EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000018254 (Gene tree)
Gene ID: -
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 12830 bases
Position: chrLZNR01000337.1:3062-15891
Accession: 18466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000023281	RNase_H	PF00075.24	6e-46	1	1
ENSUAMP00000023282	RNase_H	PF00075.24	6e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000026009	RNASEH1-201	934	-	ENSUAMP00000023281	193 (aa)	-	-
ENSUAMT00000026010	RNASEH1-202	1336	-	ENSUAMP00000023282	193 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000018254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000018254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000018254	RNASEH1	82	91.195	ENSG00000171865	RNASEH1	56	91.195	Homo_sapiens
ENSUAMG00000018254	RNASEH1	77	67.114	ENSAPOG00000000412	rnaseh1	50	67.114	Acanthochromis_polyacanthus
ENSUAMG00000018254	RNASEH1	80	97.403	ENSAMEG00000018433	RNASEH1	54	97.403	Ailuropoda_melanoleuca
ENSUAMG00000018254	RNASEH1	78	66.667	ENSACIG00000014666	rnaseh1	50	66.667	Amphilophus_citrinellus
ENSUAMG00000018254	RNASEH1	77	67.785	ENSAOCG00000015210	rnaseh1	50	67.785	Amphiprion_ocellaris
ENSUAMG00000018254	RNASEH1	77	68.456	ENSAPEG00000014104	rnaseh1	50	68.456	Amphiprion_percula
ENSUAMG00000018254	RNASEH1	77	66.443	ENSATEG00000000598	rnaseh1	53	66.443	Anabas_testudineus
ENSUAMG00000018254	RNASEH1	83	75.776	ENSAPLG00000001961	RNASEH1	63	75.776	Anas_platyrhynchos
ENSUAMG00000018254	RNASEH1	80	92.857	ENSANAG00000024055	RNASEH1	54	92.857	Aotus_nancymaae
ENSUAMG00000018254	RNASEH1	79	61.438	ENSAMXG00000042940	rnaseh1	54	61.438	Astyanax_mexicanus
ENSUAMG00000018254	RNASEH1	82	83.648	ENSBTAG00000016235	RNASEH1	57	83.648	Bos_taurus
ENSUAMG00000018254	RNASEH1	74	47.183	WBGene00004382	rnh-1.0	72	47.183	Caenorhabditis_elegans
ENSUAMG00000018254	RNASEH1	80	89.873	ENSCJAG00000035450	RNASEH1	54	89.873	Callithrix_jacchus
ENSUAMG00000018254	RNASEH1	80	96.104	ENSCAFG00000003259	RNASEH1	54	96.104	Canis_familiaris
ENSUAMG00000018254	RNASEH1	80	97.419	ENSCAFG00020004994	RNASEH1	100	97.419	Canis_lupus_dingo
ENSUAMG00000018254	RNASEH1	84	63.804	ENSCHIG00000022230	-	67	63.804	Capra_hircus
ENSUAMG00000018254	RNASEH1	84	82.716	ENSCHIG00000022264	-	57	82.716	Capra_hircus
ENSUAMG00000018254	RNASEH1	85	89.024	ENSTSYG00000012926	RNASEH1	56	89.024	Carlito_syrichta
ENSUAMG00000018254	RNASEH1	80	87.662	ENSCAPG00000004813	RNASEH1	64	87.662	Cavia_aperea
ENSUAMG00000018254	RNASEH1	80	87.662	ENSCPOG00000022278	Rnaseh1	52	87.662	Cavia_porcellus
ENSUAMG00000018254	RNASEH1	80	91.772	ENSCCAG00000038017	RNASEH1	55	91.772	Cebus_capucinus
ENSUAMG00000018254	RNASEH1	82	83.019	ENSCATG00000016818	-	58	83.019	Cercocebus_atys
ENSUAMG00000018254	RNASEH1	82	89.308	ENSCATG00000016515	-	56	89.308	Cercocebus_atys
ENSUAMG00000018254	RNASEH1	80	88.312	ENSCLAG00000002440	RNASEH1	54	88.312	Chinchilla_lanigera
ENSUAMG00000018254	RNASEH1	82	88.050	ENSCSAG00000006943	RNASEH1	56	88.050	Chlorocebus_sabaeus
ENSUAMG00000018254	RNASEH1	82	89.937	ENSCHOG00000008547	RNASEH1	78	89.937	Choloepus_hoffmanni
ENSUAMG00000018254	RNASEH1	82	77.215	ENSCPBG00000021620	RNASEH1	58	77.215	Chrysemys_picta_bellii
ENSUAMG00000018254	RNASEH1	82	49.367	ENSCING00000014054	-	54	49.367	Ciona_intestinalis
ENSUAMG00000018254	RNASEH1	82	89.937	ENSCANG00000037763	RNASEH1	56	89.937	Colobus_angolensis_palliatus
ENSUAMG00000018254	RNASEH1	82	85.535	ENSCGRG00001008950	Rnaseh1	56	85.535	Cricetulus_griseus_chok1gshd
ENSUAMG00000018254	RNASEH1	82	85.535	ENSCGRG00000006029	Rnaseh1	56	85.535	Cricetulus_griseus_crigri
ENSUAMG00000018254	RNASEH1	77	61.745	ENSCSEG00000005741	rnaseh1	52	61.745	Cynoglossus_semilaevis
ENSUAMG00000018254	RNASEH1	83	59.195	ENSDARG00000042571	rnaseh1	63	59.195	Danio_rerio
ENSUAMG00000018254	RNASEH1	83	90.000	ENSDNOG00000016056	RNASEH1	56	90.000	Dasypus_novemcinctus
ENSUAMG00000018254	RNASEH1	80	88.961	ENSDORG00000000704	Rnaseh1	54	88.961	Dipodomys_ordii
ENSUAMG00000018254	RNASEH1	80	46.497	FBgn0023171	rnh1	50	46.497	Drosophila_melanogaster
ENSUAMG00000018254	RNASEH1	83	82.500	ENSETEG00000012674	RNASEH1	56	82.500	Echinops_telfairi
ENSUAMG00000018254	RNASEH1	77	62.416	ENSEBUG00000008898	rnaseh1	50	62.416	Eptatretus_burgeri
ENSUAMG00000018254	RNASEH1	83	90.000	ENSEASG00005022200	RNASEH1	55	90.000	Equus_asinus_asinus
ENSUAMG00000018254	RNASEH1	80	92.857	ENSECAG00000020695	RNASEH1	53	92.857	Equus_caballus
ENSUAMG00000018254	RNASEH1	77	63.758	ENSELUG00000010112	rnaseh1	50	63.758	Esox_lucius
ENSUAMG00000018254	RNASEH1	83	91.875	ENSFCAG00000025832	RNASEH1	56	91.875	Felis_catus
ENSUAMG00000018254	RNASEH1	92	68.927	ENSFALG00000002069	RNASEH1	59	68.927	Ficedula_albicollis
ENSUAMG00000018254	RNASEH1	85	84.756	ENSFDAG00000002035	RNASEH1	51	84.756	Fukomys_damarensis
ENSUAMG00000018254	RNASEH1	78	64.901	ENSGMOG00000013818	rnaseh1	54	64.901	Gadus_morhua
ENSUAMG00000018254	RNASEH1	81	76.923	ENSGALG00000016389	RNASEH1	53	76.923	Gallus_gallus
ENSUAMG00000018254	RNASEH1	76	65.986	ENSGAFG00000001776	rnaseh1	50	65.986	Gambusia_affinis
ENSUAMG00000018254	RNASEH1	77	65.101	ENSGACG00000011935	rnaseh1	51	65.101	Gasterosteus_aculeatus
ENSUAMG00000018254	RNASEH1	80	93.506	ENSGGOG00000034822	RNASEH1	54	93.506	Gorilla_gorilla
ENSUAMG00000018254	RNASEH1	82	83.019	ENSHGLG00000002585	Rnaseh1	52	83.019	Heterocephalus_glaber_female
ENSUAMG00000018254	RNASEH1	82	83.019	ENSHGLG00100005105	Rnaseh1	52	83.019	Heterocephalus_glaber_male
ENSUAMG00000018254	RNASEH1	79	65.359	ENSHCOG00000012329	rnaseh1	50	65.359	Hippocampus_comes
ENSUAMG00000018254	RNASEH1	94	59.459	ENSIPUG00000023060	rnaseh1	71	59.459	Ictalurus_punctatus
ENSUAMG00000018254	RNASEH1	80	90.909	ENSSTOG00000012774	RNASEH1	57	88.125	Ictidomys_tridecemlineatus
ENSUAMG00000018254	RNASEH1	82	76.730	ENSJJAG00000021481	-	54	76.730	Jaculus_jaculus
ENSUAMG00000018254	RNASEH1	65	89.683	ENSJJAG00000020238	Rnaseh1	50	89.683	Jaculus_jaculus
ENSUAMG00000018254	RNASEH1	78	64.901	ENSKMAG00000001373	rnaseh1	52	64.901	Kryptolebias_marmoratus
ENSUAMG00000018254	RNASEH1	80	60.377	ENSLBEG00000004480	rnaseh1	58	60.377	Labrus_bergylta
ENSUAMG00000018254	RNASEH1	79	69.935	ENSLACG00000007100	RNASEH1	63	59.487	Latimeria_chalumnae
ENSUAMG00000018254	RNASEH1	92	62.360	ENSLOCG00000017212	rnaseh1	61	62.360	Lepisosteus_oculatus
ENSUAMG00000018254	RNASEH1	82	88.050	ENSLAFG00000015091	RNASEH1	55	88.050	Loxodonta_africana
ENSUAMG00000018254	RNASEH1	82	89.308	ENSMFAG00000000063	-	56	89.308	Macaca_fascicularis
ENSUAMG00000018254	RNASEH1	78	87.333	ENSMFAG00000002323	-	54	87.333	Macaca_fascicularis
ENSUAMG00000018254	RNASEH1	85	83.537	ENSMMUG00000019280	-	59	83.537	Macaca_mulatta
ENSUAMG00000018254	RNASEH1	82	88.679	ENSMNEG00000040183	-	56	88.679	Macaca_nemestrina
ENSUAMG00000018254	RNASEH1	78	88.667	ENSMNEG00000029676	-	54	88.667	Macaca_nemestrina
ENSUAMG00000018254	RNASEH1	90	83.333	ENSMLEG00000039352	-	71	83.333	Mandrillus_leucophaeus
ENSUAMG00000018254	RNASEH1	82	86.792	ENSMLEG00000028662	-	57	86.792	Mandrillus_leucophaeus
ENSUAMG00000018254	RNASEH1	78	69.536	ENSMAMG00000019725	rnaseh1	53	69.536	Mastacembelus_armatus
ENSUAMG00000018254	RNASEH1	81	76.923	ENSMGAG00000013979	RNASEH1	63	76.923	Meleagris_gallopavo
ENSUAMG00000018254	RNASEH1	82	85.443	ENSMAUG00000014957	Rnaseh1	55	85.443	Mesocricetus_auratus
ENSUAMG00000018254	RNASEH1	82	90.566	ENSMICG00000033156	RNASEH1	55	90.566	Microcebus_murinus
ENSUAMG00000018254	RNASEH1	80	85.065	ENSMOCG00000015522	Rnaseh1	53	85.065	Microtus_ochrogaster
ENSUAMG00000018254	RNASEH1	79	73.684	ENSMODG00000028814	-	62	73.684	Monodelphis_domestica
ENSUAMG00000018254	RNASEH1	80	82.468	ENSMODG00000014491	-	54	82.468	Monodelphis_domestica
ENSUAMG00000018254	RNASEH1	96	59.043	ENSMALG00000010565	rnaseh1	70	59.043	Monopterus_albus
ENSUAMG00000018254	RNASEH1	84	85.890	MGP_CAROLIEiJ_G0017660	Rnaseh1	57	85.890	Mus_caroli
ENSUAMG00000018254	RNASEH1	80	89.610	ENSMUSG00000020630	Rnaseh1	54	89.610	Mus_musculus
ENSUAMG00000018254	RNASEH1	83	85.802	MGP_PahariEiJ_G0029418	Rnaseh1	55	86.709	Mus_pahari
ENSUAMG00000018254	RNASEH1	84	86.503	MGP_SPRETEiJ_G0018502	Rnaseh1	57	86.503	Mus_spretus
ENSUAMG00000018254	RNASEH1	80	95.455	ENSMPUG00000012984	RNASEH1	75	95.455	Mustela_putorius_furo
ENSUAMG00000018254	RNASEH1	80	89.610	ENSNGAG00000015966	Rnaseh1	50	89.610	Nannospalax_galili
ENSUAMG00000018254	RNASEH1	96	37.838	ENSMEUG00000003610	-	64	37.838	Notamacropus_eugenii
ENSUAMG00000018254	RNASEH1	82	82.390	ENSOPRG00000005072	RNASEH1	55	82.390	Ochotona_princeps
ENSUAMG00000018254	RNASEH1	80	88.961	ENSODEG00000000235	Rnaseh1	53	88.961	Octodon_degus
ENSUAMG00000018254	RNASEH1	77	65.101	ENSONIG00000018697	rnaseh1	54	65.101	Oreochromis_niloticus
ENSUAMG00000018254	RNASEH1	82	88.679	ENSOCUG00000006117	RNASEH1	56	88.679	Oryctolagus_cuniculus
ENSUAMG00000018254	RNASEH1	77	65.772	ENSORLG00000018127	rnaseh1	54	65.772	Oryzias_latipes
ENSUAMG00000018254	RNASEH1	77	65.772	ENSORLG00020013660	rnaseh1	50	65.772	Oryzias_latipes_hni
ENSUAMG00000018254	RNASEH1	77	65.772	ENSORLG00015011338	rnaseh1	50	65.772	Oryzias_latipes_hsok
ENSUAMG00000018254	RNASEH1	85	87.273	ENSOGAG00000017176	RNASEH1	57	87.273	Otolemur_garnettii
ENSUAMG00000018254	RNASEH1	84	64.671	ENSOARG00000005386	RNASEH1	58	64.671	Ovis_aries
ENSUAMG00000018254	RNASEH1	82	91.195	ENSPPAG00000034221	RNASEH1	56	91.195	Pan_paniscus
ENSUAMG00000018254	RNASEH1	83	91.250	ENSPPRG00000015513	RNASEH1	56	91.250	Panthera_pardus
ENSUAMG00000018254	RNASEH1	83	91.250	ENSPTIG00000019034	RNASEH1	56	91.250	Panthera_tigris_altaica
ENSUAMG00000018254	RNASEH1	70	81.429	ENSPTRG00000043403	-	53	81.429	Pan_troglodytes
ENSUAMG00000018254	RNASEH1	82	91.195	ENSPTRG00000011614	RNASEH1	56	91.195	Pan_troglodytes
ENSUAMG00000018254	RNASEH1	82	77.358	ENSPANG00000018246	-	55	77.358	Papio_anubis
ENSUAMG00000018254	RNASEH1	82	88.679	ENSPANG00000000443	RNASEH1	65	88.679	Papio_anubis
ENSUAMG00000018254	RNASEH1	76	63.265	ENSPKIG00000003146	rnaseh1	57	63.265	Paramormyrops_kingsleyae
ENSUAMG00000018254	RNASEH1	87	71.856	ENSPSIG00000002937	RNASEH1	61	71.856	Pelodiscus_sinensis
ENSUAMG00000018254	RNASEH1	80	63.226	ENSPMGG00000017463	rnaseh1	59	63.226	Periophthalmus_magnuspinnatus
ENSUAMG00000018254	RNASEH1	85	83.537	ENSPEMG00000022465	-	57	83.537	Peromyscus_maniculatus_bairdii
ENSUAMG00000018254	RNASEH1	93	39.560	ENSPCIG00000026047	-	95	39.560	Phascolarctos_cinereus
ENSUAMG00000018254	RNASEH1	80	77.922	ENSPCIG00000023334	-	54	77.922	Phascolarctos_cinereus
ENSUAMG00000018254	RNASEH1	78	64.901	ENSPFOG00000002841	rnaseh1	51	65.772	Poecilia_formosa
ENSUAMG00000018254	RNASEH1	78	64.901	ENSPMEG00000016826	rnaseh1	51	64.901	Poecilia_mexicana
ENSUAMG00000018254	RNASEH1	78	64.901	ENSPREG00000012197	rnaseh1	50	64.901	Poecilia_reticulata
ENSUAMG00000018254	RNASEH1	69	83.582	ENSPPYG00000008067	-	51	83.582	Pongo_abelii
ENSUAMG00000018254	RNASEH1	76	90.411	ENSPCAG00000002500	RNASEH1	51	90.411	Procavia_capensis
ENSUAMG00000018254	RNASEH1	82	78.616	ENSPCOG00000019444	RNASEH1	53	78.616	Propithecus_coquereli
ENSUAMG00000018254	RNASEH1	79	83.660	ENSPVAG00000002070	RNASEH1	54	83.660	Pteropus_vampyrus
ENSUAMG00000018254	RNASEH1	79	68.627	ENSPNAG00000022344	rnaseh1	54	68.627	Pygocentrus_nattereri
ENSUAMG00000018254	RNASEH1	79	89.542	ENSRNOG00000008584	Rnaseh1	54	89.542	Rattus_norvegicus
ENSUAMG00000018254	RNASEH1	82	89.937	ENSRBIG00000034222	RNASEH1	55	89.937	Rhinopithecus_bieti
ENSUAMG00000018254	RNASEH1	82	89.937	ENSRROG00000041761	RNASEH1	55	89.937	Rhinopithecus_roxellana
ENSUAMG00000018254	RNASEH1	80	89.873	ENSSBOG00000025411	RNASEH1	55	89.873	Saimiri_boliviensis_boliviensis
ENSUAMG00000018254	RNASEH1	80	83.117	ENSSHAG00000013051	RNASEH1	53	83.117	Sarcophilus_harrisii
ENSUAMG00000018254	RNASEH1	82	62.500	ENSSFOG00015002709	rnaseh1	55	65.306	Scleropages_formosus
ENSUAMG00000018254	RNASEH1	77	67.114	ENSSMAG00000007586	rnaseh1	51	65.161	Scophthalmus_maximus
ENSUAMG00000018254	RNASEH1	77	67.785	ENSSDUG00000008217	rnaseh1	53	67.785	Seriola_dumerili
ENSUAMG00000018254	RNASEH1	77	67.785	ENSSLDG00000000442	rnaseh1	56	67.785	Seriola_lalandi_dorsalis
ENSUAMG00000018254	RNASEH1	83	70.186	ENSSPUG00000006644	RNASEH1	56	70.186	Sphenodon_punctatus
ENSUAMG00000018254	RNASEH1	84	83.951	ENSSSCG00000025305	RNASEH1	55	84.906	Sus_scrofa
ENSUAMG00000018254	RNASEH1	81	74.359	ENSTGUG00000012980	RNASEH1	52	74.359	Taeniopygia_guttata
ENSUAMG00000018254	RNASEH1	77	65.101	ENSTRUG00000015774	rnaseh1	53	65.101	Takifugu_rubripes
ENSUAMG00000018254	RNASEH1	79	67.974	ENSTNIG00000010715	rnaseh1	55	67.974	Tetraodon_nigroviridis
ENSUAMG00000018254	RNASEH1	83	76.875	ENSTTRG00000001615	RNASEH1	56	76.875	Tursiops_truncatus
ENSUAMG00000018254	RNASEH1	80	65.584	ENSVPAG00000011589	RNASEH1	54	65.584	Vicugna_pacos
ENSUAMG00000018254	RNASEH1	78	68.212	ENSXETG00000001212	rnaseh1	74	55.629	Xenopus_tropicalis
ENSUAMG00000018254	RNASEH1	78	54.967	ENSXETG00000030371	-	74	54.967	Xenopus_tropicalis
ENSUAMG00000018254	RNASEH1	78	62.914	ENSXMAG00000002357	rnaseh1	51	62.914	Xiphophorus_maculatus