EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSUAMG00000017682 (Gene tree)
Gene ID
-
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Ursus_americanus
Status
putative
Strand
Plus strand
Length
19099 bases
Position
chrLZNR01000557.1:304550-323648
Accession
15797
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUAMP00000022518PABPPF00658.182.7e-2711
ENSUAMP00000022520PABPPF00658.187.2e-2511
ENSUAMP00000022518RRM_5PF13893.62.4e-0811
ENSUAMP00000022518RRM_1PF00076.221.1e-8914
ENSUAMP00000022518RRM_1PF00076.221.1e-8924
ENSUAMP00000022518RRM_1PF00076.221.1e-8934
ENSUAMP00000022518RRM_1PF00076.221.1e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUAMT00000025163PABPC1L-202459-ENSUAMP00000022520152 (aa)--
ENSUAMT00000025161PABPC1L-2011761-ENSUAMP00000022518586 (aa)--
Gene Model
Click here to download ENSUAMG00000017682's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000017682's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSUAMG00000017682PABPC1L9841.648ENSUAMG00000022453-9741.648
ENSUAMG00000017682PABPC1L6235.979ENSUAMG00000022468SF3B45435.979
ENSUAMG00000017682PABPC1L6136.905ENSUAMG00000009532TIAL18636.905
ENSUAMG00000017682PABPC1L9967.773ENSUAMG00000024428PABPC19967.810
ENSUAMG00000017682PABPC1L9965.032ENSUAMG00000000303PABPC49963.975
ENSUAMG00000017682PABPC1L6634.940ENSUAMG00000013026ELAVL49134.940
ENSUAMG00000017682PABPC1L6460.335ENSUAMG00000013627PABPC59660.274
ENSUAMG00000017682PABPC1L5235.616ENSUAMG00000019567CELF39635.616
ENSUAMG00000017682PABPC1L6371.574ENSUAMG00000008089-9971.574
ENSUAMG00000017682PABPC1L6640.278ENSUAMG00000000405ELAVL39234.940
ENSUAMG00000017682PABPC1L6464.738ENSUAMG00000001289PABPC4L9864.738
ENSUAMG00000017682PABPC1L5042.105ENSUAMG00000013289RBM35142.105
ENSUAMG00000017682PABPC1L6636.145ENSUAMG00000018679ELAVL29236.145
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUAMG00000017682PABPC1L9985.667ENSG00000101104PABPC1L9994.444Homo_sapiens
ENSUAMG00000017682PABPC1L9965.802ENSAPOG00000010842pabpc1l9965.964Acanthochromis_polyacanthus
ENSUAMG00000017682PABPC1L9880.251ENSAMEG00000004099PABPC1L10080.655Ailuropoda_melanoleuca
ENSUAMG00000017682PABPC1L9966.829ENSACIG00000021004-9967.207Amphilophus_citrinellus
ENSUAMG00000017682PABPC1L9965.655ENSAOCG00000006167-9965.655Amphiprion_ocellaris
ENSUAMG00000017682PABPC1L9079.661ENSAPEG00000010558-9781.188Amphiprion_percula
ENSUAMG00000017682PABPC1L9967.758ENSATEG00000007428pabpc1l9967.758Anabas_testudineus
ENSUAMG00000017682PABPC1L9872.431ENSAPLG00000008415PABPC1L9972.375Anas_platyrhynchos
ENSUAMG00000017682PABPC1L9971.589ENSACAG00000011841PABPC1L9871.589Anolis_carolinensis
ENSUAMG00000017682PABPC1L9984.185ENSANAG00000026826PABPC1L9984.185Aotus_nancymaae
ENSUAMG00000017682PABPC1L9965.650ENSACLG00000024791pabpc1l9965.650Astatotilapia_calliptera
ENSUAMG00000017682PABPC1L9969.649ENSAMXG00000013552pabpc1l9969.649Astyanax_mexicanus
ENSUAMG00000017682PABPC1L9873.333ENSBTAG00000050862-9561.582Bos_taurus
ENSUAMG00000017682PABPC1L7080.000ENSBTAG00000016849PABPC1L8580.000Bos_taurus
ENSUAMG00000017682PABPC1L6297.619ENSBTAG00000055300-10097.619Bos_taurus
ENSUAMG00000017682PABPC1L6278.736ENSCJAG00000038506-10078.736Callithrix_jacchus
ENSUAMG00000017682PABPC1L9984.514ENSCJAG00000017628PABPC1L9984.514Callithrix_jacchus
ENSUAMG00000017682PABPC1L9891.383ENSCAFG00000009573PABPC1L10091.383Canis_familiaris
ENSUAMG00000017682PABPC1L10089.216ENSCAFG00020013828PABPC1L10089.216Canis_lupus_dingo
ENSUAMG00000017682PABPC1L9784.899ENSCHIG00000025759PABPC1L9184.899Capra_hircus
ENSUAMG00000017682PABPC1L9982.372ENSTSYG00000006645PABPC1L9982.372Carlito_syrichta
ENSUAMG00000017682PABPC1L9777.111ENSCAPG00000014519PABPC1L9977.111Cavia_aperea
ENSUAMG00000017682PABPC1L9979.869ENSCPOG00000013633PABPC1L9979.869Cavia_porcellus
ENSUAMG00000017682PABPC1L9983.855ENSCCAG00000023338PABPC1L9983.855Cebus_capucinus
ENSUAMG00000017682PABPC1L9986.161ENSCATG00000034065PABPC1L9986.161Cercocebus_atys
ENSUAMG00000017682PABPC1L9980.196ENSCLAG00000005298PABPC1L9980.196Chinchilla_lanigera
ENSUAMG00000017682PABPC1L9985.997ENSCSAG00000014242PABPC1L9985.997Chlorocebus_sabaeus
ENSUAMG00000017682PABPC1L5681.061ENSCPBG00000007810-8181.061Chrysemys_picta_bellii
ENSUAMG00000017682PABPC1L9157.971ENSCPBG00000017765-8762.400Chrysemys_picta_bellii
ENSUAMG00000017682PABPC1L7583.673ENSCPBG00000017755-9983.673Chrysemys_picta_bellii
ENSUAMG00000017682PABPC1L8879.487ENSCING00000002796-7979.487Ciona_intestinalis
ENSUAMG00000017682PABPC1L9767.143ENSCSAVG00000004246-9859.543Ciona_savignyi
ENSUAMG00000017682PABPC1L9758.276ENSCSAVG00000003102-10080.822Ciona_savignyi
ENSUAMG00000017682PABPC1L9984.132ENSCANG00000037530PABPC1L9984.132Colobus_angolensis_palliatus
ENSUAMG00000017682PABPC1L9972.712ENSCGRG00001021938Pabpc1l9972.712Cricetulus_griseus_chok1gshd
ENSUAMG00000017682PABPC1L9972.712ENSCGRG00000007946Pabpc1l9972.712Cricetulus_griseus_crigri
ENSUAMG00000017682PABPC1L9966.839ENSCSEG00000021295pabpc1l9966.839Cynoglossus_semilaevis
ENSUAMG00000017682PABPC1L8979.762ENSCVAG00000015943-8687.023Cyprinodon_variegatus
ENSUAMG00000017682PABPC1L9968.910ENSDARG00000002597pabpc1l8887.692Danio_rerio
ENSUAMG00000017682PABPC1L9986.326ENSDNOG00000048450PABPC1L9986.326Dasypus_novemcinctus
ENSUAMG00000017682PABPC1L9982.372ENSDORG00000001067Pabpc1l9982.372Dipodomys_ordii
ENSUAMG00000017682PABPC1L9491.057ENSETEG00000009969PABPC1L7291.057Echinops_telfairi
ENSUAMG00000017682PABPC1L6297.024ENSEASG00005023408-10097.024Equus_asinus_asinus
ENSUAMG00000017682PABPC1L9680.952ENSEASG00005023406-9180.952Equus_asinus_asinus
ENSUAMG00000017682PABPC1L5981.250ENSEASG00005023407-7781.250Equus_asinus_asinus
ENSUAMG00000017682PABPC1L6989.868ENSECAG00000040139-8189.868Equus_caballus
ENSUAMG00000017682PABPC1L9878.667ENSECAG00000022681PABPC1L9968.862Equus_caballus
ENSUAMG00000017682PABPC1L9981.596ENSEEUG00000005978PABPC1L9981.596Erinaceus_europaeus
ENSUAMG00000017682PABPC1L9969.880ENSELUG00000001811pabpc1l9969.880Esox_lucius
ENSUAMG00000017682PABPC1L10089.853ENSFCAG00000011692PABPC1L10089.853Felis_catus
ENSUAMG00000017682PABPC1L8279.388ENSFALG00000005372PABPC1L8279.388Ficedula_albicollis
ENSUAMG00000017682PABPC1L9985.254ENSFDAG00000008291PABPC1L9985.254Fukomys_damarensis
ENSUAMG00000017682PABPC1L9967.685ENSFHEG00000003398pabpc1l9967.685Fundulus_heteroclitus
ENSUAMG00000017682PABPC1L10067.532ENSGMOG00000004437pabpc1l9967.590Gadus_morhua
ENSUAMG00000017682PABPC1L9874.731ENSGALG00000004123PABPC1L9985.372Gallus_gallus
ENSUAMG00000017682PABPC1L9963.070ENSGAFG00000021057pabpc1l9963.070Gambusia_affinis
ENSUAMG00000017682PABPC1L9965.335ENSGACG00000002792pabpc1l10065.335Gasterosteus_aculeatus
ENSUAMG00000017682PABPC1L9975.517ENSGAGG00000000589PABPC1L9875.517Gopherus_agassizii
ENSUAMG00000017682PABPC1L9985.667ENSGGOG00000004584PABPC1L9985.667Gorilla_gorilla
ENSUAMG00000017682PABPC1L9967.116ENSHBUG00000006134pabpc1l9967.116Haplochromis_burtoni
ENSUAMG00000017682PABPC1L9982.178ENSHGLG00000008434PABPC1L9982.178Heterocephalus_glaber_female
ENSUAMG00000017682PABPC1L9982.178ENSHGLG00100012151PABPC1L9982.178Heterocephalus_glaber_male
ENSUAMG00000017682PABPC1L6183.708ENSHGLG00100019506-10083.708Heterocephalus_glaber_male
ENSUAMG00000017682PABPC1L9868.465ENSHCOG00000009270pabpc1l9969.454Hippocampus_comes
ENSUAMG00000017682PABPC1L9970.805ENSIPUG00000012602pabpc1l9970.805Ictalurus_punctatus
ENSUAMG00000017682PABPC1L5563.846ENSIPUG00000005537-10063.846Ictalurus_punctatus
ENSUAMG00000017682PABPC1L6260.920ENSIPUG00000006780-8560.920Ictalurus_punctatus
ENSUAMG00000017682PABPC1L6260.345ENSIPUG00000006760-8860.345Ictalurus_punctatus
ENSUAMG00000017682PABPC1L9984.679ENSSTOG00000003739PABPC1L9984.679Ictidomys_tridecemlineatus
ENSUAMG00000017682PABPC1L9965.265ENSJJAG00000022406Pabpc1l9962.316Jaculus_jaculus
ENSUAMG00000017682PABPC1L9967.810ENSKMAG00000016847pabpc1l9967.810Kryptolebias_marmoratus
ENSUAMG00000017682PABPC1L9964.800ENSLBEG00000010084pabpc1l9964.800Labrus_bergylta
ENSUAMG00000017682PABPC1L9968.045ENSLACG00000005762PABPC1L9868.045Latimeria_chalumnae
ENSUAMG00000017682PABPC1L10069.414ENSLOCG00000007519pabpc1l9969.414Lepisosteus_oculatus
ENSUAMG00000017682PABPC1L9982.212ENSLAFG00000003553PABPC1L10082.212Loxodonta_africana
ENSUAMG00000017682PABPC1L9986.161ENSMFAG00000040365PABPC1L9986.161Macaca_fascicularis
ENSUAMG00000017682PABPC1L8881.343ENSMMUG00000013209-9980.952Macaca_mulatta
ENSUAMG00000017682PABPC1L9984.401ENSMNEG00000032298PABPC1L9984.401Macaca_nemestrina
ENSUAMG00000017682PABPC1L9986.161ENSMLEG00000043139PABPC1L9986.161Mandrillus_leucophaeus
ENSUAMG00000017682PABPC1L9865.512ENSMAMG00000011854pabpc1l9865.512Mastacembelus_armatus
ENSUAMG00000017682PABPC1L9965.650ENSMZEG00005023713pabpc1l9965.650Maylandia_zebra
ENSUAMG00000017682PABPC1L9973.948ENSMGAG00000003674PABPC1L9874.188Meleagris_gallopavo
ENSUAMG00000017682PABPC1L9876.667ENSMICG00000000974-9976.871Microcebus_murinus
ENSUAMG00000017682PABPC1L9972.549ENSMOCG00000013186Pabpc1l9972.549Microtus_ochrogaster
ENSUAMG00000017682PABPC1L9968.243ENSMMOG00000020574-9087.692Mola_mola
ENSUAMG00000017682PABPC1L9476.844ENSMODG00000016198PABPC1L9977.000Monodelphis_domestica
ENSUAMG00000017682PABPC1L9665.182ENSMALG00000021622pabpc1l10065.182Monopterus_albus
ENSUAMG00000017682PABPC1L9973.366MGP_CAROLIEiJ_G0024627Pabpc1l9973.366Mus_caroli
ENSUAMG00000017682PABPC1L9972.934ENSMUSG00000054582Pabpc1l10072.934Mus_musculus
ENSUAMG00000017682PABPC1L9973.899MGP_PahariEiJ_G0026071Pabpc1l9973.899Mus_pahari
ENSUAMG00000017682PABPC1L9973.096MGP_SPRETEiJ_G0025549Pabpc1l10073.096Mus_spretus
ENSUAMG00000017682PABPC1L10088.406ENSMPUG00000017646PABPC1L10088.406Mustela_putorius_furo
ENSUAMG00000017682PABPC1L9878.387ENSMLUG00000006324PABPC1L9878.387Myotis_lucifugus
ENSUAMG00000017682PABPC1L9975.817ENSNGAG00000010458Pabpc1l9975.817Nannospalax_galili
ENSUAMG00000017682PABPC1L9867.207ENSNBRG00000016633pabpc1l9967.027Neolamprologus_brichardi
ENSUAMG00000017682PABPC1L9078.986ENSNLEG00000006653-8978.000Nomascus_leucogenys
ENSUAMG00000017682PABPC1L8973.636ENSMEUG00000007905-8973.636Notamacropus_eugenii
ENSUAMG00000017682PABPC1L9982.566ENSOPRG00000011846PABPC1L9982.566Ochotona_princeps
ENSUAMG00000017682PABPC1L9973.554ENSODEG00000015482PABPC1L9973.554Octodon_degus
ENSUAMG00000017682PABPC1L6176.875ENSODEG00000002920-9776.875Octodon_degus
ENSUAMG00000017682PABPC1L9965.811ENSONIG00000017314pabpc1l9965.811Oreochromis_niloticus
ENSUAMG00000017682PABPC1L8966.546ENSOANG00000015793-10066.546Ornithorhynchus_anatinus
ENSUAMG00000017682PABPC1L9975.772ENSOCUG00000003005PABPC1L9975.772Oryctolagus_cuniculus
ENSUAMG00000017682PABPC1L9969.178ENSORLG00000010322pabpc1l9969.178Oryzias_latipes
ENSUAMG00000017682PABPC1L9967.979ENSORLG00020021193pabpc1l9967.979Oryzias_latipes_hni
ENSUAMG00000017682PABPC1L9669.312ENSORLG00015017018pabpc1l9769.312Oryzias_latipes_hsok
ENSUAMG00000017682PABPC1L9962.748ENSOMEG00000010789pabpc1l9962.748Oryzias_melastigma
ENSUAMG00000017682PABPC1L9982.287ENSOGAG00000032999PABPC1L9982.287Otolemur_garnettii
ENSUAMG00000017682PABPC1L9984.853ENSOARG00000004578PABPC1L10084.853Ovis_aries
ENSUAMG00000017682PABPC1L9985.502ENSPPAG00000039677PABPC1L9985.502Pan_paniscus
ENSUAMG00000017682PABPC1L6683.642ENSPPRG00000019327-9883.642Panthera_pardus
ENSUAMG00000017682PABPC1L9591.034ENSPPRG00000020242-9991.034Panthera_pardus
ENSUAMG00000017682PABPC1L9889.701ENSPTIG00000006524PABPC1L9989.701Panthera_tigris_altaica
ENSUAMG00000017682PABPC1L6694.136ENSPTRG00000013531PABPC1L9994.136Pan_troglodytes
ENSUAMG00000017682PABPC1L9080.435ENSPTRG00000044192-8980.000Pan_troglodytes
ENSUAMG00000017682PABPC1L9986.161ENSPANG00000018788PABPC1L9986.161Papio_anubis
ENSUAMG00000017682PABPC1L9968.960ENSPKIG00000007322pabpc1l9968.960Paramormyrops_kingsleyae
ENSUAMG00000017682PABPC1L5684.733ENSPKIG00000016810-9384.733Paramormyrops_kingsleyae
ENSUAMG00000017682PABPC1L7184.652ENSPSIG00000013289PABPC1L9984.652Pelodiscus_sinensis
ENSUAMG00000017682PABPC1L7567.337ENSPMGG00000023121-9367.337Periophthalmus_magnuspinnatus
ENSUAMG00000017682PABPC1L6686.364ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSUAMG00000017682PABPC1L9972.876ENSPEMG00000020671Pabpc1l9972.876Peromyscus_maniculatus_bairdii
ENSUAMG00000017682PABPC1L9967.642ENSPFOG00000013241pabpc1l9867.642Poecilia_formosa
ENSUAMG00000017682PABPC1L5588.462ENSPLAG00000023686-9288.462Poecilia_latipinna
ENSUAMG00000017682PABPC1L9970.017ENSPLAG00000017490-9970.017Poecilia_latipinna
ENSUAMG00000017682PABPC1L9966.506ENSPMEG00000007677pabpc1l9966.506Poecilia_mexicana
ENSUAMG00000017682PABPC1L5588.462ENSPMEG00000009185-8888.462Poecilia_mexicana
ENSUAMG00000017682PABPC1L7077.240ENSPREG00000015886pabpc1l9977.240Poecilia_reticulata
ENSUAMG00000017682PABPC1L5279.747ENSPREG00000015197-9160.465Poecilia_reticulata
ENSUAMG00000017682PABPC1L9985.667ENSPPYG00000011042PABPC1L9985.667Pongo_abelii
ENSUAMG00000017682PABPC1L6595.312ENSPCAG00000011787-7595.312Procavia_capensis
ENSUAMG00000017682PABPC1L9983.196ENSPCOG00000020630PABPC1L9983.196Propithecus_coquereli
ENSUAMG00000017682PABPC1L9984.779ENSPVAG00000012663PABPC1L10084.779Pteropus_vampyrus
ENSUAMG00000017682PABPC1L9966.949ENSPNYG00000004101pabpc1l9966.949Pundamilia_nyererei
ENSUAMG00000017682PABPC1L9962.620ENSPNAG00000021248pabpc1l9962.620Pygocentrus_nattereri
ENSUAMG00000017682PABPC1L9973.203ENSRNOG00000012750Pabpc1l9973.203Rattus_norvegicus
ENSUAMG00000017682PABPC1L9985.832ENSRBIG00000035381PABPC1L9985.832Rhinopithecus_bieti
ENSUAMG00000017682PABPC1L9985.502ENSRROG00000044498PABPC1L9985.502Rhinopithecus_roxellana
ENSUAMG00000017682PABPC1L9984.020ENSSBOG00000009532-9984.020Saimiri_boliviensis_boliviensis
ENSUAMG00000017682PABPC1L9661.905ENSSBOG00000020828-8660.959Saimiri_boliviensis_boliviensis
ENSUAMG00000017682PABPC1L9770.287ENSSHAG00000011446PABPC1L10070.287Sarcophilus_harrisii
ENSUAMG00000017682PABPC1L9970.257ENSSFOG00015017304pabpc1l9970.257Scleropages_formosus
ENSUAMG00000017682PABPC1L9868.259ENSSMAG00000010516pabpc1l9387.597Scophthalmus_maximus
ENSUAMG00000017682PABPC1L9967.423ENSSDUG00000014743pabpc1l9967.423Seriola_dumerili
ENSUAMG00000017682PABPC1L9868.288ENSSLDG00000006981pabpc1l9878.539Seriola_lalandi_dorsalis
ENSUAMG00000017682PABPC1L9971.520ENSSPUG00000004233PABPC1L9871.520Sphenodon_punctatus
ENSUAMG00000017682PABPC1L9968.439ENSSPAG00000017137pabpc1l9968.439Stegastes_partitus
ENSUAMG00000017682PABPC1L9985.386ENSSSCG00000007382PABPC1L9985.386Sus_scrofa
ENSUAMG00000017682PABPC1L9972.496ENSTGUG00000005114PABPC1L9972.496Taeniopygia_guttata
ENSUAMG00000017682PABPC1L9666.283ENSTRUG00000011085pabpc1l9766.283Takifugu_rubripes
ENSUAMG00000017682PABPC1L9964.309ENSTNIG00000017903pabpc1l9864.309Tetraodon_nigroviridis
ENSUAMG00000017682PABPC1L9394.178ENSTBEG00000002851PABPC1L7994.178Tupaia_belangeri
ENSUAMG00000017682PABPC1L9484.146ENSTTRG00000007618PABPC1L10084.237Tursiops_truncatus
ENSUAMG00000017682PABPC1L7096.206ENSUMAG00000025436PABPC1L9496.206Ursus_maritimus
ENSUAMG00000017682PABPC1L9896.047ENSVVUG00000018939PABPC1L10096.047Vulpes_vulpes
ENSUAMG00000017682PABPC1L9967.788ENSXETG00000022831pabpc1l9867.788Xenopus_tropicalis
ENSUAMG00000017682PABPC1L9967.205ENSXCOG00000005459pabpc1l9983.688Xiphophorus_couchianus
ENSUAMG00000017682PABPC1L9970.017ENSXMAG00000017135pabpc1l9970.017Xiphophorus_maculatus

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