EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000020030 (Gene tree)
Gene ID: -
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 6465 bases
Position: chrLZNR01003859.1:45145-51609
Accession: 18411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000025780	zf-C2H2	PF00096.26	4e-24	1	4
ENSUAMP00000025780	zf-C2H2	PF00096.26	4e-24	2	4
ENSUAMP00000025780	zf-C2H2	PF00096.26	4e-24	3	4
ENSUAMP00000025780	zf-C2H2	PF00096.26	4e-24	4	4
ENSUAMP00000025780	zf-met	PF12874.7	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000028768	SNAI3-201	876	-	ENSUAMP00000025780	291 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000020030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000020030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000020030	SNAI3	70	58.371	ENSUAMG00000014942	SNAI2	60	78.986
ENSUAMG00000020030	SNAI3	53	40.141	ENSUAMG00000012109	ZNF658	62	39.456
ENSUAMG00000020030	SNAI3	51	38.462	ENSUAMG00000010469	ZNF582	70	38.462
ENSUAMG00000020030	SNAI3	51	42.857	ENSUAMG00000014479	ZNF317	66	42.857
ENSUAMG00000020030	SNAI3	54	42.188	ENSUAMG00000000212	-	77	42.188
ENSUAMG00000020030	SNAI3	79	38.519	ENSUAMG00000005918	-	65	38.519
ENSUAMG00000020030	SNAI3	51	38.806	ENSUAMG00000017817	-	83	40.698
ENSUAMG00000020030	SNAI3	60	34.965	ENSUAMG00000028270	-	68	36.620
ENSUAMG00000020030	SNAI3	52	35.556	ENSUAMG00000009994	PRDM5	62	35.556
ENSUAMG00000020030	SNAI3	52	40.698	ENSUAMG00000027381	-	75	40.698
ENSUAMG00000020030	SNAI3	61	43.137	ENSUAMG00000010517	-	65	43.137
ENSUAMG00000020030	SNAI3	54	42.169	ENSUAMG00000017632	ZFP1	57	42.169
ENSUAMG00000020030	SNAI3	51	31.618	ENSUAMG00000024556	ZNF652	68	31.618
ENSUAMG00000020030	SNAI3	70	37.037	ENSUAMG00000027384	-	83	37.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000020030	SNAI3	100	77.055	ENSG00000185669	SNAI3	100	77.055	Homo_sapiens
ENSUAMG00000020030	SNAI3	99	48.013	ENSG00000019549	SNAI2	99	49.827	Homo_sapiens
ENSUAMG00000020030	SNAI3	99	48.525	ENSAMEG00000009606	SNAI2	99	50.172	Ailuropoda_melanoleuca
ENSUAMG00000020030	SNAI3	99	47.682	ENSANAG00000021163	SNAI2	99	50.173	Aotus_nancymaae
ENSUAMG00000020030	SNAI3	100	78.425	ENSANAG00000032748	SNAI3	100	78.425	Aotus_nancymaae
ENSUAMG00000020030	SNAI3	99	73.288	ENSBTAG00000017528	SNAI3	99	73.288	Bos_taurus
ENSUAMG00000020030	SNAI3	99	50.865	ENSBTAG00000013227	SNAI2	99	50.865	Bos_taurus
ENSUAMG00000020030	SNAI3	99	48.013	ENSCJAG00000013499	SNAI2	99	49.827	Callithrix_jacchus
ENSUAMG00000020030	SNAI3	99	48.525	ENSCAFG00000006638	SNAI2	99	49.827	Canis_familiaris
ENSUAMG00000020030	SNAI3	100	85.223	ENSCAFG00000029458	SNAI3	100	85.223	Canis_familiaris
ENSUAMG00000020030	SNAI3	99	48.525	ENSCAFG00020015384	SNAI2	99	49.827	Canis_lupus_dingo
ENSUAMG00000020030	SNAI3	100	85.567	ENSCAFG00020004719	SNAI3	100	85.567	Canis_lupus_dingo
ENSUAMG00000020030	SNAI3	99	51.211	ENSCHIG00000024410	SNAI2	99	51.211	Capra_hircus
ENSUAMG00000020030	SNAI3	99	73.630	ENSCHIG00000018087	SNAI3	99	73.630	Capra_hircus
ENSUAMG00000020030	SNAI3	91	75.188	ENSTSYG00000025594	SNAI3	91	75.472	Carlito_syrichta
ENSUAMG00000020030	SNAI3	70	58.371	ENSTSYG00000030892	SNAI2	51	78.986	Carlito_syrichta
ENSUAMG00000020030	SNAI3	68	58.962	ENSCAPG00000013078	SNAI2	79	64.773	Cavia_aperea
ENSUAMG00000020030	SNAI3	99	48.013	ENSCCAG00000024100	SNAI2	99	49.827	Cebus_capucinus
ENSUAMG00000020030	SNAI3	99	48.013	ENSCATG00000028656	SNAI2	99	49.827	Cercocebus_atys
ENSUAMG00000020030	SNAI3	100	78.425	ENSCATG00000031714	SNAI3	100	78.425	Cercocebus_atys
ENSUAMG00000020030	SNAI3	99	48.525	ENSCLAG00000011797	SNAI2	99	51.203	Chinchilla_lanigera
ENSUAMG00000020030	SNAI3	100	73.630	ENSCSAG00000003047	SNAI3	100	73.630	Chlorocebus_sabaeus
ENSUAMG00000020030	SNAI3	99	48.013	ENSCSAG00000014787	SNAI2	99	49.827	Chlorocebus_sabaeus
ENSUAMG00000020030	SNAI3	99	49.502	ENSCPBG00000020255	SNAI2	99	50.865	Chrysemys_picta_bellii
ENSUAMG00000020030	SNAI3	99	64.430	ENSCPBG00000023474	SNAI3	99	64.430	Chrysemys_picta_bellii
ENSUAMG00000020030	SNAI3	61	53.552	ENSCSAVG00000009819	-	84	56.442	Ciona_savignyi
ENSUAMG00000020030	SNAI3	99	48.013	ENSCANG00000029656	SNAI2	99	49.827	Colobus_angolensis_palliatus
ENSUAMG00000020030	SNAI3	93	77.491	ENSCANG00000031124	SNAI3	83	77.491	Colobus_angolensis_palliatus
ENSUAMG00000020030	SNAI3	100	68.151	ENSCGRG00001011389	Snai3	100	67.466	Cricetulus_griseus_chok1gshd
ENSUAMG00000020030	SNAI3	99	48.197	ENSCGRG00001013674	Snai2	99	48.973	Cricetulus_griseus_chok1gshd
ENSUAMG00000020030	SNAI3	100	68.151	ENSCGRG00000014932	Snai3	100	67.466	Cricetulus_griseus_crigri
ENSUAMG00000020030	SNAI3	99	48.197	ENSCGRG00000012119	Snai2	99	48.973	Cricetulus_griseus_crigri
ENSUAMG00000020030	SNAI3	80	52.361	ENSDNOG00000035204	-	100	53.814	Dasypus_novemcinctus
ENSUAMG00000020030	SNAI3	99	48.026	ENSDORG00000029620	Snai2	99	49.485	Dipodomys_ordii
ENSUAMG00000020030	SNAI3	91	78.113	ENSEASG00005000614	SNAI3	87	78.113	Equus_asinus_asinus
ENSUAMG00000020030	SNAI3	99	78.621	ENSECAG00000012131	SNAI3	99	78.621	Equus_caballus
ENSUAMG00000020030	SNAI3	100	67.010	ENSEEUG00000000841	SNAI3	100	67.010	Erinaceus_europaeus
ENSUAMG00000020030	SNAI3	99	50.512	ENSELUG00000018742	-	99	49.832	Esox_lucius
ENSUAMG00000020030	SNAI3	99	48.454	ENSELUG00000021795	SNAI2	78	49.485	Esox_lucius
ENSUAMG00000020030	SNAI3	100	75.258	ENSFCAG00000043885	SNAI3	100	75.258	Felis_catus
ENSUAMG00000020030	SNAI3	99	48.525	ENSFDAG00000016958	SNAI2	99	50.173	Fukomys_damarensis
ENSUAMG00000020030	SNAI3	99	49.502	ENSGAGG00000000426	SNAI2	99	50.865	Gopherus_agassizii
ENSUAMG00000020030	SNAI3	99	63.946	ENSGAGG00000023571	SNAI3	99	64.626	Gopherus_agassizii
ENSUAMG00000020030	SNAI3	100	77.397	ENSGGOG00000012559	SNAI3	100	77.397	Gorilla_gorilla
ENSUAMG00000020030	SNAI3	99	48.013	ENSGGOG00000000959	SNAI2	99	49.827	Gorilla_gorilla
ENSUAMG00000020030	SNAI3	99	49.310	ENSHCOG00000019435	SNAI2	99	49.310	Hippocampus_comes
ENSUAMG00000020030	SNAI3	99	46.865	ENSIPUG00000000131	snai2	99	48.110	Ictalurus_punctatus
ENSUAMG00000020030	SNAI3	99	48.525	ENSSTOG00000028743	SNAI2	99	50.515	Ictidomys_tridecemlineatus
ENSUAMG00000020030	SNAI3	100	72.260	ENSJJAG00000019934	Snai3	100	72.260	Jaculus_jaculus
ENSUAMG00000020030	SNAI3	99	48.333	ENSLOCG00000005992	SNAI2	99	50.000	Lepisosteus_oculatus
ENSUAMG00000020030	SNAI3	99	48.675	ENSLAFG00000009299	SNAI2	99	50.519	Loxodonta_africana
ENSUAMG00000020030	SNAI3	100	74.227	ENSLAFG00000005117	SNAI3	100	74.227	Loxodonta_africana
ENSUAMG00000020030	SNAI3	100	79.795	ENSMFAG00000032064	SNAI3	100	79.795	Macaca_fascicularis
ENSUAMG00000020030	SNAI3	99	48.013	ENSMFAG00000046061	SNAI2	99	49.827	Macaca_fascicularis
ENSUAMG00000020030	SNAI3	99	48.013	ENSMMUG00000016195	SNAI2	99	49.827	Macaca_mulatta
ENSUAMG00000020030	SNAI3	100	79.795	ENSMMUG00000008716	SNAI3	100	79.795	Macaca_mulatta
ENSUAMG00000020030	SNAI3	99	48.013	ENSMNEG00000034216	SNAI2	99	49.827	Macaca_nemestrina
ENSUAMG00000020030	SNAI3	100	79.795	ENSMNEG00000045515	SNAI3	100	79.795	Macaca_nemestrina
ENSUAMG00000020030	SNAI3	99	48.013	ENSMLEG00000034407	SNAI2	99	49.827	Mandrillus_leucophaeus
ENSUAMG00000020030	SNAI3	93	76.753	ENSMLEG00000033191	SNAI3	92	77.037	Mandrillus_leucophaeus
ENSUAMG00000020030	SNAI3	100	68.493	ENSMAUG00000001685	Snai3	100	66.781	Mesocricetus_auratus
ENSUAMG00000020030	SNAI3	99	48.197	ENSMAUG00000008119	Snai2	99	48.973	Mesocricetus_auratus
ENSUAMG00000020030	SNAI3	99	48.197	ENSMOCG00000006622	Snai2	99	50.519	Microtus_ochrogaster
ENSUAMG00000020030	SNAI3	100	70.205	ENSMOCG00000003536	Snai3	100	68.836	Microtus_ochrogaster
ENSUAMG00000020030	SNAI3	99	48.344	ENSMODG00000010173	SNAI2	99	51.379	Monodelphis_domestica
ENSUAMG00000020030	SNAI3	99	47.386	MGP_CAROLIEiJ_G0020483	Snai2	99	51.546	Mus_caroli
ENSUAMG00000020030	SNAI3	100	67.123	MGP_CAROLIEiJ_G0031662	Snai3	100	65.411	Mus_caroli
ENSUAMG00000020030	SNAI3	99	47.386	ENSMUSG00000022676	Snai2	99	50.519	Mus_musculus
ENSUAMG00000020030	SNAI3	100	68.493	ENSMUSG00000006587	Snai3	100	66.781	Mus_musculus
ENSUAMG00000020030	SNAI3	99	47.386	MGP_PahariEiJ_G0016188	Snai2	99	51.546	Mus_pahari
ENSUAMG00000020030	SNAI3	100	67.918	MGP_PahariEiJ_G0023260	Snai3	100	66.212	Mus_pahari
ENSUAMG00000020030	SNAI3	100	68.493	MGP_SPRETEiJ_G0032780	Snai3	100	66.781	Mus_spretus
ENSUAMG00000020030	SNAI3	99	47.386	MGP_SPRETEiJ_G0021379	Snai2	99	51.546	Mus_spretus
ENSUAMG00000020030	SNAI3	99	48.525	ENSMPUG00000010793	SNAI2	99	50.172	Mustela_putorius_furo
ENSUAMG00000020030	SNAI3	100	82.818	ENSMPUG00000008104	SNAI3	100	82.818	Mustela_putorius_furo
ENSUAMG00000020030	SNAI3	99	47.869	ENSMLUG00000001086	SNAI2	99	47.541	Myotis_lucifugus
ENSUAMG00000020030	SNAI3	100	71.233	ENSNGAG00000023039	Snai3	100	71.233	Nannospalax_galili
ENSUAMG00000020030	SNAI3	100	78.082	ENSNLEG00000000595	SNAI3	100	78.082	Nomascus_leucogenys
ENSUAMG00000020030	SNAI3	99	48.013	ENSNLEG00000013421	SNAI2	99	49.481	Nomascus_leucogenys
ENSUAMG00000020030	SNAI3	98	47.315	ENSMEUG00000009510	SNAI2	100	50.877	Notamacropus_eugenii
ENSUAMG00000020030	SNAI3	99	48.675	ENSOANG00000007267	SNAI2	99	48.344	Ornithorhynchus_anatinus
ENSUAMG00000020030	SNAI3	100	73.288	ENSOGAG00000000419	SNAI3	100	75.000	Otolemur_garnettii
ENSUAMG00000020030	SNAI3	99	51.211	ENSOARG00000013030	SNAI2	99	51.211	Ovis_aries
ENSUAMG00000020030	SNAI3	90	54.982	ENSOARG00000013069	-	99	54.982	Ovis_aries
ENSUAMG00000020030	SNAI3	99	48.013	ENSPPAG00000015662	SNAI2	99	49.827	Pan_paniscus
ENSUAMG00000020030	SNAI3	100	77.055	ENSPPAG00000043301	SNAI3	100	77.055	Pan_paniscus
ENSUAMG00000020030	SNAI3	99	75.261	ENSPPRG00000008511	SNAI3	99	75.261	Panthera_pardus
ENSUAMG00000020030	SNAI3	99	48.197	ENSPPRG00000012562	-	99	50.172	Panthera_pardus
ENSUAMG00000020030	SNAI3	100	77.055	ENSPTRG00000008460	SNAI3	100	77.055	Pan_troglodytes
ENSUAMG00000020030	SNAI3	99	48.013	ENSPTRG00000020235	SNAI2	99	49.827	Pan_troglodytes
ENSUAMG00000020030	SNAI3	100	79.110	ENSPANG00000000509	SNAI3	100	79.110	Papio_anubis
ENSUAMG00000020030	SNAI3	99	48.013	ENSPANG00000017540	SNAI2	99	49.827	Papio_anubis
ENSUAMG00000020030	SNAI3	99	49.511	ENSPKIG00000007872	SNAI3	99	49.511	Paramormyrops_kingsleyae
ENSUAMG00000020030	SNAI3	99	50.508	ENSPKIG00000002254	SNAI2	99	50.000	Paramormyrops_kingsleyae
ENSUAMG00000020030	SNAI3	99	49.502	ENSPSIG00000016395	SNAI2	99	50.865	Pelodiscus_sinensis
ENSUAMG00000020030	SNAI3	77	64.069	ENSPSIG00000004262	SNAI3	91	64.069	Pelodiscus_sinensis
ENSUAMG00000020030	SNAI3	99	48.197	ENSPEMG00000011739	Snai2	99	48.980	Peromyscus_maniculatus_bairdii
ENSUAMG00000020030	SNAI3	99	48.344	ENSPCIG00000025156	SNAI2	99	51.903	Phascolarctos_cinereus
ENSUAMG00000020030	SNAI3	99	48.013	ENSPPYG00000018578	SNAI2	99	49.827	Pongo_abelii
ENSUAMG00000020030	SNAI3	100	78.425	ENSPPYG00000007643	SNAI3	100	78.425	Pongo_abelii
ENSUAMG00000020030	SNAI3	99	48.525	ENSPCOG00000015656	SNAI2	99	50.515	Propithecus_coquereli
ENSUAMG00000020030	SNAI3	99	49.141	ENSPVAG00000009457	SNAI2	99	48.173	Pteropus_vampyrus
ENSUAMG00000020030	SNAI3	100	68.836	ENSRNOG00000013586	Snai3	100	67.123	Rattus_norvegicus
ENSUAMG00000020030	SNAI3	99	48.013	ENSRBIG00000041133	SNAI2	99	49.827	Rhinopithecus_bieti
ENSUAMG00000020030	SNAI3	100	79.110	ENSRBIG00000025770	SNAI3	100	79.110	Rhinopithecus_bieti
ENSUAMG00000020030	SNAI3	100	78.767	ENSRROG00000032757	SNAI3	100	78.767	Rhinopithecus_roxellana
ENSUAMG00000020030	SNAI3	99	48.013	ENSRROG00000032273	SNAI2	99	49.827	Rhinopithecus_roxellana
ENSUAMG00000020030	SNAI3	99	48.013	ENSSBOG00000035774	SNAI2	99	49.827	Saimiri_boliviensis_boliviensis
ENSUAMG00000020030	SNAI3	99	48.344	ENSSHAG00000004205	SNAI2	99	51.903	Sarcophilus_harrisii
ENSUAMG00000020030	SNAI3	99	46.395	ENSSFOG00015016115	snai3	93	45.283	Scleropages_formosus
ENSUAMG00000020030	SNAI3	99	49.828	ENSSFOG00015018025	SNAI2	99	51.020	Scleropages_formosus
ENSUAMG00000020030	SNAI3	99	48.837	ENSSPUG00000005427	-	99	48.505	Sphenodon_punctatus
ENSUAMG00000020030	SNAI3	99	49.338	ENSSSCG00000039568	SNAI2	99	51.203	Sus_scrofa
ENSUAMG00000020030	SNAI3	99	73.540	ENSTTRG00000006262	SNAI3	99	73.540	Tursiops_truncatus
ENSUAMG00000020030	SNAI3	70	58.371	ENSUMAG00000006525	SNAI2	67	65.341	Ursus_maritimus
ENSUAMG00000020030	SNAI3	100	85.911	ENSVVUG00000003233	SNAI3	100	85.911	Vulpes_vulpes
ENSUAMG00000020030	SNAI3	99	48.525	ENSVVUG00000017625	SNAI2	99	47.869	Vulpes_vulpes
ENSUAMG00000020030	SNAI3	99	48.837	ENSXETG00000024006	snai2	99	48.355	Xenopus_tropicalis