EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000019589 (Gene tree)
Gene ID: -
Gene Symbol: TDRKH
Alias: TDRD2
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 6244 bases
Position: chrLZNR01002612.1:358588-364831
Accession: 11713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000025132	KH_1	PF00013.29	2.8e-34	1	2
ENSUAMP00000025132	KH_1	PF00013.29	2.8e-34	2	2
ENSUAMP00000025131	KH_1	PF00013.29	3e-34	1	2
ENSUAMP00000025131	KH_1	PF00013.29	3e-34	2	2
ENSUAMP00000025132	TUDOR	PF00567.24	1e-28	1	1
ENSUAMP00000025131	TUDOR	PF00567.24	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000028072	TDRKH-201	1746	-	ENSUAMP00000025131	581 (aa)	-	-
ENSUAMT00000028073	TDRKH-202	1689	-	ENSUAMP00000025132	562 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000019589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000019589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000019589	TDRKH	100	89.876	ENSG00000182134	TDRKH	100	100.000	Homo_sapiens
ENSUAMG00000019589	TDRKH	100	96.625	ENSAMEG00000000421	TDRKH	100	96.625	Ailuropoda_melanoleuca
ENSUAMG00000019589	TDRKH	85	57.055	ENSACAG00000007457	TDRKH	95	57.055	Anolis_carolinensis
ENSUAMG00000019589	TDRKH	100	89.343	ENSANAG00000021663	TDRKH	100	89.343	Aotus_nancymaae
ENSUAMG00000019589	TDRKH	100	90.764	ENSBTAG00000021594	TDRKH	100	90.764	Bos_taurus
ENSUAMG00000019589	TDRKH	100	88.988	ENSCJAG00000007955	TDRKH	100	88.988	Callithrix_jacchus
ENSUAMG00000019589	TDRKH	100	94.494	ENSCAFG00000012856	TDRKH	100	94.494	Canis_familiaris
ENSUAMG00000019589	TDRKH	100	94.494	ENSCAFG00020009606	TDRKH	100	94.494	Canis_lupus_dingo
ENSUAMG00000019589	TDRKH	100	89.876	ENSCHIG00000025326	TDRKH	100	89.876	Capra_hircus
ENSUAMG00000019589	TDRKH	100	87.744	ENSTSYG00000010405	TDRKH	100	87.744	Carlito_syrichta
ENSUAMG00000019589	TDRKH	92	86.240	ENSCAPG00000007565	TDRKH	97	86.240	Cavia_aperea
ENSUAMG00000019589	TDRKH	100	88.099	ENSCPOG00000003556	TDRKH	100	88.099	Cavia_porcellus
ENSUAMG00000019589	TDRKH	100	88.988	ENSCCAG00000033931	TDRKH	100	88.988	Cebus_capucinus
ENSUAMG00000019589	TDRKH	100	89.876	ENSCATG00000041878	TDRKH	100	89.876	Cercocebus_atys
ENSUAMG00000019589	TDRKH	100	86.679	ENSCLAG00000001088	TDRKH	100	86.679	Chinchilla_lanigera
ENSUAMG00000019589	TDRKH	100	90.053	ENSCSAG00000001820	TDRKH	100	90.053	Chlorocebus_sabaeus
ENSUAMG00000019589	TDRKH	100	74.028	ENSCHOG00000000264	TDRKH	100	74.028	Choloepus_hoffmanni
ENSUAMG00000019589	TDRKH	94	62.821	ENSCPBG00000008824	TDRKH	89	63.370	Chrysemys_picta_bellii
ENSUAMG00000019589	TDRKH	100	89.343	ENSCANG00000037367	TDRKH	100	89.343	Colobus_angolensis_palliatus
ENSUAMG00000019589	TDRKH	51	60.351	ENSCGRG00001010793	-	90	60.351	Cricetulus_griseus_chok1gshd
ENSUAMG00000019589	TDRKH	99	87.792	ENSCGRG00001006583	-	99	87.792	Cricetulus_griseus_chok1gshd
ENSUAMG00000019589	TDRKH	96	63.469	ENSCGRG00001011699	-	99	63.469	Cricetulus_griseus_chok1gshd
ENSUAMG00000019589	TDRKH	51	60.000	ENSCGRG00000012138	-	90	60.000	Cricetulus_griseus_crigri
ENSUAMG00000019589	TDRKH	96	63.284	ENSCGRG00000013230	-	99	63.284	Cricetulus_griseus_crigri
ENSUAMG00000019589	TDRKH	99	87.792	ENSCGRG00000012937	-	99	87.792	Cricetulus_griseus_crigri
ENSUAMG00000019589	TDRKH	90	90.039	ENSDNOG00000035650	TDRKH	99	90.039	Dasypus_novemcinctus
ENSUAMG00000019589	TDRKH	100	89.165	ENSDORG00000015322	Tdrkh	100	89.165	Dipodomys_ordii
ENSUAMG00000019589	TDRKH	100	81.095	ENSETEG00000008020	TDRKH	100	81.095	Echinops_telfairi
ENSUAMG00000019589	TDRKH	93	36.280	ENSEBUG00000010481	TDRKH	88	36.096	Eptatretus_burgeri
ENSUAMG00000019589	TDRKH	100	91.119	ENSEASG00005005213	TDRKH	100	91.119	Equus_asinus_asinus
ENSUAMG00000019589	TDRKH	100	91.474	ENSECAG00000013096	TDRKH	98	93.478	Equus_caballus
ENSUAMG00000019589	TDRKH	72	96.429	ENSEEUG00000015952	TDRKH	72	96.429	Erinaceus_europaeus
ENSUAMG00000019589	TDRKH	100	93.594	ENSFCAG00000010980	TDRKH	100	93.594	Felis_catus
ENSUAMG00000019589	TDRKH	100	86.679	ENSFDAG00000015315	TDRKH	100	86.679	Fukomys_damarensis
ENSUAMG00000019589	TDRKH	97	56.182	ENSGALG00000031812	TDRKH	97	56.115	Gallus_gallus
ENSUAMG00000019589	TDRKH	98	62.021	ENSGAGG00000005447	TDRKH	98	62.544	Gopherus_agassizii
ENSUAMG00000019589	TDRKH	100	90.231	ENSGGOG00000025419	TDRKH	100	90.231	Gorilla_gorilla
ENSUAMG00000019589	TDRKH	100	86.501	ENSHGLG00000007478	TDRKH	100	86.501	Heterocephalus_glaber_female
ENSUAMG00000019589	TDRKH	100	86.501	ENSHGLG00100007927	TDRKH	100	86.501	Heterocephalus_glaber_male
ENSUAMG00000019589	TDRKH	100	90.764	ENSSTOG00000006506	TDRKH	100	90.764	Ictidomys_tridecemlineatus
ENSUAMG00000019589	TDRKH	100	87.080	ENSJJAG00000000323	Tdrkh	100	87.080	Jaculus_jaculus
ENSUAMG00000019589	TDRKH	71	55.340	ENSLACG00000017639	TDRKH	98	55.340	Latimeria_chalumnae
ENSUAMG00000019589	TDRKH	99	86.195	ENSLAFG00000006274	TDRKH	100	86.195	Loxodonta_africana
ENSUAMG00000019589	TDRKH	100	90.053	ENSMFAG00000041641	TDRKH	100	90.053	Macaca_fascicularis
ENSUAMG00000019589	TDRKH	98	89.873	ENSMMUG00000009096	TDRKH	98	91.700	Macaca_mulatta
ENSUAMG00000019589	TDRKH	100	90.053	ENSMNEG00000021524	TDRKH	100	90.053	Macaca_nemestrina
ENSUAMG00000019589	TDRKH	100	90.053	ENSMLEG00000033882	TDRKH	100	90.053	Mandrillus_leucophaeus
ENSUAMG00000019589	TDRKH	99	86.453	ENSMAUG00000019159	Tdrkh	100	86.453	Mesocricetus_auratus
ENSUAMG00000019589	TDRKH	100	70.515	ENSMICG00000042330	-	100	70.515	Microcebus_murinus
ENSUAMG00000019589	TDRKH	100	90.053	ENSMICG00000010682	-	100	90.053	Microcebus_murinus
ENSUAMG00000019589	TDRKH	99	63.327	ENSMOCG00000014074	-	99	63.327	Microtus_ochrogaster
ENSUAMG00000019589	TDRKH	98	81.227	ENSMOCG00000002113	-	99	81.227	Microtus_ochrogaster
ENSUAMG00000019589	TDRKH	100	80.560	ENSMODG00000018906	TDRKH	96	80.560	Monodelphis_domestica
ENSUAMG00000019589	TDRKH	99	89.680	MGP_CAROLIEiJ_G0025310	Tdrkh	100	89.680	Mus_caroli
ENSUAMG00000019589	TDRKH	99	89.858	ENSMUSG00000041912	Tdrkh	100	89.858	Mus_musculus
ENSUAMG00000019589	TDRKH	99	89.324	MGP_PahariEiJ_G0026753	Tdrkh	100	89.324	Mus_pahari
ENSUAMG00000019589	TDRKH	99	89.680	MGP_SPRETEiJ_G0026252	Tdrkh	100	89.680	Mus_spretus
ENSUAMG00000019589	TDRKH	96	94.238	ENSMPUG00000003558	TDRKH	100	93.594	Mustela_putorius_furo
ENSUAMG00000019589	TDRKH	100	89.716	ENSMLUG00000002213	TDRKH	100	89.716	Myotis_lucifugus
ENSUAMG00000019589	TDRKH	99	89.324	ENSNGAG00000017825	Tdrkh	100	89.324	Nannospalax_galili
ENSUAMG00000019589	TDRKH	100	89.698	ENSNLEG00000010284	TDRKH	100	89.698	Nomascus_leucogenys
ENSUAMG00000019589	TDRKH	84	93.506	ENSMEUG00000006144	TDRKH	89	93.506	Notamacropus_eugenii
ENSUAMG00000019589	TDRKH	81	88.889	ENSOPRG00000016049	TDRKH	81	88.889	Ochotona_princeps
ENSUAMG00000019589	TDRKH	100	85.080	ENSODEG00000001075	-	100	85.080	Octodon_degus
ENSUAMG00000019589	TDRKH	100	86.856	ENSODEG00000009532	-	100	86.856	Octodon_degus
ENSUAMG00000019589	TDRKH	100	76.690	ENSOCUG00000001387	TDRKH	100	76.690	Oryctolagus_cuniculus
ENSUAMG00000019589	TDRKH	99	79.649	ENSOGAG00000001839	-	99	79.649	Otolemur_garnettii
ENSUAMG00000019589	TDRKH	99	73.132	ENSOGAG00000032601	-	99	73.132	Otolemur_garnettii
ENSUAMG00000019589	TDRKH	51	72.509	ENSOGAG00000030085	-	97	70.270	Otolemur_garnettii
ENSUAMG00000019589	TDRKH	100	90.053	ENSOARG00000021052	TDRKH	100	90.053	Ovis_aries
ENSUAMG00000019589	TDRKH	100	90.231	ENSPPAG00000028994	TDRKH	100	90.231	Pan_paniscus
ENSUAMG00000019589	TDRKH	100	94.306	ENSPPRG00000001585	TDRKH	100	94.306	Panthera_pardus
ENSUAMG00000019589	TDRKH	100	94.306	ENSPTIG00000019916	TDRKH	100	94.306	Panthera_tigris_altaica
ENSUAMG00000019589	TDRKH	100	90.231	ENSPTRG00000001297	TDRKH	100	90.231	Pan_troglodytes
ENSUAMG00000019589	TDRKH	100	90.053	ENSPANG00000001986	TDRKH	100	90.053	Papio_anubis
ENSUAMG00000019589	TDRKH	93	61.959	ENSPSIG00000008541	TDRKH	99	62.147	Pelodiscus_sinensis
ENSUAMG00000019589	TDRKH	99	89.858	ENSPEMG00000011171	Tdrkh	100	89.858	Peromyscus_maniculatus_bairdii
ENSUAMG00000019589	TDRKH	100	81.086	ENSPCIG00000021201	TDRKH	99	81.086	Phascolarctos_cinereus
ENSUAMG00000019589	TDRKH	100	90.231	ENSPPYG00000000855	TDRKH	100	90.231	Pongo_abelii
ENSUAMG00000019589	TDRKH	100	88.277	ENSPCOG00000027505	TDRKH	100	88.277	Propithecus_coquereli
ENSUAMG00000019589	TDRKH	100	88.099	ENSPVAG00000005234	TDRKH	100	88.099	Pteropus_vampyrus
ENSUAMG00000019589	TDRKH	99	90.569	ENSRNOG00000020860	Tdrkh	100	90.569	Rattus_norvegicus
ENSUAMG00000019589	TDRKH	100	89.698	ENSRBIG00000044860	TDRKH	100	89.698	Rhinopithecus_bieti
ENSUAMG00000019589	TDRKH	100	89.698	ENSRROG00000036923	TDRKH	100	89.698	Rhinopithecus_roxellana
ENSUAMG00000019589	TDRKH	100	71.581	ENSSBOG00000034454	TDRKH	93	79.792	Saimiri_boliviensis_boliviensis
ENSUAMG00000019589	TDRKH	100	81.786	ENSSHAG00000015859	TDRKH	88	81.786	Sarcophilus_harrisii
ENSUAMG00000019589	TDRKH	99	78.114	ENSSARG00000008525	TDRKH	100	78.114	Sorex_araneus
ENSUAMG00000019589	TDRKH	90	62.906	ENSSPUG00000002369	TDRKH	95	63.480	Sphenodon_punctatus
ENSUAMG00000019589	TDRKH	99	89.286	ENSSSCG00000027770	TDRKH	100	89.286	Sus_scrofa
ENSUAMG00000019589	TDRKH	100	88.632	ENSTBEG00000011201	TDRKH	100	88.632	Tupaia_belangeri
ENSUAMG00000019589	TDRKH	100	82.948	ENSTTRG00000003149	TDRKH	100	82.948	Tursiops_truncatus
ENSUAMG00000019589	TDRKH	100	99.484	ENSUMAG00000001456	TDRKH	100	99.484	Ursus_maritimus
ENSUAMG00000019589	TDRKH	100	91.297	ENSVPAG00000000666	TDRKH	100	91.297	Vicugna_pacos
ENSUAMG00000019589	TDRKH	100	94.840	ENSVVUG00000013241	TDRKH	100	94.840	Vulpes_vulpes
ENSUAMG00000019589	TDRKH	87	41.096	ENSXETG00000019909	tdrkh	87	40.900	Xenopus_tropicalis