EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000017473 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 36625 bases
Position: chrLZNR01006902.1:43007-79631
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000022219	EST1	PF10374.9	7.4e-25	1	1
ENSUAMP00000022219	EST1_DNA_bind	PF10373.9	1.8e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000024839	SMG7-201	3647	-	ENSUAMP00000022219	1048 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000017473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000017473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000017473	SMG7	100	97.426	ENSG00000116698	SMG7	100	97.487	Homo_sapiens
ENSUAMG00000017473	SMG7	89	70.394	ENSAPOG00000009611	smg7	92	71.019	Acanthochromis_polyacanthus
ENSUAMG00000017473	SMG7	100	95.338	ENSAMEG00000002357	SMG7	96	95.338	Ailuropoda_melanoleuca
ENSUAMG00000017473	SMG7	100	63.309	ENSACIG00000015152	smg7	99	63.579	Amphilophus_citrinellus
ENSUAMG00000017473	SMG7	100	63.443	ENSAOCG00000013538	smg7	96	64.128	Amphiprion_ocellaris
ENSUAMG00000017473	SMG7	100	63.298	ENSAPEG00000007851	smg7	96	63.982	Amphiprion_percula
ENSUAMG00000017473	SMG7	100	62.986	ENSATEG00000006931	smg7	96	63.218	Anabas_testudineus
ENSUAMG00000017473	SMG7	100	85.559	ENSAPLG00000015811	SMG7	96	85.468	Anas_platyrhynchos
ENSUAMG00000017473	SMG7	100	80.606	ENSACAG00000014989	SMG7	96	80.866	Anolis_carolinensis
ENSUAMG00000017473	SMG7	100	93.151	ENSANAG00000028114	SMG7	96	93.151	Aotus_nancymaae
ENSUAMG00000017473	SMG7	100	64.114	ENSACLG00000022079	smg7	96	63.693	Astatotilapia_calliptera
ENSUAMG00000017473	SMG7	100	66.516	ENSAMXG00000020809	smg7	96	66.817	Astyanax_mexicanus
ENSUAMG00000017473	SMG7	100	92.877	ENSBTAG00000008003	SMG7	96	92.877	Bos_taurus
ENSUAMG00000017473	SMG7	100	93.059	ENSCJAG00000005135	SMG7	96	93.059	Callithrix_jacchus
ENSUAMG00000017473	SMG7	100	94.353	ENSCAFG00000013276	SMG7	94	94.353	Canis_familiaris
ENSUAMG00000017473	SMG7	100	94.698	ENSCAFG00020015475	SMG7	96	94.698	Canis_lupus_dingo
ENSUAMG00000017473	SMG7	100	92.539	ENSCHIG00000018192	SMG7	96	92.539	Capra_hircus
ENSUAMG00000017473	SMG7	100	92.694	ENSTSYG00000002667	SMG7	96	92.694	Carlito_syrichta
ENSUAMG00000017473	SMG7	100	92.714	ENSCPOG00000008906	SMG7	97	92.714	Cavia_porcellus
ENSUAMG00000017473	SMG7	100	93.425	ENSCCAG00000028596	SMG7	96	93.425	Cebus_capucinus
ENSUAMG00000017473	SMG7	100	93.516	ENSCATG00000011063	SMG7	96	93.516	Cercocebus_atys
ENSUAMG00000017473	SMG7	100	92.603	ENSCLAG00000010751	SMG7	96	92.603	Chinchilla_lanigera
ENSUAMG00000017473	SMG7	100	92.994	ENSCSAG00000012654	SMG7	94	92.994	Chlorocebus_sabaeus
ENSUAMG00000017473	SMG7	95	87.966	ENSCHOG00000010522	SMG7	93	88.443	Choloepus_hoffmanni
ENSUAMG00000017473	SMG7	100	87.158	ENSCPBG00000015724	SMG7	96	87.067	Chrysemys_picta_bellii
ENSUAMG00000017473	SMG7	100	93.425	ENSCANG00000015680	SMG7	96	93.425	Colobus_angolensis_palliatus
ENSUAMG00000017473	SMG7	100	91.766	ENSCGRG00001013705	Smg7	96	91.583	Cricetulus_griseus_chok1gshd
ENSUAMG00000017473	SMG7	100	91.766	ENSCGRG00000018401	Smg7	97	91.583	Cricetulus_griseus_crigri
ENSUAMG00000017473	SMG7	100	61.695	ENSCVAG00000011842	smg7	98	61.606	Cyprinodon_variegatus
ENSUAMG00000017473	SMG7	100	65.650	ENSDARG00000060767	smg7	96	64.425	Danio_rerio
ENSUAMG00000017473	SMG7	100	91.811	ENSDORG00000007331	Smg7	96	91.811	Dipodomys_ordii
ENSUAMG00000017473	SMG7	96	90.584	ENSETEG00000002654	SMG7	96	90.678	Echinops_telfairi
ENSUAMG00000017473	SMG7	100	93.813	ENSEASG00005006524	SMG7	96	93.813	Equus_asinus_asinus
ENSUAMG00000017473	SMG7	100	98.379	ENSECAG00000004313	SMG7	99	93.802	Equus_caballus
ENSUAMG00000017473	SMG7	96	92.850	ENSEEUG00000002024	SMG7	91	92.850	Erinaceus_europaeus
ENSUAMG00000017473	SMG7	100	65.634	ENSELUG00000010293	smg7	96	65.258	Esox_lucius
ENSUAMG00000017473	SMG7	100	98.569	ENSFCAG00000010900	SMG7	99	98.544	Felis_catus
ENSUAMG00000017473	SMG7	100	78.559	ENSFALG00000003047	SMG7	98	78.559	Ficedula_albicollis
ENSUAMG00000017473	SMG7	100	91.538	ENSFDAG00000012121	SMG7	97	91.629	Fukomys_damarensis
ENSUAMG00000017473	SMG7	100	61.566	ENSFHEG00000011073	smg7	96	61.956	Fundulus_heteroclitus
ENSUAMG00000017473	SMG7	84	66.821	ENSGMOG00000004916	smg7	76	66.821	Gadus_morhua
ENSUAMG00000017473	SMG7	100	85.572	ENSGALG00000004667	SMG7	96	85.481	Gallus_gallus
ENSUAMG00000017473	SMG7	100	61.786	ENSGAFG00000019000	smg7	96	61.773	Gambusia_affinis
ENSUAMG00000017473	SMG7	97	61.525	ENSGACG00000001634	smg7	96	61.538	Gasterosteus_aculeatus
ENSUAMG00000017473	SMG7	100	93.333	ENSGGOG00000002342	SMG7	96	93.333	Gorilla_gorilla
ENSUAMG00000017473	SMG7	100	62.896	ENSHBUG00000003726	smg7	96	62.318	Haplochromis_burtoni
ENSUAMG00000017473	SMG7	100	92.877	ENSHGLG00000009353	SMG7	98	91.902	Heterocephalus_glaber_female
ENSUAMG00000017473	SMG7	100	92.968	ENSHGLG00100009637	-	96	92.968	Heterocephalus_glaber_male
ENSUAMG00000017473	SMG7	100	84.076	ENSHGLG00100004878	-	96	84.167	Heterocephalus_glaber_male
ENSUAMG00000017473	SMG7	100	66.304	ENSIPUG00000016997	smg7	97	65.909	Ictalurus_punctatus
ENSUAMG00000017473	SMG7	100	97.807	ENSSTOG00000000401	SMG7	96	97.807	Ictidomys_tridecemlineatus
ENSUAMG00000017473	SMG7	100	90.719	ENSJJAG00000012351	Smg7	96	90.537	Jaculus_jaculus
ENSUAMG00000017473	SMG7	100	59.982	ENSKMAG00000004900	smg7	99	60.657	Kryptolebias_marmoratus
ENSUAMG00000017473	SMG7	100	64.318	ENSLBEG00000002983	smg7	96	64.050	Labrus_bergylta
ENSUAMG00000017473	SMG7	52	64.623	ENSLBEG00000005220	-	75	64.623	Labrus_bergylta
ENSUAMG00000017473	SMG7	100	72.956	ENSLACG00000000972	SMG7	96	72.874	Latimeria_chalumnae
ENSUAMG00000017473	SMG7	100	63.457	ENSLOCG00000002010	smg7	96	63.402	Lepisosteus_oculatus
ENSUAMG00000017473	SMG7	100	92.630	ENSLAFG00000008186	SMG7	96	92.630	Loxodonta_africana
ENSUAMG00000017473	SMG7	100	97.712	ENSMFAG00000031653	SMG7	94	97.712	Macaca_fascicularis
ENSUAMG00000017473	SMG7	100	93.516	ENSMMUG00000018458	SMG7	96	93.516	Macaca_mulatta
ENSUAMG00000017473	SMG7	100	93.516	ENSMNEG00000034798	SMG7	96	93.516	Macaca_nemestrina
ENSUAMG00000017473	SMG7	100	93.516	ENSMLEG00000037170	SMG7	96	93.516	Mandrillus_leucophaeus
ENSUAMG00000017473	SMG7	87	62.260	ENSMAMG00000018733	smg7	82	62.348	Mastacembelus_armatus
ENSUAMG00000017473	SMG7	100	63.975	ENSMZEG00005015247	smg7	96	63.693	Maylandia_zebra
ENSUAMG00000017473	SMG7	98	85.093	ENSMGAG00000001561	SMG7	95	85.000	Meleagris_gallopavo
ENSUAMG00000017473	SMG7	100	92.223	ENSMAUG00000019484	Smg7	97	91.538	Mesocricetus_auratus
ENSUAMG00000017473	SMG7	100	93.693	ENSMICG00000007145	SMG7	96	93.693	Microcebus_murinus
ENSUAMG00000017473	SMG7	100	91.872	ENSMOCG00000020748	Smg7	96	91.689	Microtus_ochrogaster
ENSUAMG00000017473	SMG7	100	61.538	ENSMMOG00000001524	smg7	96	61.918	Mola_mola
ENSUAMG00000017473	SMG7	92	88.812	ENSMODG00000007139	SMG7	96	88.911	Monodelphis_domestica
ENSUAMG00000017473	SMG7	100	63.280	ENSMALG00000000061	smg7	90	63.790	Monopterus_albus
ENSUAMG00000017473	SMG7	100	91.689	MGP_CAROLIEiJ_G0014704	Smg7	96	91.689	Mus_caroli
ENSUAMG00000017473	SMG7	100	91.598	ENSMUSG00000042772	Smg7	96	91.416	Mus_musculus
ENSUAMG00000017473	SMG7	100	91.598	MGP_PahariEiJ_G0027940	Smg7	96	91.416	Mus_pahari
ENSUAMG00000017473	SMG7	100	91.689	MGP_SPRETEiJ_G0015511	Smg7	96	91.507	Mus_spretus
ENSUAMG00000017473	SMG7	100	94.627	ENSMPUG00000011732	SMG7	95	94.627	Mustela_putorius_furo
ENSUAMG00000017473	SMG7	100	92.903	ENSMLUG00000015417	SMG7	96	92.903	Myotis_lucifugus
ENSUAMG00000017473	SMG7	100	92.048	ENSNGAG00000009836	Smg7	97	91.712	Nannospalax_galili
ENSUAMG00000017473	SMG7	100	59.946	ENSNBRG00000024343	smg7	98	60.161	Neolamprologus_brichardi
ENSUAMG00000017473	SMG7	100	93.607	ENSNLEG00000018018	SMG7	96	93.607	Nomascus_leucogenys
ENSUAMG00000017473	SMG7	76	77.935	ENSMEUG00000004681	SMG7	74	78.382	Notamacropus_eugenii
ENSUAMG00000017473	SMG7	96	81.527	ENSOPRG00000013942	SMG7	93	81.527	Ochotona_princeps
ENSUAMG00000017473	SMG7	100	92.511	ENSODEG00000010390	SMG7	96	92.511	Octodon_degus
ENSUAMG00000017473	SMG7	100	63.709	ENSONIG00000000277	smg7	96	63.289	Oreochromis_niloticus
ENSUAMG00000017473	SMG7	100	86.570	ENSOANG00000000994	SMG7	98	86.661	Ornithorhynchus_anatinus
ENSUAMG00000017473	SMG7	100	85.714	ENSOCUG00000005887	SMG7	90	85.896	Oryctolagus_cuniculus
ENSUAMG00000017473	SMG7	100	61.656	ENSORLG00000007314	smg7	96	62.196	Oryzias_latipes
ENSUAMG00000017473	SMG7	100	62.016	ENSORLG00020015779	smg7	96	62.556	Oryzias_latipes_hni
ENSUAMG00000017473	SMG7	100	62.157	ENSORLG00015012289	smg7	96	62.152	Oryzias_latipes_hsok
ENSUAMG00000017473	SMG7	100	60.281	ENSOMEG00000002328	smg7	96	60.755	Oryzias_melastigma
ENSUAMG00000017473	SMG7	96	92.271	ENSOGAG00000003107	SMG7	90	91.800	Otolemur_garnettii
ENSUAMG00000017473	SMG7	100	96.759	ENSOARG00000001352	SMG7	98	96.759	Ovis_aries
ENSUAMG00000017473	SMG7	100	93.516	ENSPPAG00000031619	SMG7	96	93.516	Pan_paniscus
ENSUAMG00000017473	SMG7	100	94.607	ENSPPRG00000011222	SMG7	96	94.607	Panthera_pardus
ENSUAMG00000017473	SMG7	100	90.472	ENSPTIG00000007242	SMG7	100	90.472	Panthera_tigris_altaica
ENSUAMG00000017473	SMG7	100	93.516	ENSPTRG00000001764	SMG7	96	93.516	Pan_troglodytes
ENSUAMG00000017473	SMG7	100	93.516	ENSPANG00000004520	SMG7	96	93.516	Papio_anubis
ENSUAMG00000017473	SMG7	100	62.511	ENSPKIG00000007242	smg7	96	63.263	Paramormyrops_kingsleyae
ENSUAMG00000017473	SMG7	100	87.156	ENSPSIG00000012201	SMG7	98	86.514	Pelodiscus_sinensis
ENSUAMG00000017473	SMG7	73	41.044	ENSPMGG00000021833	smg7	98	41.617	Periophthalmus_magnuspinnatus
ENSUAMG00000017473	SMG7	100	92.651	ENSPEMG00000011315	Smg7	97	92.465	Peromyscus_maniculatus_bairdii
ENSUAMG00000017473	SMG7	100	88.595	ENSPCIG00000003786	SMG7	96	88.504	Phascolarctos_cinereus
ENSUAMG00000017473	SMG7	100	58.818	ENSPFOG00000019219	smg7	97	58.818	Poecilia_formosa
ENSUAMG00000017473	SMG7	100	61.628	ENSPLAG00000001446	smg7	96	61.538	Poecilia_latipinna
ENSUAMG00000017473	SMG7	96	60.777	ENSPMEG00000005218	smg7	96	60.685	Poecilia_mexicana
ENSUAMG00000017473	SMG7	86	58.738	ENSPREG00000019039	smg7	88	59.359	Poecilia_reticulata
ENSUAMG00000017473	SMG7	100	93.607	ENSPPYG00000000427	SMG7	96	93.607	Pongo_abelii
ENSUAMG00000017473	SMG7	90	88.036	ENSPCAG00000008360	SMG7	87	88.036	Procavia_capensis
ENSUAMG00000017473	SMG7	100	97.805	ENSPCOG00000011996	SMG7	96	97.805	Propithecus_coquereli
ENSUAMG00000017473	SMG7	91	87.289	ENSPVAG00000000851	SMG7	86	87.289	Pteropus_vampyrus
ENSUAMG00000017473	SMG7	100	63.961	ENSPNYG00000007643	smg7	96	63.450	Pundamilia_nyererei
ENSUAMG00000017473	SMG7	100	65.827	ENSPNAG00000011374	smg7	96	65.468	Pygocentrus_nattereri
ENSUAMG00000017473	SMG7	100	91.971	ENSRNOG00000027962	Smg7	100	96.429	Rattus_norvegicus
ENSUAMG00000017473	SMG7	100	93.425	ENSRBIG00000036316	SMG7	96	93.425	Rhinopithecus_bieti
ENSUAMG00000017473	SMG7	100	93.425	ENSRROG00000035719	SMG7	96	93.425	Rhinopithecus_roxellana
ENSUAMG00000017473	SMG7	100	97.426	ENSSBOG00000023454	SMG7	96	97.426	Saimiri_boliviensis_boliviensis
ENSUAMG00000017473	SMG7	100	88.595	ENSSHAG00000013147	SMG7	96	88.332	Sarcophilus_harrisii
ENSUAMG00000017473	SMG7	100	66.878	ENSSFOG00015017252	smg7	98	66.060	Scleropages_formosus
ENSUAMG00000017473	SMG7	100	63.889	ENSSMAG00000006067	smg7	99	63.432	Scophthalmus_maximus
ENSUAMG00000017473	SMG7	100	62.742	ENSSDUG00000017543	smg7	96	63.158	Seriola_dumerili
ENSUAMG00000017473	SMG7	100	85.623	ENSSPUG00000002064	SMG7	96	85.532	Sphenodon_punctatus
ENSUAMG00000017473	SMG7	100	65.202	ENSSPAG00000008733	smg7	96	64.690	Stegastes_partitus
ENSUAMG00000017473	SMG7	100	98.093	ENSSSCG00000015558	SMG7	96	98.093	Sus_scrofa
ENSUAMG00000017473	SMG7	100	85.662	ENSTGUG00000003928	SMG7	97	85.662	Taeniopygia_guttata
ENSUAMG00000017473	SMG7	100	60.836	ENSTNIG00000002802	smg7	96	60.245	Tetraodon_nigroviridis
ENSUAMG00000017473	SMG7	76	92.228	ENSTBEG00000003220	SMG7	68	95.161	Tupaia_belangeri
ENSUAMG00000017473	SMG7	96	93.032	ENSTTRG00000014778	SMG7	91	93.032	Tursiops_truncatus
ENSUAMG00000017473	SMG7	100	100.000	ENSUMAG00000016389	SMG7	100	100.000	Ursus_maritimus
ENSUAMG00000017473	SMG7	100	99.046	ENSVVUG00000008976	SMG7	96	99.046	Vulpes_vulpes
ENSUAMG00000017473	SMG7	100	68.817	ENSXETG00000012528	smg7	96	69.037	Xenopus_tropicalis
ENSUAMG00000017473	SMG7	100	62.032	ENSXMAG00000007123	smg7	96	62.121	Xiphophorus_maculatus