EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000018606 (Gene tree)
Gene ID: -
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 91031 bases
Position: chrLZNR01008570.1:113968-204998
Accession: 11503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000026634	Exo_endo_phos	PF03372.23	3.5e-15	1	1
ENSUAMP00000026559	Exo_endo_phos	PF03372.23	3.6e-15	1	1
ENSUAMP00000026499	Exo_endo_phos	PF03372.23	6.4e-15	1	1
ENSUAMP00000026434	Exo_endo_phos	PF03372.23	9.2e-15	1	1
ENSUAMP00000026432	Exo_endo_phos	PF03372.23	9.3e-15	1	1
ENSUAMP00000026379	Exo_endo_phos	PF03372.23	9.6e-15	1	1
ENSUAMP00000026312	Exo_endo_phos	PF03372.23	9.7e-15	1	1
ENSUAMP00000026499	DUF1866	PF08952.11	1.4e-59	1	1
ENSUAMP00000026434	DUF1866	PF08952.11	1.6e-59	1	1
ENSUAMP00000026432	DUF1866	PF08952.11	1.7e-59	1	1
ENSUAMP00000026379	DUF1866	PF08952.11	1.7e-59	1	1
ENSUAMP00000026312	DUF1866	PF08952.11	1.7e-59	1	1
ENSUAMP00000026634	DUF1866	PF08952.11	1e-42	1	1
ENSUAMP00000026559	DUF1866	PF08952.11	1.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000029356	SYNJ1-201	4710	-	ENSUAMP00000026312	1569 (aa)	-	-
ENSUAMT00000029556	SYNJ1-205	3639	-	ENSUAMP00000026499	1212 (aa)	-	-
ENSUAMT00000029623	SYNJ1-206	2874	-	ENSUAMP00000026559	957 (aa)	-	-
ENSUAMT00000029702	SYNJ1-207	2676	-	ENSUAMP00000026634	891 (aa)	-	-
ENSUAMT00000029484	SYNJ1-203	4578	-	ENSUAMP00000026432	1525 (aa)	-	-
ENSUAMT00000029430	SYNJ1-202	4647	-	ENSUAMP00000026379	1548 (aa)	-	-
ENSUAMT00000029486	SYNJ1-204	4515	-	ENSUAMP00000026434	1504 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000018606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000018606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000018606	SYNJ1	51	58.316	ENSUAMG00000026577	-	88	58.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000018606	SYNJ1	99	98.013	ENSG00000159082	SYNJ1	100	99.438	Homo_sapiens
ENSUAMG00000018606	SYNJ1	98	80.042	ENSAPOG00000002809	synj1	96	69.248	Acanthochromis_polyacanthus
ENSUAMG00000018606	SYNJ1	99	98.233	ENSAMEG00000015028	SYNJ1	100	96.584	Ailuropoda_melanoleuca
ENSUAMG00000018606	SYNJ1	98	77.297	ENSACIG00000008857	synj1	97	68.466	Amphilophus_citrinellus
ENSUAMG00000018606	SYNJ1	98	80.042	ENSAOCG00000009835	synj1	95	69.544	Amphiprion_ocellaris
ENSUAMG00000018606	SYNJ1	98	80.042	ENSAPEG00000021010	synj1	87	66.667	Amphiprion_percula
ENSUAMG00000018606	SYNJ1	98	79.303	ENSATEG00000002306	synj1	97	64.778	Anabas_testudineus
ENSUAMG00000018606	SYNJ1	99	90.570	ENSAPLG00000011832	SYNJ1	94	88.829	Anas_platyrhynchos
ENSUAMG00000018606	SYNJ1	99	88.773	ENSACAG00000003006	-	99	82.552	Anolis_carolinensis
ENSUAMG00000018606	SYNJ1	99	97.908	ENSANAG00000027325	SYNJ1	99	94.259	Aotus_nancymaae
ENSUAMG00000018606	SYNJ1	98	79.303	ENSACLG00000002255	synj1	96	70.878	Astatotilapia_calliptera
ENSUAMG00000018606	SYNJ1	98	80.570	ENSAMXG00000008208	synj1	95	63.956	Astyanax_mexicanus
ENSUAMG00000018606	SYNJ1	99	97.280	ENSBTAG00000003063	SYNJ1	100	91.440	Bos_taurus
ENSUAMG00000018606	SYNJ1	99	98.222	ENSCJAG00000009187	SYNJ1	99	94.259	Callithrix_jacchus
ENSUAMG00000018606	SYNJ1	99	98.431	ENSCAFG00000009041	SYNJ1	99	97.066	Canis_familiaris
ENSUAMG00000018606	SYNJ1	99	98.745	ENSCAFG00020025776	SYNJ1	100	96.787	Canis_lupus_dingo
ENSUAMG00000018606	SYNJ1	99	97.385	ENSCHIG00000005095	SYNJ1	100	91.961	Capra_hircus
ENSUAMG00000018606	SYNJ1	99	98.013	ENSTSYG00000014541	SYNJ1	100	93.329	Carlito_syrichta
ENSUAMG00000018606	SYNJ1	99	84.061	ENSCAPG00000014483	SYNJ1	99	78.293	Cavia_aperea
ENSUAMG00000018606	SYNJ1	99	96.967	ENSCPOG00000012182	SYNJ1	100	90.386	Cavia_porcellus
ENSUAMG00000018606	SYNJ1	99	98.013	ENSCCAG00000020825	SYNJ1	100	93.203	Cebus_capucinus
ENSUAMG00000018606	SYNJ1	99	98.326	ENSCATG00000033891	SYNJ1	99	96.029	Cercocebus_atys
ENSUAMG00000018606	SYNJ1	99	96.362	ENSCLAG00000009796	SYNJ1	100	98.413	Chinchilla_lanigera
ENSUAMG00000018606	SYNJ1	99	97.401	ENSCSAG00000009654	SYNJ1	99	93.103	Chlorocebus_sabaeus
ENSUAMG00000018606	SYNJ1	91	92.182	ENSCHOG00000012390	SYNJ1	81	92.182	Choloepus_hoffmanni
ENSUAMG00000018606	SYNJ1	99	92.155	ENSCPBG00000006402	SYNJ1	97	86.964	Chrysemys_picta_bellii
ENSUAMG00000018606	SYNJ1	99	98.326	ENSCANG00000031359	SYNJ1	100	93.525	Colobus_angolensis_palliatus
ENSUAMG00000018606	SYNJ1	99	95.816	ENSCGRG00001010861	Synj1	99	88.574	Cricetulus_griseus_chok1gshd
ENSUAMG00000018606	SYNJ1	99	94.906	ENSCGRG00000015749	Synj1	100	96.825	Cricetulus_griseus_crigri
ENSUAMG00000018606	SYNJ1	99	78.283	ENSCSEG00000019614	synj1	99	71.118	Cynoglossus_semilaevis
ENSUAMG00000018606	SYNJ1	99	76.234	ENSCVAG00000019250	synj1	96	67.868	Cyprinodon_variegatus
ENSUAMG00000018606	SYNJ1	99	79.772	ENSDARG00000025011	synj1	95	73.171	Danio_rerio
ENSUAMG00000018606	SYNJ1	99	91.520	ENSDNOG00000010732	SYNJ1	99	84.795	Dasypus_novemcinctus
ENSUAMG00000018606	SYNJ1	73	97.266	ENSDORG00000014735	-	100	98.124	Dipodomys_ordii
ENSUAMG00000018606	SYNJ1	85	95.822	ENSETEG00000018674	SYNJ1	79	95.726	Echinops_telfairi
ENSUAMG00000018606	SYNJ1	53	61.649	ENSEBUG00000016247	synj1	98	49.633	Eptatretus_burgeri
ENSUAMG00000018606	SYNJ1	99	98.222	ENSEASG00005006287	SYNJ1	98	96.436	Equus_asinus_asinus
ENSUAMG00000018606	SYNJ1	99	98.117	ENSECAG00000004829	SYNJ1	99	96.743	Equus_caballus
ENSUAMG00000018606	SYNJ1	88	97.500	ENSEEUG00000005150	SYNJ1	95	89.493	Erinaceus_europaeus
ENSUAMG00000018606	SYNJ1	98	79.048	ENSELUG00000009731	synj1	95	64.443	Esox_lucius
ENSUAMG00000018606	SYNJ1	99	98.640	ENSFCAG00000012498	SYNJ1	100	95.746	Felis_catus
ENSUAMG00000018606	SYNJ1	65	85.191	ENSFALG00000004680	SYNJ1	92	82.361	Ficedula_albicollis
ENSUAMG00000018606	SYNJ1	99	96.258	ENSFDAG00000016818	SYNJ1	100	98.413	Fukomys_damarensis
ENSUAMG00000018606	SYNJ1	99	78.535	ENSFHEG00000017689	synj1	90	76.710	Fundulus_heteroclitus
ENSUAMG00000018606	SYNJ1	98	73.712	ENSGMOG00000014852	synj1	77	72.816	Gadus_morhua
ENSUAMG00000018606	SYNJ1	99	91.632	ENSGALG00000034317	SYNJ1	100	80.362	Gallus_gallus
ENSUAMG00000018606	SYNJ1	98	79.197	ENSGAFG00000019466	synj1	89	66.140	Gambusia_affinis
ENSUAMG00000018606	SYNJ1	98	73.977	ENSGACG00000020575	synj1	94	67.427	Gasterosteus_aculeatus
ENSUAMG00000018606	SYNJ1	99	91.779	ENSGAGG00000022523	SYNJ1	100	83.095	Gopherus_agassizii
ENSUAMG00000018606	SYNJ1	99	98.117	ENSGGOG00000015945	SYNJ1	99	95.949	Gorilla_gorilla
ENSUAMG00000018606	SYNJ1	98	78.489	ENSHBUG00000007774	synj1	96	70.878	Haplochromis_burtoni
ENSUAMG00000018606	SYNJ1	99	96.050	ENSHGLG00000006420	SYNJ1	100	98.413	Heterocephalus_glaber_female
ENSUAMG00000018606	SYNJ1	99	96.050	ENSHGLG00100012591	SYNJ1	100	98.413	Heterocephalus_glaber_male
ENSUAMG00000018606	SYNJ1	98	76.076	ENSHCOG00000012774	synj1	97	65.964	Hippocampus_comes
ENSUAMG00000018606	SYNJ1	98	80.191	ENSIPUG00000010691	SYNJ1	98	64.054	Ictalurus_punctatus
ENSUAMG00000018606	SYNJ1	99	97.490	ENSSTOG00000015806	SYNJ1	99	92.414	Ictidomys_tridecemlineatus
ENSUAMG00000018606	SYNJ1	99	88.021	ENSJJAG00000020168	Synj1	100	82.700	Jaculus_jaculus
ENSUAMG00000018606	SYNJ1	99	78.772	ENSKMAG00000004221	synj1	87	77.844	Kryptolebias_marmoratus
ENSUAMG00000018606	SYNJ1	98	78.555	ENSLBEG00000015081	synj1	99	66.006	Labrus_bergylta
ENSUAMG00000018606	SYNJ1	99	84.695	ENSLACG00000005928	SYNJ1	98	68.908	Latimeria_chalumnae
ENSUAMG00000018606	SYNJ1	99	82.054	ENSLOCG00000009230	synj1	88	68.973	Lepisosteus_oculatus
ENSUAMG00000018606	SYNJ1	99	96.466	ENSLAFG00000011806	SYNJ1	99	87.840	Loxodonta_africana
ENSUAMG00000018606	SYNJ1	99	96.150	ENSMFAG00000018883	SYNJ1	99	93.150	Macaca_fascicularis
ENSUAMG00000018606	SYNJ1	99	97.609	ENSMMUG00000004624	SYNJ1	99	92.813	Macaca_mulatta
ENSUAMG00000018606	SYNJ1	99	98.326	ENSMNEG00000040077	SYNJ1	100	93.198	Macaca_nemestrina
ENSUAMG00000018606	SYNJ1	99	98.431	ENSMLEG00000037029	SYNJ1	100	93.525	Mandrillus_leucophaeus
ENSUAMG00000018606	SYNJ1	98	79.937	ENSMAMG00000013404	synj1	88	66.507	Mastacembelus_armatus
ENSUAMG00000018606	SYNJ1	98	79.303	ENSMZEG00005024358	synj1	96	71.130	Maylandia_zebra
ENSUAMG00000018606	SYNJ1	99	90.209	ENSMGAG00000014522	SYNJ1	94	87.601	Meleagris_gallopavo
ENSUAMG00000018606	SYNJ1	99	94.595	ENSMAUG00000009743	Synj1	100	96.537	Mesocricetus_auratus
ENSUAMG00000018606	SYNJ1	99	98.117	ENSMICG00000034953	SYNJ1	99	95.790	Microcebus_murinus
ENSUAMG00000018606	SYNJ1	98	78.848	ENSMMOG00000010203	synj1	97	70.056	Mola_mola
ENSUAMG00000018606	SYNJ1	99	87.097	ENSMODG00000021073	SYNJ1	92	84.755	Monodelphis_domestica
ENSUAMG00000018606	SYNJ1	99	78.980	ENSMALG00000014015	synj1	96	64.694	Monopterus_albus
ENSUAMG00000018606	SYNJ1	99	95.218	MGP_CAROLIEiJ_G0020951	Synj1	100	97.403	Mus_caroli
ENSUAMG00000018606	SYNJ1	99	95.322	ENSMUSG00000022973	Synj1	100	97.691	Mus_musculus
ENSUAMG00000018606	SYNJ1	99	95.426	MGP_PahariEiJ_G0016656	Synj1	100	97.691	Mus_pahari
ENSUAMG00000018606	SYNJ1	99	95.322	MGP_SPRETEiJ_G0021857	Synj1	100	97.691	Mus_spretus
ENSUAMG00000018606	SYNJ1	99	97.930	ENSMPUG00000001153	SYNJ1	100	93.536	Mustela_putorius_furo
ENSUAMG00000018606	SYNJ1	50	91.946	ENSMLUG00000005764	-	100	74.907	Myotis_lucifugus
ENSUAMG00000018606	SYNJ1	73	92.331	ENSMLUG00000026584	-	100	94.963	Myotis_lucifugus
ENSUAMG00000018606	SYNJ1	99	95.738	ENSNGAG00000000453	Synj1	100	97.547	Nannospalax_galili
ENSUAMG00000018606	SYNJ1	98	75.553	ENSNBRG00000011936	synj1	90	63.529	Neolamprologus_brichardi
ENSUAMG00000018606	SYNJ1	90	92.587	ENSNLEG00000003734	SYNJ1	100	92.587	Nomascus_leucogenys
ENSUAMG00000018606	SYNJ1	88	88.636	ENSMEUG00000004158	-	73	73.795	Notamacropus_eugenii
ENSUAMG00000018606	SYNJ1	93	93.902	ENSOPRG00000013602	SYNJ1	93	93.902	Ochotona_princeps
ENSUAMG00000018606	SYNJ1	73	96.978	ENSODEG00000002409	-	100	97.835	Octodon_degus
ENSUAMG00000018606	SYNJ1	98	78.909	ENSONIG00000004667	synj1	100	66.433	Oreochromis_niloticus
ENSUAMG00000018606	SYNJ1	99	89.989	ENSOANG00000006929	SYNJ1	91	90.065	Ornithorhynchus_anatinus
ENSUAMG00000018606	SYNJ1	99	96.674	ENSOCUG00000001420	SYNJ1	100	86.108	Oryctolagus_cuniculus
ENSUAMG00000018606	SYNJ1	98	78.669	ENSORLG00000004320	synj1	95	69.261	Oryzias_latipes
ENSUAMG00000018606	SYNJ1	98	76.285	ENSORLG00020011994	synj1	94	69.462	Oryzias_latipes_hni
ENSUAMG00000018606	SYNJ1	98	78.775	ENSORLG00015018077	synj1	93	70.316	Oryzias_latipes_hsok
ENSUAMG00000018606	SYNJ1	98	79.092	ENSOMEG00000014322	synj1	96	66.768	Oryzias_melastigma
ENSUAMG00000018606	SYNJ1	99	91.641	ENSOGAG00000006010	SYNJ1	100	86.137	Otolemur_garnettii
ENSUAMG00000018606	SYNJ1	99	96.377	ENSOARG00000013414	SYNJ1	98	88.721	Ovis_aries
ENSUAMG00000018606	SYNJ1	99	98.117	ENSPPAG00000026784	SYNJ1	100	93.787	Pan_paniscus
ENSUAMG00000018606	SYNJ1	99	98.745	ENSPPRG00000023469	SYNJ1	100	95.877	Panthera_pardus
ENSUAMG00000018606	SYNJ1	99	98.640	ENSPTIG00000007930	SYNJ1	100	95.877	Panthera_tigris_altaica
ENSUAMG00000018606	SYNJ1	99	98.117	ENSPTRG00000048135	-	99	96.346	Pan_troglodytes
ENSUAMG00000018606	SYNJ1	99	98.117	ENSPTRG00000023787	SYNJ1	99	96.346	Pan_troglodytes
ENSUAMG00000018606	SYNJ1	99	98.326	ENSPANG00000022531	SYNJ1	100	93.394	Papio_anubis
ENSUAMG00000018606	SYNJ1	98	80.847	ENSPKIG00000022603	synj1	89	78.309	Paramormyrops_kingsleyae
ENSUAMG00000018606	SYNJ1	98	79.620	ENSPMGG00000016831	synj1	89	68.507	Periophthalmus_magnuspinnatus
ENSUAMG00000018606	SYNJ1	99	94.802	ENSPEMG00000018767	Synj1	100	96.970	Peromyscus_maniculatus_bairdii
ENSUAMG00000018606	SYNJ1	99	62.978	ENSPMAG00000002887	synj1	81	59.016	Petromyzon_marinus
ENSUAMG00000018606	SYNJ1	99	92.984	ENSPCIG00000016372	SYNJ1	99	85.000	Phascolarctos_cinereus
ENSUAMG00000018606	SYNJ1	99	78.512	ENSPFOG00000016886	synj1	95	71.720	Poecilia_formosa
ENSUAMG00000018606	SYNJ1	99	78.980	ENSPLAG00000017559	synj1	96	69.847	Poecilia_latipinna
ENSUAMG00000018606	SYNJ1	99	78.668	ENSPMEG00000007643	synj1	89	66.324	Poecilia_mexicana
ENSUAMG00000018606	SYNJ1	99	78.980	ENSPREG00000012412	synj1	96	68.765	Poecilia_reticulata
ENSUAMG00000018606	SYNJ1	99	97.193	ENSPPYG00000011365	SYNJ1	98	91.636	Pongo_abelii
ENSUAMG00000018606	SYNJ1	89	94.286	ENSPCAG00000009906	SYNJ1	84	94.286	Procavia_capensis
ENSUAMG00000018606	SYNJ1	91	97.092	ENSPCOG00000024841	SYNJ1	99	89.865	Propithecus_coquereli
ENSUAMG00000018606	SYNJ1	99	90.748	ENSPVAG00000000892	SYNJ1	100	86.857	Pteropus_vampyrus
ENSUAMG00000018606	SYNJ1	98	79.659	ENSPNYG00000022989	synj1	97	68.458	Pundamilia_nyererei
ENSUAMG00000018606	SYNJ1	98	80.191	ENSPNAG00000021119	synj1	89	77.686	Pygocentrus_nattereri
ENSUAMG00000018606	SYNJ1	99	95.946	ENSRNOG00000002051	Synj1	94	95.014	Rattus_norvegicus
ENSUAMG00000018606	SYNJ1	99	98.222	ENSRBIG00000034477	SYNJ1	100	93.460	Rhinopithecus_bieti
ENSUAMG00000018606	SYNJ1	99	97.401	ENSRROG00000039256	SYNJ1	99	94.259	Rhinopithecus_roxellana
ENSUAMG00000018606	SYNJ1	99	98.222	ENSSBOG00000021001	SYNJ1	100	93.072	Saimiri_boliviensis_boliviensis
ENSUAMG00000018606	SYNJ1	99	92.573	ENSSHAG00000008538	SYNJ1	99	77.594	Sarcophilus_harrisii
ENSUAMG00000018606	SYNJ1	98	80.508	ENSSFOG00015006095	synj1	95	66.098	Scleropages_formosus
ENSUAMG00000018606	SYNJ1	98	79.303	ENSSMAG00000018066	synj1	94	70.817	Scophthalmus_maximus
ENSUAMG00000018606	SYNJ1	98	79.725	ENSSDUG00000013058	synj1	96	62.084	Seriola_dumerili
ENSUAMG00000018606	SYNJ1	98	79.409	ENSSLDG00000021406	synj1	96	71.629	Seriola_lalandi_dorsalis
ENSUAMG00000018606	SYNJ1	72	93.431	ENSSARG00000009490	SYNJ1	67	97.368	Sorex_araneus
ENSUAMG00000018606	SYNJ1	99	91.632	ENSSPUG00000012552	SYNJ1	100	79.429	Sphenodon_punctatus
ENSUAMG00000018606	SYNJ1	98	79.831	ENSSPAG00000017029	synj1	95	69.324	Stegastes_partitus
ENSUAMG00000018606	SYNJ1	95	78.326	ENSSPAG00000006812	SYNJ1	96	57.640	Stegastes_partitus
ENSUAMG00000018606	SYNJ1	99	97.803	ENSSSCG00000012035	SYNJ1	100	93.173	Sus_scrofa
ENSUAMG00000018606	SYNJ1	100	89.773	ENSTGUG00000013445	SYNJ1	94	87.489	Taeniopygia_guttata
ENSUAMG00000018606	SYNJ1	99	78.914	ENSTRUG00000006907	synj1	97	69.668	Takifugu_rubripes
ENSUAMG00000018606	SYNJ1	98	75.182	ENSTNIG00000009940	synj1	100	65.445	Tetraodon_nigroviridis
ENSUAMG00000018606	SYNJ1	94	96.868	ENSTBEG00000016298	SYNJ1	90	87.648	Tupaia_belangeri
ENSUAMG00000018606	SYNJ1	99	86.798	ENSTTRG00000002222	SYNJ1	100	82.783	Tursiops_truncatus
ENSUAMG00000018606	SYNJ1	100	100.000	ENSUMAG00000018419	SYNJ1	100	100.000	Ursus_maritimus
ENSUAMG00000018606	SYNJ1	90	100.000	ENSVPAG00000001241	SYNJ1	84	100.000	Vicugna_pacos
ENSUAMG00000018606	SYNJ1	99	98.849	ENSVVUG00000023125	SYNJ1	99	96.698	Vulpes_vulpes
ENSUAMG00000018606	SYNJ1	100	84.140	ENSXETG00000009899	synj1	92	83.638	Xenopus_tropicalis
ENSUAMG00000018606	SYNJ1	99	78.387	ENSXCOG00000011896	synj1	99	68.365	Xiphophorus_couchianus
ENSUAMG00000018606	SYNJ1	99	78.180	ENSXMAG00000017524	synj1	99	68.093	Xiphophorus_maculatus