EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000020073 (Gene tree)
Gene ID: -
Gene Symbol: TTC21A
Alias: IFT139A|STI2
Full Name: tetratricopeptide repeat domain 21A
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 33616 bases
Position: chrLZNR01010666.1:82859-116474
Accession: 30761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000025852	PPR	PF01535.20	1.7e-06	1	1
ENSUAMP00000025863	PPR	PF01535.20	4.8e-06	1	1
ENSUAMP00000025851	PPR	PF01535.20	1.5e-05	1	1
ENSUAMP00000025855	PPR	PF01535.20	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000028844	TTC21A-202	3912	-	ENSUAMP00000025852	1303 (aa)	-	-
ENSUAMT00000028843	TTC21A-201	3795	-	ENSUAMP00000025851	1264 (aa)	-	-
ENSUAMT00000028857	TTC21A-204	3948	-	ENSUAMP00000025862	1315 (aa)	-	-
ENSUAMT00000028858	TTC21A-205	1737	-	ENSUAMP00000025863	578 (aa)	-	-
ENSUAMT00000028859	TTC21A-206	3450	-	ENSUAMP00000025864	1149 (aa)	-	-
ENSUAMT00000028848	TTC21A-203	3741	-	ENSUAMP00000025855	1246 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000020073's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000020073's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000020073	TTC21A	99	88.042	ENSBTAG00000010477	TTC21A	100	84.530	Bos_taurus
ENSUAMG00000020073	TTC21A	99	88.388	ENSCHIG00000018055	TTC21A	100	85.083	Capra_hircus
ENSUAMG00000020073	TTC21A	99	83.420	ENSCGRG00001020151	Ttc21a	100	77.412	Cricetulus_griseus_chok1gshd
ENSUAMG00000020073	TTC21A	99	83.420	ENSCGRG00000012945	Ttc21a	95	77.429	Cricetulus_griseus_crigri
ENSUAMG00000020073	TTC21A	99	73.657	ENSDORG00000027538	Ttc21a	99	66.514	Dipodomys_ordii
ENSUAMG00000020073	TTC21A	99	77.682	ENSETEG00000018753	TTC21A	86	77.056	Echinops_telfairi
ENSUAMG00000020073	TTC21A	99	83.074	ENSJJAG00000005140	Ttc21a	100	76.730	Jaculus_jaculus
ENSUAMG00000020073	TTC21A	99	84.256	ENSMUSG00000032514	Ttc21a	100	77.338	Mus_musculus
ENSUAMG00000020073	TTC21A	99	84.256	MGP_PahariEiJ_G0015676	Ttc21a	100	77.719	Mus_pahari
ENSUAMG00000020073	TTC21A	99	84.602	MGP_SPRETEiJ_G0033957	Ttc21a	100	77.567	Mus_spretus
ENSUAMG00000020073	TTC21A	99	89.601	ENSPPRG00000012924	TTC21A	100	81.569	Panthera_pardus
ENSUAMG00000020073	TTC21A	99	85.269	ENSPEMG00000010809	Ttc21a	99	78.675	Peromyscus_maniculatus_bairdii
ENSUAMG00000020073	TTC21A	99	84.948	ENSRNOG00000034089	Ttc21a	100	77.947	Rattus_norvegicus