EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000019481 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 4967 bases
Position: chrLZNR01001544.1:84872-89838
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000025009	zf-C2H2	PF00096.26	5.9e-52	1	8
ENSUAMP00000025009	zf-C2H2	PF00096.26	5.9e-52	2	8
ENSUAMP00000025009	zf-C2H2	PF00096.26	5.9e-52	3	8
ENSUAMP00000025009	zf-C2H2	PF00096.26	5.9e-52	4	8
ENSUAMP00000025009	zf-C2H2	PF00096.26	5.9e-52	5	8
ENSUAMP00000025009	zf-C2H2	PF00096.26	5.9e-52	6	8
ENSUAMP00000025009	zf-C2H2	PF00096.26	5.9e-52	7	8
ENSUAMP00000025009	zf-C2H2	PF00096.26	5.9e-52	8	8
ENSUAMP00000025009	zf-met	PF12874.7	7.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000027916	-	1476	-	ENSUAMP00000025009	491 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000019481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000019481's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000019481	-	53	50.667	ENSUAMG00000019652	-	91	50.667
ENSUAMG00000019481	-	68	100.000	ENSUAMG00000004882	-	99	100.000
ENSUAMG00000019481	-	50	40.000	ENSUAMG00000012111	ZFP64	71	40.299
ENSUAMG00000019481	-	57	57.080	ENSUAMG00000005918	-	88	57.080
ENSUAMG00000019481	-	56	53.982	ENSUAMG00000027384	-	87	53.540
ENSUAMG00000019481	-	59	44.643	ENSUAMG00000015472	ZNF236	61	44.643

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000019481	-	100	91.650	ENSFCAG00000021958	ZSCAN22	100	91.650	Felis_catus
ENSUAMG00000019481	-	99	71.138	ENSOPRG00000007399	ZSCAN22	100	71.138	Ochotona_princeps
ENSUAMG00000019481	-	100	78.049	ENSOCUG00000022361	ZSCAN22	90	78.049	Oryctolagus_cuniculus
ENSUAMG00000019481	-	100	90.835	ENSPPRG00000003132	ZSCAN22	100	90.835	Panthera_pardus
ENSUAMG00000019481	-	100	91.039	ENSPTIG00000019806	ZSCAN22	100	91.039	Panthera_tigris_altaica
ENSUAMG00000019481	-	100	99.796	ENSUMAG00000003953	ZSCAN22	100	99.796	Ursus_maritimus