EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000018832 (Gene tree)
Gene ID: -
Gene Symbol: PRDM10
Alias: KIAA1231|MGC131802|PFM7
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 57369 bases
Position: chrLZNR01014110.1:1464-58832
Accession: 13995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000024121	zf-C2H2	PF00096.26	8.6e-34	1	5
ENSUAMP00000024121	zf-C2H2	PF00096.26	8.6e-34	2	5
ENSUAMP00000024121	zf-C2H2	PF00096.26	8.6e-34	3	5
ENSUAMP00000024121	zf-C2H2	PF00096.26	8.6e-34	4	5
ENSUAMP00000024121	zf-C2H2	PF00096.26	8.6e-34	5	5
ENSUAMP00000024129	zf-C2H2	PF00096.26	1.2e-33	1	5
ENSUAMP00000024129	zf-C2H2	PF00096.26	1.2e-33	2	5
ENSUAMP00000024129	zf-C2H2	PF00096.26	1.2e-33	3	5
ENSUAMP00000024129	zf-C2H2	PF00096.26	1.2e-33	4	5
ENSUAMP00000024129	zf-C2H2	PF00096.26	1.2e-33	5	5
ENSUAMP00000024100	zf-C2H2	PF00096.26	1.4e-33	1	5
ENSUAMP00000024100	zf-C2H2	PF00096.26	1.4e-33	2	5
ENSUAMP00000024100	zf-C2H2	PF00096.26	1.4e-33	3	5
ENSUAMP00000024100	zf-C2H2	PF00096.26	1.4e-33	4	5
ENSUAMP00000024100	zf-C2H2	PF00096.26	1.4e-33	5	5
ENSUAMP00000024131	zf-C2H2	PF00096.26	1.5e-28	1	4
ENSUAMP00000024131	zf-C2H2	PF00096.26	1.5e-28	2	4
ENSUAMP00000024131	zf-C2H2	PF00096.26	1.5e-28	3	4
ENSUAMP00000024131	zf-C2H2	PF00096.26	1.5e-28	4	4
ENSUAMP00000024128	zf-C2H2	PF00096.26	3.6e-28	1	4
ENSUAMP00000024128	zf-C2H2	PF00096.26	3.6e-28	2	4
ENSUAMP00000024128	zf-C2H2	PF00096.26	3.6e-28	3	4
ENSUAMP00000024128	zf-C2H2	PF00096.26	3.6e-28	4	4
ENSUAMP00000024131	zf-met	PF12874.7	2.7e-09	1	2
ENSUAMP00000024131	zf-met	PF12874.7	2.7e-09	2	2
ENSUAMP00000024128	zf-met	PF12874.7	1.3e-06	1	2
ENSUAMP00000024128	zf-met	PF12874.7	1.3e-06	2	2
ENSUAMP00000024121	zf-met	PF12874.7	4.5e-06	1	2
ENSUAMP00000024121	zf-met	PF12874.7	4.5e-06	2	2
ENSUAMP00000024129	zf-met	PF12874.7	5.1e-06	1	2
ENSUAMP00000024129	zf-met	PF12874.7	5.1e-06	2	2
ENSUAMP00000024100	zf-met	PF12874.7	5.3e-06	1	2
ENSUAMP00000024100	zf-met	PF12874.7	5.3e-06	2	2
ENSUAMP00000024121	zf-C2H2_jaz	PF12171.8	4.7e-17	1	1
ENSUAMP00000024129	zf-C2H2_jaz	PF12171.8	6.6e-17	1	1
ENSUAMP00000024100	zf-C2H2_jaz	PF12171.8	7.3e-17	1	1
ENSUAMP00000024131	zf-C2H2_jaz	PF12171.8	2.3e-14	1	1
ENSUAMP00000024128	zf-C2H2_jaz	PF12171.8	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000026948	PRDM10-205	3147	-	ENSUAMP00000024131	1048 (aa)	-	-
ENSUAMT00000026938	PRDM10-202	3051	-	ENSUAMP00000024121	1016 (aa)	-	-
ENSUAMT00000026916	PRDM10-201	3192	-	ENSUAMP00000024100	1063 (aa)	-	-
ENSUAMT00000026946	PRDM10-204	3168	-	ENSUAMP00000024129	1055 (aa)	-	-
ENSUAMT00000026945	PRDM10-203	3318	-	ENSUAMP00000024128	1105 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000018832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000018832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000018832	PRDM10	56	33.858	ENSUAMG00000009994	PRDM5	68	36.879

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000018832	PRDM10	95	96.256	ENSG00000170325	PRDM10	91	96.256	Homo_sapiens
ENSUAMG00000018832	PRDM10	94	99.476	ENSAMEG00000002425	PRDM10	92	93.682	Ailuropoda_melanoleuca
ENSUAMG00000018832	PRDM10	94	87.945	ENSAPLG00000004858	PRDM10	91	85.084	Anas_platyrhynchos
ENSUAMG00000018832	PRDM10	92	96.053	ENSANAG00000022064	PRDM10	90	77.456	Aotus_nancymaae
ENSUAMG00000018832	PRDM10	94	94.759	ENSBTAG00000019001	PRDM10	91	93.160	Bos_taurus
ENSUAMG00000018832	PRDM10	94	95.188	ENSCJAG00000009235	PRDM10	91	92.790	Callithrix_jacchus
ENSUAMG00000018832	PRDM10	96	96.692	ENSCAFG00000010164	PRDM10	91	96.692	Canis_familiaris
ENSUAMG00000018832	PRDM10	96	97.718	ENSCAFG00020010152	PRDM10	91	98.715	Canis_lupus_dingo
ENSUAMG00000018832	PRDM10	96	94.444	ENSCHIG00000026530	PRDM10	91	94.444	Capra_hircus
ENSUAMG00000018832	PRDM10	94	96.552	ENSTSYG00000000544	PRDM10	91	94.107	Carlito_syrichta
ENSUAMG00000018832	PRDM10	96	86.200	ENSCAPG00000017296	PRDM10	90	91.379	Cavia_aperea
ENSUAMG00000018832	PRDM10	95	86.800	ENSCPOG00000000389	PRDM10	87	93.506	Cavia_porcellus
ENSUAMG00000018832	PRDM10	94	95.397	ENSCCAG00000024567	PRDM10	91	93.258	Cebus_capucinus
ENSUAMG00000018832	PRDM10	94	96.440	ENSCATG00000040031	PRDM10	91	93.814	Cercocebus_atys
ENSUAMG00000018832	PRDM10	96	91.604	ENSCLAG00000014605	PRDM10	90	97.436	Chinchilla_lanigera
ENSUAMG00000018832	PRDM10	94	96.440	ENSCSAG00000002202	PRDM10	91	94.189	Chlorocebus_sabaeus
ENSUAMG00000018832	PRDM10	94	88.365	ENSCPBG00000026880	PRDM10	90	82.188	Chrysemys_picta_bellii
ENSUAMG00000018832	PRDM10	94	95.711	ENSCANG00000032669	PRDM10	91	93.820	Colobus_angolensis_palliatus
ENSUAMG00000018832	PRDM10	92	96.104	ENSCGRG00001021647	Prdm10	92	89.662	Cricetulus_griseus_chok1gshd
ENSUAMG00000018832	PRDM10	92	96.104	ENSCGRG00000006562	Prdm10	92	89.662	Cricetulus_griseus_crigri
ENSUAMG00000018832	PRDM10	87	92.300	ENSDNOG00000001366	PRDM10	95	92.523	Dasypus_novemcinctus
ENSUAMG00000018832	PRDM10	96	93.951	ENSDORG00000014292	Prdm10	91	93.951	Dipodomys_ordii
ENSUAMG00000018832	PRDM10	94	97.379	ENSEASG00005022914	PRDM10	91	95.122	Equus_asinus_asinus
ENSUAMG00000018832	PRDM10	94	97.379	ENSECAG00000011499	PRDM10	90	96.973	Equus_caballus
ENSUAMG00000018832	PRDM10	97	95.431	ENSFCAG00000004111	PRDM10	88	95.690	Felis_catus
ENSUAMG00000018832	PRDM10	94	88.229	ENSFALG00000004873	PRDM10	91	80.939	Ficedula_albicollis
ENSUAMG00000018832	PRDM10	92	94.805	ENSFDAG00000017311	PRDM10	91	90.672	Fukomys_damarensis
ENSUAMG00000018832	PRDM10	94	87.736	ENSGALG00000033660	PRDM10	93	84.897	Gallus_gallus
ENSUAMG00000018832	PRDM10	94	66.764	ENSGACG00000012293	prdm10	90	65.433	Gasterosteus_aculeatus
ENSUAMG00000018832	PRDM10	94	87.120	ENSGAGG00000012523	PRDM10	89	83.660	Gopherus_agassizii
ENSUAMG00000018832	PRDM10	96	94.256	ENSGGOG00000015359	PRDM10	91	94.167	Gorilla_gorilla
ENSUAMG00000018832	PRDM10	96	90.918	ENSHGLG00000001106	PRDM10	91	90.918	Heterocephalus_glaber_female
ENSUAMG00000018832	PRDM10	96	91.179	ENSHGLG00100002350	PRDM10	91	91.086	Heterocephalus_glaber_male
ENSUAMG00000018832	PRDM10	94	95.607	ENSSTOG00000002015	PRDM10	91	93.727	Ictidomys_tridecemlineatus
ENSUAMG00000018832	PRDM10	86	92.947	ENSJJAG00000021493	Prdm10	90	92.363	Jaculus_jaculus
ENSUAMG00000018832	PRDM10	97	89.749	ENSLAFG00000031867	PRDM10	93	88.676	Loxodonta_africana
ENSUAMG00000018832	PRDM10	94	96.440	ENSMFAG00000031008	PRDM10	91	93.814	Macaca_fascicularis
ENSUAMG00000018832	PRDM10	94	96.440	ENSMMUG00000017555	PRDM10	91	93.814	Macaca_mulatta
ENSUAMG00000018832	PRDM10	94	96.440	ENSMNEG00000036493	PRDM10	91	93.814	Macaca_nemestrina
ENSUAMG00000018832	PRDM10	88	98.734	ENSMLEG00000042028	PRDM10	87	98.113	Mandrillus_leucophaeus
ENSUAMG00000018832	PRDM10	94	87.631	ENSMGAG00000001112	PRDM10	91	81.826	Meleagris_gallopavo
ENSUAMG00000018832	PRDM10	94	95.602	ENSMICG00000013888	PRDM10	91	93.533	Microcebus_murinus
ENSUAMG00000018832	PRDM10	96	92.157	ENSMOCG00000021853	Prdm10	91	92.929	Microtus_ochrogaster
ENSUAMG00000018832	PRDM10	76	90.968	ENSMODG00000004979	PRDM10	88	91.226	Monodelphis_domestica
ENSUAMG00000018832	PRDM10	95	94.083	ENSMUSG00000042496	Prdm10	91	94.083	Mus_musculus
ENSUAMG00000018832	PRDM10	92	96.104	MGP_SPRETEiJ_G0033061	-	91	91.635	Mus_spretus
ENSUAMG00000018832	PRDM10	94	99.371	ENSMPUG00000008711	PRDM10	91	97.092	Mustela_putorius_furo
ENSUAMG00000018832	PRDM10	94	94.885	ENSMLUG00000013051	PRDM10	91	92.617	Myotis_lucifugus
ENSUAMG00000018832	PRDM10	96	94.140	ENSNGAG00000000580	Prdm10	90	95.426	Nannospalax_galili
ENSUAMG00000018832	PRDM10	94	96.440	ENSNLEG00000007488	PRDM10	91	94.002	Nomascus_leucogenys
ENSUAMG00000018832	PRDM10	96	92.918	ENSODEG00000005309	PRDM10	91	92.918	Octodon_degus
ENSUAMG00000018832	PRDM10	95	82.752	ENSOANG00000000577	-	91	78.684	Ornithorhynchus_anatinus
ENSUAMG00000018832	PRDM10	94	95.283	ENSOCUG00000003736	PRDM10	91	92.683	Oryctolagus_cuniculus
ENSUAMG00000018832	PRDM10	94	94.265	ENSOGAG00000010723	PRDM10	91	92.063	Otolemur_garnettii
ENSUAMG00000018832	PRDM10	94	95.073	ENSOARG00000014507	PRDM10	91	92.871	Ovis_aries
ENSUAMG00000018832	PRDM10	96	94.068	ENSPPAG00000042881	PRDM10	91	93.979	Pan_paniscus
ENSUAMG00000018832	PRDM10	97	95.431	ENSPPRG00000007002	PRDM10	91	95.685	Panthera_pardus
ENSUAMG00000018832	PRDM10	97	95.330	ENSPTIG00000013331	PRDM10	91	95.591	Panthera_tigris_altaica
ENSUAMG00000018832	PRDM10	96	94.162	ENSPTRG00000004477	PRDM10	91	94.073	Pan_troglodytes
ENSUAMG00000018832	PRDM10	96	94.444	ENSPANG00000017470	PRDM10	91	94.444	Papio_anubis
ENSUAMG00000018832	PRDM10	96	92.034	ENSPEMG00000014985	Prdm10	91	92.034	Peromyscus_maniculatus_bairdii
ENSUAMG00000018832	PRDM10	94	96.238	ENSPPYG00000004061	PRDM10	91	93.826	Pongo_abelii
ENSUAMG00000018832	PRDM10	90	92.727	ENSPCAG00000014514	PRDM10	89	92.727	Procavia_capensis
ENSUAMG00000018832	PRDM10	96	86.939	ENSPCOG00000023406	PRDM10	93	76.103	Propithecus_coquereli
ENSUAMG00000018832	PRDM10	94	97.077	ENSPVAG00000012764	PRDM10	91	94.953	Pteropus_vampyrus
ENSUAMG00000018832	PRDM10	92	96.104	ENSRNOG00000007853	Prdm10	91	91.981	Rattus_norvegicus
ENSUAMG00000018832	PRDM10	94	95.716	ENSRBIG00000030924	PRDM10	91	93.545	Rhinopithecus_bieti
ENSUAMG00000018832	PRDM10	94	95.716	ENSRROG00000034334	PRDM10	91	93.545	Rhinopithecus_roxellana
ENSUAMG00000018832	PRDM10	94	95.193	ENSSBOG00000008773	PRDM10	91	92.797	Saimiri_boliviensis_boliviensis
ENSUAMG00000018832	PRDM10	94	90.596	ENSSHAG00000004503	PRDM10	94	85.960	Sarcophilus_harrisii
ENSUAMG00000018832	PRDM10	62	100.000	ENSSARG00000013953	-	59	100.000	Sorex_araneus
ENSUAMG00000018832	PRDM10	96	86.251	ENSSPUG00000001178	PRDM10	90	86.350	Sphenodon_punctatus
ENSUAMG00000018832	PRDM10	94	94.259	ENSSSCG00000015243	PRDM10	100	92.121	Sus_scrofa
ENSUAMG00000018832	PRDM10	94	87.892	ENSTGUG00000000530	PRDM10	91	83.910	Taeniopygia_guttata
ENSUAMG00000018832	PRDM10	87	97.464	ENSTBEG00000007221	PRDM10	86	92.699	Tupaia_belangeri
ENSUAMG00000018832	PRDM10	94	93.006	ENSTTRG00000009189	PRDM10	92	89.889	Tursiops_truncatus
ENSUAMG00000018832	PRDM10	96	99.801	ENSUMAG00000003167	PRDM10	91	100.000	Ursus_maritimus
ENSUAMG00000018832	PRDM10	94	98.952	ENSVVUG00000019878	PRDM10	91	96.341	Vulpes_vulpes
ENSUAMG00000018832	PRDM10	94	74.660	ENSXETG00000032173	PRDM10	91	69.286	Xenopus_tropicalis