EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000018608 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 5569 bases
Position: chrLZNR01007273.1:39068-44636
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000023775	RRM_1	PF00076.22	5.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000026549	-	426	-	ENSUAMP00000023775	141 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000018608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000018608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000018608	-	57	34.409	ENSUAMG00000025727	-	58	34.409
ENSUAMG00000018608	-	85	37.302	ENSUAMG00000019780	RBM38	51	35.938
ENSUAMG00000018608	-	73	44.444	ENSUAMG00000000700	MSI2	55	45.283

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000018608	-	50	84.507	ENSG00000135486	HNRNPA1	63	84.507	Homo_sapiens
ENSUAMG00000018608	-	55	66.667	ENSACIG00000020389	HNRNPA1P48	51	70.423	Amphilophus_citrinellus
ENSUAMG00000018608	-	50	76.623	ENSFCAG00000042512	-	60	76.623	Felis_catus
ENSUAMG00000018608	-	50	84.507	ENSMMUG00000029402	-	62	84.507	Macaca_mulatta
ENSUAMG00000018608	-	55	74.699	ENSMGAG00000007630	-	68	83.099	Meleagris_gallopavo
ENSUAMG00000018608	-	55	66.667	ENSNBRG00000011082	HNRNPA1P48	52	70.423	Neolamprologus_brichardi
ENSUAMG00000018608	-	50	84.507	ENSOCUG00000023674	-	53	84.507	Oryctolagus_cuniculus
ENSUAMG00000018608	-	50	81.690	ENSOCUG00000021006	-	50	81.690	Oryctolagus_cuniculus
ENSUAMG00000018608	-	55	69.880	ENSPLAG00000013254	hnrnpa1b	52	86.885	Poecilia_latipinna
ENSUAMG00000018608	-	50	86.885	ENSPNYG00000017019	hnrnpa1b	52	77.465	Pundamilia_nyererei
ENSUAMG00000018608	-	55	65.385	ENSXCOG00000019224	HNRNPA1P48	54	65.385	Xiphophorus_couchianus