ENSCLAG00000007208	POP1	96	77.196	Chinchilla_lanigera
ENSUAMG00000017309	POP1	94	81.257	ENSCSAG00000012340	POP1	99	81.257	Chlorocebus_sabaeus
ENSUAMG00000017309	POP1	95	76.414	ENSCHOG00000011432	POP1	96	76.414	Choloepus_hoffmanni
ENSUAMG00000017309	POP1	100	63.699	ENSCPBG00000006373	POP1	99	63.699	Chrysemys_picta_bellii
ENSUAMG00000017309	POP1	85	37.698	ENSCING00000008323	-	88	37.698	Ciona_intestinalis
ENSUAMG00000017309	POP1	100	78.381	ENSCANG00000001647	POP1	99	78.381	Colobus_angolensis_palliatus
ENSUAMG00000017309	POP1	100	71.992	ENSCGRG00001017308	Pop1	99	71.992	Cricetulus_griseus_chok1gshd
ENSUAMG00000017309	POP1	100	69.807	ENSCGRG00000010824	Pop1	99	69.807	Cricetulus_griseus_crigri
ENSUAMG00000017309	POP1	100	46.516	ENSCSEG00000008737	POP1	99	46.863	Cynoglossus_semilaevis
ENSUAMG00000017309	POP1	100	48.416	ENSCVAG00000022248	pop1	99	48.614	Cyprinodon_variegatus
ENSUAMG00000017309	POP1	50	47.347	ENSDARG00000102087	pop1	96	47.551	Danio_rerio
ENSUAMG00000017309	POP1	100	73.250	ENSDNOG00000019974	POP1	99	73.250	Dasypus_novemcinctus
ENSUAMG00000017309	POP1	100	64.363	ENSDORG00000015384	Pop1	99	64.363	Dipodomys_ordii
ENSUAMG00000017309	POP1	63	34.906	FBgn0026702	l(1)G0045	71	34.462	Drosophila_melanogaster
ENSUAMG00000017309	POP1	88	64.438	ENSETEG00000007839	POP1	87	64.438	Echinops_telfairi
ENSUAMG00000017309	POP1	50	37.045	ENSEBUG00000014694	-	99	36.842	Eptatretus_burgeri
ENSUAMG00000017309	POP1	50	45.528	ENSEBUG00000009897	pop1	94	45.528	Eptatretus_burgeri
ENSUAMG00000017309	POP1	100	80.933	ENSEASG00005003189	POP1	97	80.933	Equus_asinus_asinus
ENSUAMG00000017309	POP1	100	80.636	ENSECAG00000024236	POP1	99	80.636	Equus_caballus
ENSUAMG00000017309	POP1	66	83.333	ENSEEUG00000003050	-	66	83.333	Erinaceus_europaeus
ENSUAMG00000017309	POP1	99	47.535	ENSELUG00000003526	pop1	99	48.310	Esox_lucius
ENSUAMG00000017309	POP1	100	83.101	ENSFCAG00000002168	POP1	99	83.101	Felis_catus
ENSUAMG00000017309	POP1	95	62.179	ENSFALG00000005711	POP1	99	59.314	Ficedula_albicollis
ENSUAMG00000017309	POP1	100	75.814	ENSFDAG00000017068	POP1	99	75.814	Fukomys_damarensis
ENSUAMG00000017309	POP1	100	47.269	ENSFHEG00000019518	pop1	99	47.766	Fundulus_heteroclitus
ENSUAMG00000017309	POP1	94	46.806	ENSGMOG00000000659	POP1	95	46.702	Gadus_morhua
ENSUAMG00000017309	POP1	100	48.204	ENSGAFG00000019770	POP1	99	48.204	Gambusia_affinis
ENSUAMG00000017309	POP1	94	48.109	ENSGACG00000003499	pop1	91	48.051	Gasterosteus_aculeatus
ENSUAMG00000017309	POP1	100	62.660	ENSGAGG00000011737	POP1	97	62.562	Gopherus_agassizii
ENSUAMG00000017309	POP1	100	78.677	ENSGGOG00000003176	POP1	99	78.578	Gorilla_gorilla
ENSUAMG00000017309	POP1	100	47.507	ENSHBUG00000021583	pop1	99	47.605	Haplochromis_burtoni
ENSUAMG00000017309	POP1	100	75.321	ENSHGLG00000006029	POP1	99	75.321	Heterocephalus_glaber_female
ENSUAMG00000017309	POP1	100	75.321	ENSHGLG00100016879	POP1	99	75.321	Heterocephalus_glaber_male
ENSUAMG00000017309	POP1	94	48.934	ENSHCOG00000013888	pop1	96	48.934	Hippocampus_comes
ENSUAMG00000017309	POP1	100	46.768	ENSIPUG00000018336	pop1	92	53.398	Ictalurus_punctatus
ENSUAMG00000017309	POP1	100	75.542	ENSSTOG00000011455	POP1	96	75.542	Ictidomys_tridecemlineatus
ENSUAMG00000017309	POP1	100	70.542	ENSJJAG00000013325	Pop1	99	70.542	Jaculus_jaculus
ENSUAMG00000017309	POP1	95	49.311	ENSKMAG00000001346	POP1	99	47.956	Kryptolebias_marmoratus
ENSUAMG00000017309	POP1	93	47.774	ENSLBEG00000024457	POP1	95	47.385	Labrus_bergylta
ENSUAMG00000017309	POP1	98	54.681	ENSLACG00000012498	POP1	100	54.681	Latimeria_chalumnae
ENSUAMG00000017309	POP1	99	51.381	ENSLOCG00000009817	POP1	99	51.383	Lepisosteus_oculatus
ENSUAMG00000017309	POP1	100	77.756	ENSLAFG00000010770	POP1	99	77.756	Loxodonta_africana
ENSUAMG00000017309	POP1	100	78.480	ENSMFAG00000000347	POP1	99	78.480	Macaca_fascicularis
ENSUAMG00000017309	POP1	100	78.282	ENSMNEG00000036870	POP1	99	78.282	Macaca_nemestrina
ENSUAMG00000017309	POP1	100	78.381	ENSMLEG00000034986	POP1	99	78.381	Mandrillus_leucophaeus
ENSUAMG00000017309	POP1	100	47.493	ENSMAMG00000004040	pop1	99	47.642	Mastacembelus_armatus
ENSUAMG00000017309	POP1	100	47.605	ENSMZEG00005025448	pop1	99	47.703	Maylandia_zebra
ENSUAMG00000017309	POP1	95	60.562	ENSMGAG00000012167	POP1	99	58.357	Meleagris_gallopavo
ENSUAMG00000017309	POP1	100	72.217	ENSMAUG00000017537	Pop1	99	72.217	Mesocricetus_auratus
ENSUAMG00000017309	POP1	100	77.866	ENSMICG00000004361	POP1	99	77.866	Microcebus_murinus
ENSUAMG00000017309	POP1	100	70.553	ENSMOCG00000006356	Pop1	99	70.949	Microtus_ochrogaster
ENSUAMG00000017309	POP1	100	44.883	ENSMMOG00000018242	pop1	99	44.883	Mola_mola
ENSUAMG00000017309	POP1	99	66.145	ENSMODG00000006561	POP1	99	66.145	Monodelphis_domestica
ENSUAMG00000017309	POP1	100	48.670	ENSMALG00000012621	POP1	99	48.867	Monopterus_albus
ENSUAMG00000017309	POP1	100	70.089	MGP_CAROLIEiJ_G0019726	Pop1	99	70.089	Mus_caroli
ENSUAMG00000017309	POP1	100	69.990	ENSMUSG00000022325	Pop1	99	69.990	Mus_musculus
ENSUAMG00000017309	POP1	100	69.891	MGP_PahariEiJ_G0019735	Pop1	99	69.891	Mus_pahari
ENSUAMG00000017309	POP1	100	69.793	MGP_SPRETEiJ_G0020622	Pop1	99	69.793	Mus_spretus
ENSUAMG00000017309	POP1	100	86.620	ENSMPUG00000015250	POP1	99	86.620	Mustela_putorius_furo
ENSUAMG00000017309	POP1	100	75.794	ENSMLUG00000010204	POP1	99	75.869	Myotis_lucifugus
ENSUAMG00000017309	POP1	100	73.741	ENSNGAG00000001582	Pop1	99	73.741	Nannospalax_galili
ENSUAMG00000017309	POP1	93	48.652	ENSNBRG00000002356	pop1	94	48.827	Neolamprologus_brichardi
ENSUAMG00000017309	POP1	100	77.690	ENSNLEG00000002541	POP1	99	77.690	Nomascus_leucogenys
ENSUAMG00000017309	POP1	89	73.765	ENSMEUG00000003118	POP1	89	73.765	Notamacropus_eugenii
ENSUAMG00000017309	POP1	100	71.358	ENSOPRG00000007667	POP1	99	71.358	Ochotona_princeps
ENSUAMG00000017309	POP1	100	75.740	ENSODEG00000003984	POP1	99	75.641	Octodon_degus
ENSUAMG00000017309	POP1	95	50.532	ENSONIG00000016445	pop1	99	47.941	Oreochromis_niloticus
ENSUAMG00000017309	POP1	58	63.147	ENSOANG00000001278	-	92	63.147	Ornithorhynchus_anatinus
ENSUAMG00000017309	POP1	100	75.147	ENSOCUG00000017400	POP1	99	75.147	Oryctolagus_cuniculus
ENSUAMG00000017309	POP1	96	49.581	ENSORLG00000002839	pop1	99	49.096	Oryzias_latipes
ENSUAMG00000017309	POP1	94	48.984	ENSORLG00020022450	POP1	96	49.305	Oryzias_latipes_hni
ENSUAMG00000017309	POP1	96	49.791	ENSORLG00015012746	POP1	99	49.049	Oryzias_latipes_hsok
ENSUAMG00000017309	POP1	100	48.589	ENSOMEG00000006915	pop1	99	48.795	Oryzias_melastigma
ENSUAMG00000017309	POP1	100	75.444	ENSOGAG00000001466	POP1	99	75.444	Otolemur_garnettii
ENSUAMG00000017309	POP1	100	78.776	ENSPPAG00000018410	POP1	99	78.677	Pan_paniscus
ENSUAMG00000017309	POP1	100	83.101	ENSPPRG00000005002	POP1	99	83.101	Panthera_pardus
ENSUAMG00000017309	POP1	100	83.300	ENSPTIG00000016527	POP1	99	83.201	Panthera_tigris_altaica
ENSUAMG00000017309	POP1	100	78.578	ENSPTRG00000020458	POP1	99	78.578	Pan_troglodytes
ENSUAMG00000017309	POP1	100	78.282	ENSPANG00000009704	POP1	99	78.282	Papio_anubis
ENSUAMG00000017309	POP1	100	50.000	ENSPKIG00000016325	POP1	99	50.000	Paramormyrops_kingsleyae
ENSUAMG00000017309	POP1	100	61.713	ENSPSIG00000012343	POP1	99	61.727	Pelodiscus_sinensis
ENSUAMG00000017309	POP1	97	47.817	ENSPMGG00000022253	POP1	99	47.848	Periophthalmus_magnuspinnatus
ENSUAMG00000017309	POP1	100	70.252	ENSPEMG00000023633	Pop1	99	70.252	Peromyscus_maniculatus_bairdii
ENSUAMG00000017309	POP1	94	43.368	ENSPMAG00000003209	POP1	100	43.368	Petromyzon_marinus
ENSUAMG00000017309	POP1	99	64.746	ENSPCIG00000012216	POP1	99	64.643	Phascolarctos_cinereus
ENSUAMG00000017309	POP1	100	48.361	ENSPFOG00000012490	POP1	99	48.361	Poecilia_formosa
ENSUAMG00000017309	POP1	100	48.211	ENSPLAG00000004646	POP1	99	48.307	Poecilia_latipinna
ENSUAMG00000017309	POP1	100	48.410	ENSPMEG00000019592	POP1	99	48.410	Poecilia_mexicana
ENSUAMG00000017309	POP1	100	48.467	ENSPREG00000020951	POP1	99	48.461	Poecilia_reticulata
ENSUAMG00000017309	POP1	100	78.282	ENSPPYG00000018777	POP1	99	78.184	Pongo_abelii
ENSUAMG00000017309	POP1	100	73.176	ENSPCAG00000016662	POP1	99	72.387	Procavia_capensis
ENSUAMG00000017309	POP1	100	78.063	ENSPCOG00000019420	POP1	99	78.063	Propithecus_coquereli
ENSUAMG00000017309	POP1	100	78.550	ENSPVAG00000014468	POP1	99	78.550	Pteropus_vampyrus
ENSUAMG00000017309	POP1	93	48.482	ENSPNYG00000004476	pop1	98	47.708	Pundamilia_nyererei
ENSUAMG00000017309	POP1	100	46.604	ENSPNAG00000000265	pop1	99	44.329	Pygocentrus_nattereri
ENSUAMG00000017309	POP1	100	69.960	ENSRNOG00000005243	Pop1	99	69.960	Rattus_norvegicus
ENSUAMG00000017309	POP1	100	78.184	ENSRBIG00000007996	POP1	99	78.085	Rhinopithecus_bieti
ENSUAMG00000017309	POP1	100	78.184	ENSRROG00000012334	POP1	99	78.184	Rhinopithecus_roxellana
ENSUAMG00000017309	POP1	100	78.085	ENSSBOG00000020830	POP1	100	78.085	Saimiri_boliviensis_boliviensis
ENSUAMG00000017309	POP1	99	65.524	ENSSHAG00000000296	POP1	99	65.524	Sarcophilus_harrisii
ENSUAMG00000017309	POP1	100	48.909	ENSSFOG00015007429	pop1	97	48.909	Scleropages_formosus
ENSUAMG00000017309	POP1	96	48.037	ENSSMAG00000010467	POP1	98	48.601	Scophthalmus_maximus
ENSUAMG00000017309	POP1	100	47.512	ENSSDUG00000007817	POP1	99	47.122	Seriola_dumerili
ENSUAMG00000017309	POP1	100	47.610	ENSSLDG00000012565	POP1	99	47.317	Seriola_lalandi_dorsalis
ENSUAMG00000017309	POP1	100	57.681	ENSSPUG00000003550	-	99	57.466	Sphenodon_punctatus
ENSUAMG00000017309	POP1	94	50.054	ENSSPAG00000014955	pop1	94	50.379	Stegastes_partitus
ENSUAMG00000017309	POP1	100	78.010	ENSSSCG00000006078	POP1	99	78.010	Sus_scrofa
ENSUAMG00000017309	POP1	95	56.476	ENSTGUG00000012011	-	99	56.329	Taeniopygia_guttata
ENSUAMG00000017309	POP1	95	47.379	ENSTRUG00000010856	pop1	95	47.170	Takifugu_rubripes
ENSUAMG00000017309	POP1	95	48.677	ENSTNIG00000013297	pop1	97	48.677	Tetraodon_nigroviridis
ENSUAMG00000017309	POP1	95	76.145	ENSTBEG00000014214	POP1	96	76.145	Tupaia_belangeri
ENSUAMG00000017309	POP1	100	77.413	ENSTTRG00000016071	POP1	99	77.413	Tursiops_truncatus
ENSUAMG00000017309	POP1	100	94.083	ENSUMAG00000016952	POP1	99	97.114	Ursus_maritimus
ENSUAMG00000017309	POP1	82	83.954	ENSVPAG00000008278	POP1	81	83.954	Vicugna_pacos
ENSUAMG00000017309	POP1	100	83.897	ENSVVUG00000010994	POP1	99	83.897	Vulpes_vulpes
ENSUAMG00000017309	POP1	100	44.051	ENSXCOG00000017043	POP1	99	44.051	Xiphophorus_couchianus
ENSUAMG00000017309	POP1	100	47.921	ENSXMAG00000002472	POP1	99	47.921	Xiphophorus_maculatus