EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000018262 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 118981 bases
Position: chrLZNR01000340.1:243877-362857
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000023292	PUF	PF00806.19	3.5e-55	1	6
ENSUAMP00000023292	PUF	PF00806.19	3.5e-55	2	6
ENSUAMP00000023292	PUF	PF00806.19	3.5e-55	3	6
ENSUAMP00000023292	PUF	PF00806.19	3.5e-55	4	6
ENSUAMP00000023292	PUF	PF00806.19	3.5e-55	5	6
ENSUAMP00000023292	PUF	PF00806.19	3.5e-55	6	6
ENSUAMP00000023293	PUF	PF00806.19	3.5e-55	1	6
ENSUAMP00000023293	PUF	PF00806.19	3.5e-55	2	6
ENSUAMP00000023293	PUF	PF00806.19	3.5e-55	3	6
ENSUAMP00000023293	PUF	PF00806.19	3.5e-55	4	6
ENSUAMP00000023293	PUF	PF00806.19	3.5e-55	5	6
ENSUAMP00000023293	PUF	PF00806.19	3.5e-55	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000026021	-	3385	-	ENSUAMP00000023293	1082 (aa)	-	-
ENSUAMT00000026020	-	3385	-	ENSUAMP00000023292	1082 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000018262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000018262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000018262	-	57	87.227	ENSUAMG00000008120	PUM2	95	80.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000018262	-	100	99.261	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSUAMG00000018262	-	89	91.262	ENSAPOG00000021632	pum1	98	90.615	Acanthochromis_polyacanthus
ENSUAMG00000018262	-	100	99.355	ENSAMEG00000017656	PUM1	96	99.355	Ailuropoda_melanoleuca
ENSUAMG00000018262	-	100	72.793	ENSACIG00000021013	pum1	99	74.819	Amphilophus_citrinellus
ENSUAMG00000018262	-	100	72.554	ENSAOCG00000003944	pum1	98	90.615	Amphiprion_ocellaris
ENSUAMG00000018262	-	100	72.554	ENSAPEG00000014550	pum1	98	90.615	Amphiprion_percula
ENSUAMG00000018262	-	100	72.645	ENSATEG00000016004	pum1	98	90.615	Anabas_testudineus
ENSUAMG00000018262	-	100	97.143	ENSAPLG00000009351	PUM1	99	97.143	Anas_platyrhynchos
ENSUAMG00000018262	-	100	95.203	ENSACAG00000000682	PUM1	97	95.111	Anolis_carolinensis
ENSUAMG00000018262	-	100	99.077	ENSANAG00000027865	PUM1	99	99.077	Aotus_nancymaae
ENSUAMG00000018262	-	89	74.667	ENSACLG00000019354	pum1	98	77.175	Astatotilapia_calliptera
ENSUAMG00000018262	-	100	77.106	ENSAMXG00000020607	pum1	95	77.564	Astyanax_mexicanus
ENSUAMG00000018262	-	100	99.261	ENSBTAG00000018979	PUM1	99	99.261	Bos_taurus
ENSUAMG00000018262	-	100	98.894	ENSCJAG00000006035	PUM1	99	99.026	Callithrix_jacchus
ENSUAMG00000018262	-	100	96.959	ENSCAFG00000011205	PUM1	99	96.959	Canis_familiaris
ENSUAMG00000018262	-	91	97.085	ENSCAFG00020024616	PUM1	98	98.632	Canis_lupus_dingo
ENSUAMG00000018262	-	100	99.261	ENSCHIG00000012952	PUM1	99	99.261	Capra_hircus
ENSUAMG00000018262	-	100	98.618	ENSTSYG00000008868	PUM1	99	98.618	Carlito_syrichta
ENSUAMG00000018262	-	100	98.433	ENSCPOG00000031613	PUM1	99	98.433	Cavia_porcellus
ENSUAMG00000018262	-	100	96.587	ENSCATG00000017991	PUM1	98	100.000	Cercocebus_atys
ENSUAMG00000018262	-	100	98.525	ENSCLAG00000007662	PUM1	99	98.525	Chinchilla_lanigera
ENSUAMG00000018262	-	100	97.993	ENSCSAG00000001028	PUM1	99	97.993	Chlorocebus_sabaeus
ENSUAMG00000018262	-	89	96.115	ENSCHOG00000010245	PUM1	80	96.115	Choloepus_hoffmanni
ENSUAMG00000018262	-	100	97.232	ENSCPBG00000009288	PUM1	99	97.727	Chrysemys_picta_bellii
ENSUAMG00000018262	-	100	99.077	ENSCANG00000042606	PUM1	99	99.026	Colobus_angolensis_palliatus
ENSUAMG00000018262	-	100	98.521	ENSCGRG00001024949	Pum1	99	98.521	Cricetulus_griseus_chok1gshd
ENSUAMG00000018262	-	100	98.521	ENSCGRG00000014197	Pum1	99	98.521	Cricetulus_griseus_crigri
ENSUAMG00000018262	-	89	74.435	ENSCSEG00000015981	pum1	98	76.308	Cynoglossus_semilaevis
ENSUAMG00000018262	-	100	72.011	ENSCVAG00000007043	pum1	99	74.051	Cyprinodon_variegatus
ENSUAMG00000018262	-	100	77.993	ENSDARG00000099256	pum1	100	78.269	Danio_rerio
ENSUAMG00000018262	-	100	98.525	ENSDNOG00000010939	PUM1	99	98.525	Dasypus_novemcinctus
ENSUAMG00000018262	-	83	98.377	ENSDORG00000001875	Pum1	98	98.377	Dipodomys_ordii
ENSUAMG00000018262	-	89	93.250	ENSETEG00000004355	PUM1	87	93.250	Echinops_telfairi
ENSUAMG00000018262	-	100	98.893	ENSEASG00005010813	PUM1	99	98.893	Equus_asinus_asinus
ENSUAMG00000018262	-	100	98.710	ENSECAG00000021369	PUM1	99	98.710	Equus_caballus
ENSUAMG00000018262	-	74	100.000	ENSEEUG00000003871	PUM1	73	100.000	Erinaceus_europaeus
ENSUAMG00000018262	-	100	74.797	ENSELUG00000002409	pum1	98	82.621	Esox_lucius
ENSUAMG00000018262	-	100	99.263	ENSFCAG00000010374	PUM1	99	100.000	Felis_catus
ENSUAMG00000018262	-	100	95.413	ENSFALG00000001214	PUM1	96	94.312	Ficedula_albicollis
ENSUAMG00000018262	-	100	98.433	ENSFDAG00000011319	PUM1	99	98.433	Fukomys_damarensis
ENSUAMG00000018262	-	100	97.327	ENSGALG00000042598	PUM1	99	97.327	Gallus_gallus
ENSUAMG00000018262	-	89	86.322	ENSGAFG00000015617	pum1	98	89.644	Gambusia_affinis
ENSUAMG00000018262	-	100	72.924	ENSGACG00000005717	pum1	99	74.595	Gasterosteus_aculeatus
ENSUAMG00000018262	-	100	96.866	ENSGAGG00000001290	PUM1	99	96.866	Gopherus_agassizii
ENSUAMG00000018262	-	100	99.077	ENSGGOG00000011983	PUM1	99	99.026	Gorilla_gorilla
ENSUAMG00000018262	-	100	72.373	ENSHBUG00000018718	pum1	99	74.503	Haplochromis_burtoni
ENSUAMG00000018262	-	100	98.249	ENSHGLG00000013819	Pum1	99	98.249	Heterocephalus_glaber_female
ENSUAMG00000018262	-	100	98.249	ENSHGLG00100008621	Pum1	99	98.249	Heterocephalus_glaber_male
ENSUAMG00000018262	-	100	75.683	ENSIPUG00000020421	pum1	99	76.615	Ictalurus_punctatus
ENSUAMG00000018262	-	100	98.985	ENSSTOG00000010757	PUM1	98	100.000	Ictidomys_tridecemlineatus
ENSUAMG00000018262	-	100	98.616	ENSJJAG00000000530	Pum1	98	100.000	Jaculus_jaculus
ENSUAMG00000018262	-	100	72.101	ENSKMAG00000003481	pum1	99	74.141	Kryptolebias_marmoratus
ENSUAMG00000018262	-	100	71.688	ENSLBEG00000002527	pum1	99	74.004	Labrus_bergylta
ENSUAMG00000018262	-	100	85.141	ENSLACG00000017188	PUM1	98	85.324	Latimeria_chalumnae
ENSUAMG00000018262	-	100	86.654	ENSLOCG00000005210	pum1	98	86.837	Lepisosteus_oculatus
ENSUAMG00000018262	-	100	98.157	ENSLAFG00000003178	PUM1	99	98.157	Loxodonta_africana
ENSUAMG00000018262	-	100	98.623	ENSMFAG00000010291	PUM1	98	100.000	Macaca_fascicularis
ENSUAMG00000018262	-	100	98.623	ENSMMUG00000013520	PUM1	99	99.026	Macaca_mulatta
ENSUAMG00000018262	-	100	99.077	ENSMNEG00000034639	PUM1	99	99.077	Macaca_nemestrina
ENSUAMG00000018262	-	100	99.077	ENSMLEG00000038743	PUM1	99	99.026	Mandrillus_leucophaeus
ENSUAMG00000018262	-	100	72.645	ENSMAMG00000011606	pum1	99	74.977	Mastacembelus_armatus
ENSUAMG00000018262	-	100	72.373	ENSMZEG00005005834	pum1	99	74.503	Maylandia_zebra
ENSUAMG00000018262	-	100	97.051	ENSMGAG00000000724	PUM1	99	97.051	Meleagris_gallopavo
ENSUAMG00000018262	-	100	98.341	ENSMAUG00000022090	Pum1	99	98.341	Mesocricetus_auratus
ENSUAMG00000018262	-	99	96.947	ENSMICG00000012213	-	97	96.947	Microcebus_murinus
ENSUAMG00000018262	-	100	98.894	ENSMICG00000007713	-	99	99.026	Microcebus_murinus
ENSUAMG00000018262	-	100	98.341	ENSMOCG00000015463	Pum1	99	98.341	Microtus_ochrogaster
ENSUAMG00000018262	-	89	87.234	ENSMMOG00000019817	pum1	98	90.615	Mola_mola
ENSUAMG00000018262	-	100	97.145	ENSMODG00000017067	PUM1	99	97.145	Monodelphis_domestica
ENSUAMG00000018262	-	89	49.594	ENSMALG00000016399	pum1	98	90.615	Monopterus_albus
ENSUAMG00000018262	-	100	98.244	MGP_CAROLIEiJ_G0026549	Pum1	99	98.244	Mus_caroli
ENSUAMG00000018262	-	100	98.521	ENSMUSG00000028580	Pum1	99	98.521	Mus_musculus
ENSUAMG00000018262	-	100	98.336	MGP_PahariEiJ_G0028881	Pum1	99	98.336	Mus_pahari
ENSUAMG00000018262	-	100	98.429	MGP_SPRETEiJ_G0027529	Pum1	99	98.429	Mus_spretus
ENSUAMG00000018262	-	100	99.170	ENSMPUG00000015454	PUM1	99	99.170	Mustela_putorius_furo
ENSUAMG00000018262	-	100	98.984	ENSMLUG00000006490	PUM1	99	98.984	Myotis_lucifugus
ENSUAMG00000018262	-	100	98.893	ENSNGAG00000002378	Pum1	99	98.893	Nannospalax_galili
ENSUAMG00000018262	-	78	79.772	ENSNBRG00000010689	pum1	98	82.244	Neolamprologus_brichardi
ENSUAMG00000018262	-	100	97.509	ENSNLEG00000001151	PUM1	98	99.306	Nomascus_leucogenys
ENSUAMG00000018262	-	74	100.000	ENSMEUG00000000976	-	74	97.297	Notamacropus_eugenii
ENSUAMG00000018262	-	82	99.004	ENSOPRG00000001776	PUM1	63	99.004	Ochotona_princeps
ENSUAMG00000018262	-	100	98.432	ENSODEG00000003465	PUM1	99	98.432	Octodon_degus
ENSUAMG00000018262	-	100	73.029	ENSONIG00000002290	pum1	99	74.864	Oreochromis_niloticus
ENSUAMG00000018262	-	83	76.477	ENSOANG00000004902	-	100	76.477	Ornithorhynchus_anatinus
ENSUAMG00000018262	-	100	98.707	ENSOCUG00000008641	PUM1	98	98.707	Oryctolagus_cuniculus
ENSUAMG00000018262	-	100	73.014	ENSORLG00000011482	pum1	99	74.324	Oryzias_latipes
ENSUAMG00000018262	-	100	73.105	ENSORLG00020019461	pum1	99	74.324	Oryzias_latipes_hni
ENSUAMG00000018262	-	100	73.105	ENSORLG00015011375	pum1	99	74.414	Oryzias_latipes_hsok
ENSUAMG00000018262	-	89	93.204	ENSOMEG00000009312	pum1	98	89.968	Oryzias_melastigma
ENSUAMG00000018262	-	100	96.472	ENSOGAG00000011063	PUM1	98	96.472	Otolemur_garnettii
ENSUAMG00000018262	-	100	97.972	ENSOARG00000001899	PUM1	99	99.026	Ovis_aries
ENSUAMG00000018262	-	100	99.077	ENSPPAG00000044003	PUM1	99	99.026	Pan_paniscus
ENSUAMG00000018262	-	100	99.354	ENSPPRG00000001370	PUM1	98	100.000	Panthera_pardus
ENSUAMG00000018262	-	100	99.170	ENSPTIG00000010798	PUM1	98	100.000	Panthera_tigris_altaica
ENSUAMG00000018262	-	100	99.077	ENSPTRG00000000453	PUM1	99	99.026	Pan_troglodytes
ENSUAMG00000018262	-	100	99.077	ENSPANG00000016338	PUM1	99	99.077	Papio_anubis
ENSUAMG00000018262	-	100	76.993	ENSPKIG00000010578	pum1	99	76.625	Paramormyrops_kingsleyae
ENSUAMG00000018262	-	100	97.509	ENSPSIG00000014118	PUM1	99	97.509	Pelodiscus_sinensis
ENSUAMG00000018262	-	78	77.746	ENSPMGG00000005836	pum1	98	80.337	Periophthalmus_magnuspinnatus
ENSUAMG00000018262	-	100	98.433	ENSPEMG00000010009	Pum1	99	98.433	Peromyscus_maniculatus_bairdii
ENSUAMG00000018262	-	100	97.238	ENSPCIG00000014151	PUM1	99	97.238	Phascolarctos_cinereus
ENSUAMG00000018262	-	94	75.530	ENSPFOG00000007289	pum1	97	80.000	Poecilia_formosa
ENSUAMG00000018262	-	100	71.378	ENSPLAG00000007256	pum1	98	76.190	Poecilia_latipinna
ENSUAMG00000018262	-	89	75.535	ENSPMEG00000019543	pum1	97	76.602	Poecilia_mexicana
ENSUAMG00000018262	-	100	72.464	ENSPREG00000005195	pum1	98	79.416	Poecilia_reticulata
ENSUAMG00000018262	-	100	96.931	ENSPPYG00000001621	PUM1	99	96.931	Pongo_abelii
ENSUAMG00000018262	-	75	99.174	ENSPCAG00000001979	PUM1	72	99.174	Procavia_capensis
ENSUAMG00000018262	-	100	98.894	ENSPCOG00000004398	PUM1	99	99.026	Propithecus_coquereli
ENSUAMG00000018262	-	100	98.893	ENSPVAG00000005207	PUM1	93	98.893	Pteropus_vampyrus
ENSUAMG00000018262	-	100	72.464	ENSPNYG00000009518	pum1	98	77.670	Pundamilia_nyererei
ENSUAMG00000018262	-	100	77.564	ENSPNAG00000026728	pum1	99	77.839	Pygocentrus_nattereri
ENSUAMG00000018262	-	100	98.706	ENSRNOG00000011709	Pum1	99	98.706	Rattus_norvegicus
ENSUAMG00000018262	-	100	99.077	ENSRBIG00000042521	PUM1	99	99.077	Rhinopithecus_bieti
ENSUAMG00000018262	-	100	99.261	ENSRROG00000020156	PUM1	99	99.261	Rhinopithecus_roxellana
ENSUAMG00000018262	-	100	98.986	ENSSBOG00000032037	PUM1	99	99.026	Saimiri_boliviensis_boliviensis
ENSUAMG00000018262	-	100	97.053	ENSSHAG00000010918	PUM1	99	97.053	Sarcophilus_harrisii
ENSUAMG00000018262	-	89	87.234	ENSSMAG00000010918	pum1	98	90.615	Scophthalmus_maximus
ENSUAMG00000018262	-	100	72.464	ENSSDUG00000009021	pum1	99	74.864	Seriola_dumerili
ENSUAMG00000018262	-	95	73.690	ENSSLDG00000009667	pum1	98	76.655	Seriola_lalandi_dorsalis
ENSUAMG00000018262	-	94	100.000	ENSSARG00000003055	PUM1	90	100.000	Sorex_araneus
ENSUAMG00000018262	-	100	96.679	ENSSPUG00000006267	PUM1	99	96.679	Sphenodon_punctatus
ENSUAMG00000018262	-	100	72.554	ENSSPAG00000016636	pum1	98	90.615	Stegastes_partitus
ENSUAMG00000018262	-	100	99.171	ENSSSCG00000003591	PUM1	99	100.000	Sus_scrofa
ENSUAMG00000018262	-	100	72.348	ENSTRUG00000013121	pum1	98	81.818	Takifugu_rubripes
ENSUAMG00000018262	-	100	72.884	ENSTNIG00000016983	pum1	98	75.023	Tetraodon_nigroviridis
ENSUAMG00000018262	-	88	94.526	ENSTBEG00000013810	PUM1	81	94.526	Tupaia_belangeri
ENSUAMG00000018262	-	91	98.891	ENSTTRG00000007436	PUM1	88	98.891	Tursiops_truncatus
ENSUAMG00000018262	-	95	98.387	ENSUMAG00000009211	PUM1	99	98.387	Ursus_maritimus
ENSUAMG00000018262	-	92	99.142	ENSVPAG00000005902	PUM1	91	99.142	Vicugna_pacos
ENSUAMG00000018262	-	100	99.447	ENSVVUG00000014631	PUM1	99	99.447	Vulpes_vulpes
ENSUAMG00000018262	-	100	86.293	ENSXETG00000012904	pum1	98	85.373	Xenopus_tropicalis
ENSUAMG00000018262	-	100	71.649	ENSXMAG00000002945	pum1	98	75.842	Xiphophorus_maculatus