EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000018015 (Gene tree)
Gene ID: -
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 43692 bases
Position: chrLZNR01004569.1:6565-50256
Accession: 13408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000023059	Suf	PF05843.14	2e-10	1	1
ENSUAMP00000023001	Suf	PF05843.14	2.1e-10	1	1
ENSUAMP00000023092	Suf	PF05843.14	2.1e-10	1	1
ENSUAMP00000023092	S1	PF00575.23	1.1e-68	1	5
ENSUAMP00000023092	S1	PF00575.23	1.1e-68	2	5
ENSUAMP00000023092	S1	PF00575.23	1.1e-68	3	5
ENSUAMP00000023092	S1	PF00575.23	1.1e-68	4	5
ENSUAMP00000023092	S1	PF00575.23	1.1e-68	5	5
ENSUAMP00000023001	S1	PF00575.23	1e-67	1	5
ENSUAMP00000023001	S1	PF00575.23	1e-67	2	5
ENSUAMP00000023001	S1	PF00575.23	1e-67	3	5
ENSUAMP00000023001	S1	PF00575.23	1e-67	4	5
ENSUAMP00000023001	S1	PF00575.23	1e-67	5	5
ENSUAMP00000023059	S1	PF00575.23	9.7e-67	1	5
ENSUAMP00000023059	S1	PF00575.23	9.7e-67	2	5
ENSUAMP00000023059	S1	PF00575.23	9.7e-67	3	5
ENSUAMP00000023059	S1	PF00575.23	9.7e-67	4	5
ENSUAMP00000023059	S1	PF00575.23	9.7e-67	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000025761	PDCD11-202	5499	-	ENSUAMP00000023059	1832 (aa)	-	-
ENSUAMT00000025798	PDCD11-203	5628	-	ENSUAMP00000023092	1875 (aa)	-	-
ENSUAMT00000025691	PDCD11-201	5613	-	ENSUAMP00000023001	1870 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000018015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000018015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000018015	PDCD11	100	88.072	ENSG00000148843	PDCD11	99	87.753	Homo_sapiens
ENSUAMG00000018015	PDCD11	99	44.685	ENSAPOG00000015629	pdcd11	99	44.516	Acanthochromis_polyacanthus
ENSUAMG00000018015	PDCD11	100	97.280	ENSAMEG00000017935	PDCD11	99	97.280	Ailuropoda_melanoleuca
ENSUAMG00000018015	PDCD11	50	42.134	ENSACIG00000006458	-	98	41.963	Amphilophus_citrinellus
ENSUAMG00000018015	PDCD11	99	44.627	ENSAOCG00000015287	pdcd11	99	44.468	Amphiprion_ocellaris
ENSUAMG00000018015	PDCD11	60	42.615	ENSAPEG00000020240	pdcd11	97	42.743	Amphiprion_percula
ENSUAMG00000018015	PDCD11	95	61.376	ENSATEG00000021043	pdcd11	99	44.591	Anabas_testudineus
ENSUAMG00000018015	PDCD11	99	55.156	ENSAPLG00000010301	PDCD11	99	54.947	Anas_platyrhynchos
ENSUAMG00000018015	PDCD11	99	54.280	ENSACAG00000004796	PDCD11	99	69.383	Anolis_carolinensis
ENSUAMG00000018015	PDCD11	99	87.467	ENSANAG00000034576	PDCD11	99	87.147	Aotus_nancymaae
ENSUAMG00000018015	PDCD11	91	61.095	ENSACLG00000018236	pdcd11	99	61.095	Astatotilapia_calliptera
ENSUAMG00000018015	PDCD11	99	41.413	ENSAMXG00000005458	pdcd11	100	42.210	Astyanax_mexicanus
ENSUAMG00000018015	PDCD11	100	87.054	ENSBTAG00000009715	PDCD11	99	86.947	Bos_taurus
ENSUAMG00000018015	PDCD11	99	86.926	ENSCJAG00000018257	PDCD11	99	86.553	Callithrix_jacchus
ENSUAMG00000018015	PDCD11	100	93.813	ENSCAFG00000010411	PDCD11	100	93.600	Canis_familiaris
ENSUAMG00000018015	PDCD11	100	93.707	ENSCAFG00020010369	PDCD11	100	92.640	Canis_lupus_dingo
ENSUAMG00000018015	PDCD11	99	86.461	ENSCHIG00000025218	PDCD11	99	86.461	Capra_hircus
ENSUAMG00000018015	PDCD11	98	77.223	ENSTSYG00000033423	PDCD11	100	76.786	Carlito_syrichta
ENSUAMG00000018015	PDCD11	91	70.868	ENSCAPG00000005386	PDCD11	99	70.482	Cavia_aperea
ENSUAMG00000018015	PDCD11	100	80.383	ENSCPOG00000010957	PDCD11	99	81.253	Cavia_porcellus
ENSUAMG00000018015	PDCD11	99	87.300	ENSCCAG00000018950	PDCD11	99	86.766	Cebus_capucinus
ENSUAMG00000018015	PDCD11	100	88.505	ENSCATG00000044331	PDCD11	99	88.185	Cercocebus_atys
ENSUAMG00000018015	PDCD11	100	81.369	ENSCLAG00000001029	PDCD11	99	81.306	Chinchilla_lanigera
ENSUAMG00000018015	PDCD11	100	88.386	ENSCSAG00000005346	PDCD11	99	88.066	Chlorocebus_sabaeus
ENSUAMG00000018015	PDCD11	85	99.225	ENSCHOG00000004796	PDCD11	90	99.225	Choloepus_hoffmanni
ENSUAMG00000018015	PDCD11	92	70.889	ENSCPBG00000024487	PDCD11	99	75.931	Chrysemys_picta_bellii
ENSUAMG00000018015	PDCD11	93	39.514	ENSCING00000002715	-	96	39.514	Ciona_intestinalis
ENSUAMG00000018015	PDCD11	100	88.173	ENSCANG00000043300	PDCD11	99	87.960	Colobus_angolensis_palliatus
ENSUAMG00000018015	PDCD11	100	80.362	ENSCGRG00001006458	Pdcd11	99	80.202	Cricetulus_griseus_chok1gshd
ENSUAMG00000018015	PDCD11	100	80.362	ENSCGRG00000003583	Pdcd11	99	80.202	Cricetulus_griseus_crigri
ENSUAMG00000018015	PDCD11	94	56.497	ENSCSEG00000010739	pdcd11	99	43.726	Cynoglossus_semilaevis
ENSUAMG00000018015	PDCD11	94	64.035	ENSCVAG00000018903	pdcd11	96	64.035	Cyprinodon_variegatus
ENSUAMG00000018015	PDCD11	99	43.206	ENSDARG00000052480	pdcd11	99	43.100	Danio_rerio
ENSUAMG00000018015	PDCD11	100	86.185	ENSDNOG00000013838	PDCD11	99	86.026	Dasypus_novemcinctus
ENSUAMG00000018015	PDCD11	100	82.055	ENSDORG00000010420	Pdcd11	99	82.278	Dipodomys_ordii
ENSUAMG00000018015	PDCD11	60	38.924	FBgn0039182	CG5728	62	38.924	Drosophila_melanogaster
ENSUAMG00000018015	PDCD11	95	73.923	ENSETEG00000000813	PDCD11	100	73.755	Echinops_telfairi
ENSUAMG00000018015	PDCD11	66	53.767	ENSEBUG00000002358	-	93	53.767	Eptatretus_burgeri
ENSUAMG00000018015	PDCD11	96	91.978	ENSEASG00005015159	PDCD11	100	91.755	Equus_asinus_asinus
ENSUAMG00000018015	PDCD11	100	91.791	ENSECAG00000020507	PDCD11	99	91.684	Equus_caballus
ENSUAMG00000018015	PDCD11	98	86.000	ENSEEUG00000009245	PDCD11	91	86.000	Erinaceus_europaeus
ENSUAMG00000018015	PDCD11	99	45.264	ENSELUG00000004211	pdcd11	99	45.156	Esox_lucius
ENSUAMG00000018015	PDCD11	100	93.280	ENSFCAG00000002384	PDCD11	99	93.227	Felis_catus
ENSUAMG00000018015	PDCD11	99	55.603	ENSFALG00000008775	PDCD11	99	55.284	Ficedula_albicollis
ENSUAMG00000018015	PDCD11	100	80.404	ENSFDAG00000009532	PDCD11	99	80.138	Fukomys_damarensis
ENSUAMG00000018015	PDCD11	89	67.568	ENSFHEG00000022997	pdcd11	96	67.568	Fundulus_heteroclitus
ENSUAMG00000018015	PDCD11	93	43.250	ENSGMOG00000004186	pdcd11	91	57.364	Gadus_morhua
ENSUAMG00000018015	PDCD11	75	54.757	ENSGALG00000008265	PDCD11	97	54.757	Gallus_gallus
ENSUAMG00000018015	PDCD11	99	44.048	ENSGAFG00000012806	pdcd11	99	49.233	Gambusia_affinis
ENSUAMG00000018015	PDCD11	99	44.127	ENSGACG00000018233	pdcd11	96	60.105	Gasterosteus_aculeatus
ENSUAMG00000018015	PDCD11	96	59.700	ENSGAGG00000024314	PDCD11	99	59.533	Gopherus_agassizii
ENSUAMG00000018015	PDCD11	100	87.746	ENSGGOG00000011621	PDCD11	99	87.427	Gorilla_gorilla
ENSUAMG00000018015	PDCD11	95	61.478	ENSHBUG00000020226	pdcd11	99	44.301	Haplochromis_burtoni
ENSUAMG00000018015	PDCD11	100	81.203	ENSHGLG00000001462	PDCD11	99	80.937	Heterocephalus_glaber_female
ENSUAMG00000018015	PDCD11	100	80.564	ENSHGLG00100018779	PDCD11	99	80.298	Heterocephalus_glaber_male
ENSUAMG00000018015	PDCD11	99	43.203	ENSHCOG00000016006	pdcd11	99	43.109	Hippocampus_comes
ENSUAMG00000018015	PDCD11	63	40.858	ENSIPUG00000015102	pdcd11	99	42.037	Ictalurus_punctatus
ENSUAMG00000018015	PDCD11	100	84.309	ENSSTOG00000014553	PDCD11	99	83.739	Ictidomys_tridecemlineatus
ENSUAMG00000018015	PDCD11	100	82.907	ENSJJAG00000015523	Pdcd11	99	82.961	Jaculus_jaculus
ENSUAMG00000018015	PDCD11	50	41.132	ENSKMAG00000021182	pdcd11	98	41.151	Kryptolebias_marmoratus
ENSUAMG00000018015	PDCD11	99	49.149	ENSLOCG00000011818	pdcd11	99	49.601	Lepisosteus_oculatus
ENSUAMG00000018015	PDCD11	100	85.844	ENSLAFG00000008398	PDCD11	99	85.950	Loxodonta_africana
ENSUAMG00000018015	PDCD11	100	88.546	ENSMFAG00000044058	PDCD11	99	88.279	Macaca_fascicularis
ENSUAMG00000018015	PDCD11	100	88.546	ENSMMUG00000007058	PDCD11	99	88.279	Macaca_mulatta
ENSUAMG00000018015	PDCD11	100	88.492	ENSMNEG00000040726	PDCD11	99	88.226	Macaca_nemestrina
ENSUAMG00000018015	PDCD11	100	87.107	ENSMLEG00000040978	PDCD11	100	85.790	Mandrillus_leucophaeus
ENSUAMG00000018015	PDCD11	99	43.834	ENSMAMG00000009572	pdcd11	99	43.985	Mastacembelus_armatus
ENSUAMG00000018015	PDCD11	95	61.478	ENSMZEG00005008949	pdcd11	99	44.355	Maylandia_zebra
ENSUAMG00000018015	PDCD11	99	55.932	ENSMGAG00000010482	PDCD11	99	55.532	Meleagris_gallopavo
ENSUAMG00000018015	PDCD11	100	78.836	ENSMAUG00000014924	Pdcd11	99	78.836	Mesocricetus_auratus
ENSUAMG00000018015	PDCD11	100	87.487	ENSMICG00000012421	PDCD11	99	87.167	Microcebus_murinus
ENSUAMG00000018015	PDCD11	100	79.936	ENSMOCG00000021792	Pdcd11	100	78.704	Microtus_ochrogaster
ENSUAMG00000018015	PDCD11	99	40.472	ENSMMOG00000007572	pdcd11	97	42.965	Mola_mola
ENSUAMG00000018015	PDCD11	99	64.009	ENSMODG00000011077	PDCD11	99	64.490	Monodelphis_domestica
ENSUAMG00000018015	PDCD11	99	58.112	ENSMALG00000003859	pdcd11	92	58.112	Monopterus_albus
ENSUAMG00000018015	PDCD11	100	78.420	MGP_CAROLIEiJ_G0023050	Pdcd11	99	78.473	Mus_caroli
ENSUAMG00000018015	PDCD11	100	78.454	ENSMUSG00000025047	Pdcd11	99	78.337	Mus_musculus
ENSUAMG00000018015	PDCD11	100	79.173	MGP_PahariEiJ_G0014540	Pdcd11	99	79.226	Mus_pahari
ENSUAMG00000018015	PDCD11	100	78.367	MGP_SPRETEiJ_G0023971	Pdcd11	99	78.314	Mus_spretus
ENSUAMG00000018015	PDCD11	100	94.027	ENSMPUG00000016829	PDCD11	100	94.027	Mustela_putorius_furo
ENSUAMG00000018015	PDCD11	100	90.027	ENSMLUG00000004997	PDCD11	99	90.027	Myotis_lucifugus
ENSUAMG00000018015	PDCD11	100	83.280	ENSNGAG00000018143	Pdcd11	99	83.120	Nannospalax_galili
ENSUAMG00000018015	PDCD11	85	57.227	ENSNBRG00000021596	pdcd11	99	56.022	Neolamprologus_brichardi
ENSUAMG00000018015	PDCD11	100	84.497	ENSNLEG00000026700	PDCD11	99	84.177	Nomascus_leucogenys
ENSUAMG00000018015	PDCD11	71	81.659	ENSMEUG00000013719	-	71	81.659	Notamacropus_eugenii
ENSUAMG00000018015	PDCD11	100	80.341	ENSOPRG00000010593	PDCD11	99	80.128	Ochotona_princeps
ENSUAMG00000018015	PDCD11	100	79.283	ENSODEG00000008079	PDCD11	99	79.230	Octodon_degus
ENSUAMG00000018015	PDCD11	95	60.950	ENSONIG00000018835	pdcd11	99	44.194	Oreochromis_niloticus
ENSUAMG00000018015	PDCD11	99	60.540	ENSOANG00000001636	-	99	60.275	Ornithorhynchus_anatinus
ENSUAMG00000018015	PDCD11	100	86.376	ENSOCUG00000006312	PDCD11	99	86.269	Oryctolagus_cuniculus
ENSUAMG00000018015	PDCD11	99	43.886	ENSORLG00020003642	pdcd11	99	43.807	Oryzias_latipes_hni
ENSUAMG00000018015	PDCD11	99	43.786	ENSORLG00015001618	pdcd11	99	43.717	Oryzias_latipes_hsok
ENSUAMG00000018015	PDCD11	75	44.365	ENSOMEG00000010904	pdcd11	98	44.814	Oryzias_melastigma
ENSUAMG00000018015	PDCD11	100	85.533	ENSOGAG00000008683	PDCD11	99	85.268	Otolemur_garnettii
ENSUAMG00000018015	PDCD11	99	86.141	ENSOARG00000003719	PDCD11	99	86.141	Ovis_aries
ENSUAMG00000018015	PDCD11	100	87.082	ENSPPAG00000024593	PDCD11	99	86.680	Pan_paniscus
ENSUAMG00000018015	PDCD11	100	93.387	ENSPPRG00000015133	PDCD11	99	93.333	Panthera_pardus
ENSUAMG00000018015	PDCD11	100	93.280	ENSPTIG00000011433	PDCD11	99	93.227	Panthera_tigris_altaica
ENSUAMG00000018015	PDCD11	100	87.800	ENSPTRG00000002911	PDCD11	99	87.480	Pan_troglodytes
ENSUAMG00000018015	PDCD11	100	88.439	ENSPANG00000020959	PDCD11	99	88.119	Papio_anubis
ENSUAMG00000018015	PDCD11	99	46.556	ENSPKIG00000000973	pdcd11	99	46.256	Paramormyrops_kingsleyae
ENSUAMG00000018015	PDCD11	77	58.264	ENSPSIG00000005102	PDCD11	93	58.799	Pelodiscus_sinensis
ENSUAMG00000018015	PDCD11	69	62.939	ENSPMGG00000007289	pdcd11	86	62.939	Periophthalmus_magnuspinnatus
ENSUAMG00000018015	PDCD11	100	80.085	ENSPEMG00000010315	Pdcd11	100	79.182	Peromyscus_maniculatus_bairdii
ENSUAMG00000018015	PDCD11	99	42.017	ENSPMAG00000003098	pdcd11	99	42.152	Petromyzon_marinus
ENSUAMG00000018015	PDCD11	99	68.276	ENSPCIG00000001118	PDCD11	96	77.916	Phascolarctos_cinereus
ENSUAMG00000018015	PDCD11	99	44.734	ENSPFOG00000006012	pdcd11	99	44.780	Poecilia_formosa
ENSUAMG00000018015	PDCD11	96	49.634	ENSPLAG00000014494	pdcd11	99	49.130	Poecilia_latipinna
ENSUAMG00000018015	PDCD11	91	54.786	ENSPMEG00000018177	pdcd11	98	53.955	Poecilia_mexicana
ENSUAMG00000018015	PDCD11	99	44.503	ENSPREG00000000475	pdcd11	99	44.557	Poecilia_reticulata
ENSUAMG00000018015	PDCD11	100	86.705	ENSPPYG00000002621	PDCD11	99	86.276	Pongo_abelii
ENSUAMG00000018015	PDCD11	70	88.327	ENSPCAG00000011663	PDCD11	71	88.327	Procavia_capensis
ENSUAMG00000018015	PDCD11	100	79.567	ENSPCOG00000023327	PDCD11	100	79.084	Propithecus_coquereli
ENSUAMG00000018015	PDCD11	100	89.013	ENSPVAG00000004176	PDCD11	99	88.853	Pteropus_vampyrus
ENSUAMG00000018015	PDCD11	95	61.478	ENSPNYG00000003979	pdcd11	99	44.355	Pundamilia_nyererei
ENSUAMG00000018015	PDCD11	95	46.321	ENSPNAG00000017225	pdcd11	99	46.132	Pygocentrus_nattereri
ENSUAMG00000018015	PDCD11	100	78.533	ENSRNOG00000020304	Pdcd11	99	78.427	Rattus_norvegicus
ENSUAMG00000018015	PDCD11	100	88.439	ENSRBIG00000011889	PDCD11	99	88.226	Rhinopithecus_bieti
ENSUAMG00000018015	PDCD11	100	88.386	ENSRROG00000030483	PDCD11	99	88.173	Rhinopithecus_roxellana
ENSUAMG00000018015	PDCD11	87	48.327	YMR229C	-	94	42.773	Saccharomyces_cerevisiae
ENSUAMG00000018015	PDCD11	99	85.714	ENSSBOG00000030308	PDCD11	99	85.714	Saimiri_boliviensis_boliviensis
ENSUAMG00000018015	PDCD11	99	67.128	ENSSHAG00000018258	PDCD11	99	67.058	Sarcophilus_harrisii
ENSUAMG00000018015	PDCD11	99	46.692	ENSSFOG00015003881	pdcd11	99	46.531	Scleropages_formosus
ENSUAMG00000018015	PDCD11	99	44.730	ENSSMAG00000006612	pdcd11	99	44.640	Scophthalmus_maximus
ENSUAMG00000018015	PDCD11	97	48.806	ENSSDUG00000021302	pdcd11	99	48.580	Seriola_dumerili
ENSUAMG00000018015	PDCD11	50	44.022	ENSSLDG00000010228	pdcd11	99	43.804	Seriola_lalandi_dorsalis
ENSUAMG00000018015	PDCD11	77	89.286	ENSSARG00000002540	PDCD11	71	89.286	Sorex_araneus
ENSUAMG00000018015	PDCD11	97	43.114	ENSSPAG00000017558	pdcd11	100	43.225	Stegastes_partitus
ENSUAMG00000018015	PDCD11	100	87.787	ENSSSCG00000010599	PDCD11	100	87.855	Sus_scrofa
ENSUAMG00000018015	PDCD11	74	41.342	ENSTRUG00000014291	pdcd11	99	41.538	Takifugu_rubripes
ENSUAMG00000018015	PDCD11	99	43.971	ENSTNIG00000012085	pdcd11	99	43.797	Tetraodon_nigroviridis
ENSUAMG00000018015	PDCD11	100	81.813	ENSTBEG00000001893	PDCD11	94	90.625	Tupaia_belangeri
ENSUAMG00000018015	PDCD11	100	83.751	ENSTTRG00000003356	PDCD11	99	83.751	Tursiops_truncatus
ENSUAMG00000018015	PDCD11	99	97.548	ENSUMAG00000023567	PDCD11	99	97.548	Ursus_maritimus
ENSUAMG00000018015	PDCD11	75	87.786	ENSVPAG00000007405	PDCD11	83	87.786	Vicugna_pacos
ENSUAMG00000018015	PDCD11	100	93.867	ENSVVUG00000004457	PDCD11	100	93.600	Vulpes_vulpes
ENSUAMG00000018015	PDCD11	99	49.347	ENSXETG00000009482	pdcd11	99	49.348	Xenopus_tropicalis
ENSUAMG00000018015	PDCD11	96	42.829	ENSXCOG00000012420	pdcd11	99	39.622	Xiphophorus_couchianus
ENSUAMG00000018015	PDCD11	99	45.016	ENSXMAG00000004638	pdcd11	99	44.780	Xiphophorus_maculatus