EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000020249 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 18000 bases
Position: chrLZNR01004880.1:34877-52876
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000026069	zf-C3HC	PF07967.13	6.2e-37	1	1
ENSUAMP00000026069	Rsm1	PF08600.10	5.2e-16	1	2
ENSUAMP00000026069	Rsm1	PF08600.10	5.2e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000029092	ZC3HC1-201	1918	-	ENSUAMP00000026069	502 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000020249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000020249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000020249	ZC3HC1	99	91.816	ENSG00000091732	ZC3HC1	99	91.816	Homo_sapiens
ENSUAMG00000020249	ZC3HC1	95	45.051	ENSAPOG00000009078	zc3hc1	95	44.444	Acanthochromis_polyacanthus
ENSUAMG00000020249	ZC3HC1	100	97.817	ENSAMEG00000005425	ZC3HC1	100	97.817	Ailuropoda_melanoleuca
ENSUAMG00000020249	ZC3HC1	95	43.434	ENSACIG00000019513	zc3hc1	95	42.857	Amphilophus_citrinellus
ENSUAMG00000020249	ZC3HC1	95	45.253	ENSAOCG00000024310	zc3hc1	95	44.646	Amphiprion_ocellaris
ENSUAMG00000020249	ZC3HC1	95	45.253	ENSAPEG00000004907	zc3hc1	95	44.646	Amphiprion_percula
ENSUAMG00000020249	ZC3HC1	81	47.991	ENSATEG00000016898	zc3hc1	85	47.418	Anabas_testudineus
ENSUAMG00000020249	ZC3HC1	88	61.348	ENSAPLG00000003832	ZC3HC1	99	61.348	Anas_platyrhynchos
ENSUAMG00000020249	ZC3HC1	100	60.234	ENSACAG00000001638	ZC3HC1	100	60.234	Anolis_carolinensis
ENSUAMG00000020249	ZC3HC1	100	89.861	ENSANAG00000022213	ZC3HC1	100	89.861	Aotus_nancymaae
ENSUAMG00000020249	ZC3HC1	88	44.968	ENSACLG00000025033	zc3hc1	98	44.325	Astatotilapia_calliptera
ENSUAMG00000020249	ZC3HC1	94	43.478	ENSAMXG00000036792	zc3hc1	97	43.361	Astyanax_mexicanus
ENSUAMG00000020249	ZC3HC1	100	91.235	ENSBTAG00000011247	ZC3HC1	100	91.235	Bos_taurus
ENSUAMG00000020249	ZC3HC1	100	90.438	ENSCJAG00000010536	ZC3HC1	100	90.438	Callithrix_jacchus
ENSUAMG00000020249	ZC3HC1	100	94.024	ENSCAFG00000029401	-	99	94.024	Canis_familiaris
ENSUAMG00000020249	ZC3HC1	100	94.059	ENSCAFG00000001499	-	99	94.059	Canis_familiaris
ENSUAMG00000020249	ZC3HC1	100	94.422	ENSCAFG00000031850	-	100	94.422	Canis_familiaris
ENSUAMG00000020249	ZC3HC1	100	94.024	ENSCAFG00000028735	-	100	94.024	Canis_familiaris
ENSUAMG00000020249	ZC3HC1	100	93.056	ENSCAFG00020023333	-	100	93.056	Canis_lupus_dingo
ENSUAMG00000020249	ZC3HC1	100	94.223	ENSCAFG00020006829	-	100	94.223	Canis_lupus_dingo
ENSUAMG00000020249	ZC3HC1	100	84.861	ENSCHIG00000014103	ZC3HC1	100	84.861	Capra_hircus
ENSUAMG00000020249	ZC3HC1	100	89.044	ENSTSYG00000002843	ZC3HC1	100	89.044	Carlito_syrichta
ENSUAMG00000020249	ZC3HC1	90	63.576	ENSCAPG00000016300	ZC3HC1	100	63.436	Cavia_aperea
ENSUAMG00000020249	ZC3HC1	100	85.060	ENSCPOG00000014034	ZC3HC1	100	84.661	Cavia_porcellus
ENSUAMG00000020249	ZC3HC1	100	73.307	ENSCCAG00000020384	ZC3HC1	100	89.868	Cebus_capucinus
ENSUAMG00000020249	ZC3HC1	100	91.833	ENSCATG00000023130	ZC3HC1	100	91.833	Cercocebus_atys
ENSUAMG00000020249	ZC3HC1	100	62.550	ENSCLAG00000008260	ZC3HC1	100	61.355	Chinchilla_lanigera
ENSUAMG00000020249	ZC3HC1	73	91.803	ENSCSAG00000009881	ZC3HC1	97	91.803	Chlorocebus_sabaeus
ENSUAMG00000020249	ZC3HC1	90	90.244	ENSCHOG00000011846	ZC3HC1	99	90.244	Choloepus_hoffmanni
ENSUAMG00000020249	ZC3HC1	96	67.901	ENSCPBG00000017519	ZC3HC1	100	67.063	Chrysemys_picta_bellii
ENSUAMG00000020249	ZC3HC1	100	91.633	ENSCANG00000029091	ZC3HC1	100	91.633	Colobus_angolensis_palliatus
ENSUAMG00000020249	ZC3HC1	100	86.853	ENSCGRG00001018805	Zc3hc1	100	86.853	Cricetulus_griseus_chok1gshd
ENSUAMG00000020249	ZC3HC1	100	85.657	ENSCGRG00000017114	Zc3hc1	100	85.657	Cricetulus_griseus_crigri
ENSUAMG00000020249	ZC3HC1	96	43.452	ENSCSEG00000009284	zc3hc1	94	43.056	Cynoglossus_semilaevis
ENSUAMG00000020249	ZC3HC1	94	42.710	ENSCVAG00000011566	zc3hc1	94	42.094	Cyprinodon_variegatus
ENSUAMG00000020249	ZC3HC1	97	47.600	ENSDARG00000062651	zc3hc1	97	47.000	Danio_rerio
ENSUAMG00000020249	ZC3HC1	100	88.446	ENSDNOG00000045016	ZC3HC1	100	88.446	Dasypus_novemcinctus
ENSUAMG00000020249	ZC3HC1	100	79.681	ENSDORG00000008697	Zc3hc1	100	79.681	Dipodomys_ordii
ENSUAMG00000020249	ZC3HC1	90	92.035	ENSEASG00005008789	ZC3HC1	97	92.035	Equus_asinus_asinus
ENSUAMG00000020249	ZC3HC1	100	91.650	ENSECAG00000017886	ZC3HC1	100	91.650	Equus_caballus
ENSUAMG00000020249	ZC3HC1	84	83.333	ENSEEUG00000003123	ZC3HC1	84	83.333	Erinaceus_europaeus
ENSUAMG00000020249	ZC3HC1	94	43.992	ENSELUG00000023168	zc3hc1	94	45.030	Esox_lucius
ENSUAMG00000020249	ZC3HC1	100	93.426	ENSFCAG00000010429	ZC3HC1	100	93.426	Felis_catus
ENSUAMG00000020249	ZC3HC1	90	60.043	ENSFALG00000005006	ZC3HC1	100	60.043	Ficedula_albicollis
ENSUAMG00000020249	ZC3HC1	100	86.853	ENSFDAG00000019897	ZC3HC1	100	86.853	Fukomys_damarensis
ENSUAMG00000020249	ZC3HC1	96	42.857	ENSFHEG00000020149	zc3hc1	99	41.085	Fundulus_heteroclitus
ENSUAMG00000020249	ZC3HC1	94	42.116	ENSGMOG00000002914	zc3hc1	95	40.871	Gadus_morhua
ENSUAMG00000020249	ZC3HC1	99	61.554	ENSGALG00000008003	ZC3HC1	99	61.554	Gallus_gallus
ENSUAMG00000020249	ZC3HC1	96	43.750	ENSGAFG00000016095	zc3hc1	96	43.173	Gambusia_affinis
ENSUAMG00000020249	ZC3HC1	94	45.473	ENSGACG00000019706	zc3hc1	94	45.492	Gasterosteus_aculeatus
ENSUAMG00000020249	ZC3HC1	77	69.309	ENSGAGG00000016106	ZC3HC1	100	69.309	Gopherus_agassizii
ENSUAMG00000020249	ZC3HC1	99	91.816	ENSGGOG00000015504	ZC3HC1	99	91.816	Gorilla_gorilla
ENSUAMG00000020249	ZC3HC1	94	43.967	ENSHBUG00000008347	zc3hc1	94	43.354	Haplochromis_burtoni
ENSUAMG00000020249	ZC3HC1	100	88.645	ENSHGLG00000005085	ZC3HC1	100	88.645	Heterocephalus_glaber_female
ENSUAMG00000020249	ZC3HC1	100	88.446	ENSHGLG00100011395	ZC3HC1	100	88.446	Heterocephalus_glaber_male
ENSUAMG00000020249	ZC3HC1	95	43.182	ENSHCOG00000014309	zc3hc1	95	42.887	Hippocampus_comes
ENSUAMG00000020249	ZC3HC1	100	89.044	ENSSTOG00000023599	-	100	89.044	Ictidomys_tridecemlineatus
ENSUAMG00000020249	ZC3HC1	94	44.581	ENSKMAG00000015315	zc3hc1	88	43.558	Kryptolebias_marmoratus
ENSUAMG00000020249	ZC3HC1	95	44.177	ENSLBEG00000017325	zc3hc1	95	43.600	Labrus_bergylta
ENSUAMG00000020249	ZC3HC1	79	54.634	ENSLACG00000013032	ZC3HC1	97	53.717	Latimeria_chalumnae
ENSUAMG00000020249	ZC3HC1	99	52.071	ENSLOCG00000015963	zc3hc1	99	52.559	Lepisosteus_oculatus
ENSUAMG00000020249	ZC3HC1	100	87.945	ENSLAFG00000001292	ZC3HC1	100	87.945	Loxodonta_africana
ENSUAMG00000020249	ZC3HC1	100	92.032	ENSMFAG00000030176	ZC3HC1	100	92.032	Macaca_fascicularis
ENSUAMG00000020249	ZC3HC1	100	90.855	ENSMMUG00000006155	ZC3HC1	100	90.855	Macaca_mulatta
ENSUAMG00000020249	ZC3HC1	100	92.231	ENSMNEG00000011833	ZC3HC1	100	92.231	Macaca_nemestrina
ENSUAMG00000020249	ZC3HC1	100	92.032	ENSMLEG00000027328	ZC3HC1	100	92.032	Mandrillus_leucophaeus
ENSUAMG00000020249	ZC3HC1	95	44.355	ENSMAMG00000010691	zc3hc1	95	43.775	Mastacembelus_armatus
ENSUAMG00000020249	ZC3HC1	94	43.763	ENSMZEG00005007142	zc3hc1	94	43.149	Maylandia_zebra
ENSUAMG00000020249	ZC3HC1	99	60.433	ENSMGAG00000002977	ZC3HC1	99	61.024	Meleagris_gallopavo
ENSUAMG00000020249	ZC3HC1	82	81.446	ENSMAUG00000017032	Zc3hc1	92	81.446	Mesocricetus_auratus
ENSUAMG00000020249	ZC3HC1	100	89.841	ENSMICG00000009167	ZC3HC1	100	89.841	Microcebus_murinus
ENSUAMG00000020249	ZC3HC1	100	85.857	ENSMOCG00000015239	Zc3hc1	100	85.857	Microtus_ochrogaster
ENSUAMG00000020249	ZC3HC1	85	43.778	ENSMMOG00000002204	zc3hc1	98	43.111	Mola_mola
ENSUAMG00000020249	ZC3HC1	100	63.654	ENSMODG00000014630	ZC3HC1	100	63.654	Monodelphis_domestica
ENSUAMG00000020249	ZC3HC1	94	44.286	ENSMALG00000014447	zc3hc1	95	44.444	Monopterus_albus
ENSUAMG00000020249	ZC3HC1	100	85.857	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	85.857	Mus_caroli
ENSUAMG00000020249	ZC3HC1	100	85.657	ENSMUSG00000039130	Zc3hc1	100	85.657	Mus_musculus
ENSUAMG00000020249	ZC3HC1	100	79.283	MGP_PahariEiJ_G0021941	Zc3hc1	100	79.283	Mus_pahari
ENSUAMG00000020249	ZC3HC1	100	85.657	MGP_SPRETEiJ_G0029183	Zc3hc1	100	85.657	Mus_spretus
ENSUAMG00000020249	ZC3HC1	95	94.572	ENSMPUG00000005297	ZC3HC1	95	94.572	Mustela_putorius_furo
ENSUAMG00000020249	ZC3HC1	67	83.965	ENSMLUG00000029228	-	99	83.965	Myotis_lucifugus
ENSUAMG00000020249	ZC3HC1	100	89.703	ENSMLUG00000000063	-	100	89.703	Myotis_lucifugus
ENSUAMG00000020249	ZC3HC1	100	86.680	ENSNGAG00000019014	Zc3hc1	100	86.680	Nannospalax_galili
ENSUAMG00000020249	ZC3HC1	94	44.057	ENSNBRG00000004577	zc3hc1	94	43.443	Neolamprologus_brichardi
ENSUAMG00000020249	ZC3HC1	99	90.220	ENSNLEG00000012698	ZC3HC1	99	90.220	Nomascus_leucogenys
ENSUAMG00000020249	ZC3HC1	98	79.352	ENSMEUG00000011023	ZC3HC1	98	79.352	Notamacropus_eugenii
ENSUAMG00000020249	ZC3HC1	65	81.783	ENSOPRG00000007867	-	67	81.783	Ochotona_princeps
ENSUAMG00000020249	ZC3HC1	100	85.657	ENSODEG00000014604	ZC3HC1	100	85.458	Octodon_degus
ENSUAMG00000020249	ZC3HC1	94	44.376	ENSONIG00000011644	zc3hc1	94	43.763	Oreochromis_niloticus
ENSUAMG00000020249	ZC3HC1	90	69.181	ENSOANG00000011460	ZC3HC1	100	69.181	Ornithorhynchus_anatinus
ENSUAMG00000020249	ZC3HC1	100	85.743	ENSOCUG00000017137	ZC3HC1	100	85.743	Oryctolagus_cuniculus
ENSUAMG00000020249	ZC3HC1	95	43.725	ENSORLG00000014409	zc3hc1	94	43.725	Oryzias_latipes
ENSUAMG00000020249	ZC3HC1	95	43.522	ENSORLG00020015874	zc3hc1	94	43.522	Oryzias_latipes_hni
ENSUAMG00000020249	ZC3HC1	95	43.320	ENSORLG00015014641	zc3hc1	94	43.320	Oryzias_latipes_hsok
ENSUAMG00000020249	ZC3HC1	95	45.492	ENSOMEG00000020604	zc3hc1	95	45.436	Oryzias_melastigma
ENSUAMG00000020249	ZC3HC1	95	45.082	ENSOMEG00000000215	zc3hc1	95	45.030	Oryzias_melastigma
ENSUAMG00000020249	ZC3HC1	100	84.064	ENSOGAG00000026193	ZC3HC1	100	84.064	Otolemur_garnettii
ENSUAMG00000020249	ZC3HC1	100	91.485	ENSOARG00000004907	ZC3HC1	99	91.485	Ovis_aries
ENSUAMG00000020249	ZC3HC1	99	92.016	ENSPPAG00000043172	ZC3HC1	99	92.016	Pan_paniscus
ENSUAMG00000020249	ZC3HC1	100	92.829	ENSPPRG00000001004	ZC3HC1	100	92.829	Panthera_pardus
ENSUAMG00000020249	ZC3HC1	100	93.625	ENSPTIG00000007823	ZC3HC1	100	93.625	Panthera_tigris_altaica
ENSUAMG00000020249	ZC3HC1	99	91.816	ENSPTRG00000019685	ZC3HC1	99	91.816	Pan_troglodytes
ENSUAMG00000020249	ZC3HC1	100	90.656	ENSPANG00000014229	ZC3HC1	100	90.656	Papio_anubis
ENSUAMG00000020249	ZC3HC1	95	48.554	ENSPKIG00000007172	zc3hc1	95	48.554	Paramormyrops_kingsleyae
ENSUAMG00000020249	ZC3HC1	93	62.839	ENSPSIG00000016646	ZC3HC1	100	60.429	Pelodiscus_sinensis
ENSUAMG00000020249	ZC3HC1	94	41.532	ENSPMGG00000003548	zc3hc1	95	41.532	Periophthalmus_magnuspinnatus
ENSUAMG00000020249	ZC3HC1	100	86.255	ENSPEMG00000000514	Zc3hc1	100	86.255	Peromyscus_maniculatus_bairdii
ENSUAMG00000020249	ZC3HC1	99	75.250	ENSPCIG00000020619	ZC3HC1	100	79.434	Phascolarctos_cinereus
ENSUAMG00000020249	ZC3HC1	96	43.687	ENSPFOG00000003466	zc3hc1	96	43.313	Poecilia_formosa
ENSUAMG00000020249	ZC3HC1	96	43.145	ENSPLAG00000022211	zc3hc1	96	42.771	Poecilia_latipinna
ENSUAMG00000020249	ZC3HC1	96	43.548	ENSPMEG00000001458	zc3hc1	96	43.173	Poecilia_mexicana
ENSUAMG00000020249	ZC3HC1	96	43.750	ENSPREG00000004004	zc3hc1	96	43.173	Poecilia_reticulata
ENSUAMG00000020249	ZC3HC1	99	83.897	ENSPPYG00000017998	ZC3HC1	99	83.897	Pongo_abelii
ENSUAMG00000020249	ZC3HC1	92	85.435	ENSPCAG00000001182	ZC3HC1	100	85.435	Procavia_capensis
ENSUAMG00000020249	ZC3HC1	100	90.837	ENSPCOG00000017354	ZC3HC1	100	90.837	Propithecus_coquereli
ENSUAMG00000020249	ZC3HC1	100	85.259	ENSPVAG00000003195	ZC3HC1	100	85.060	Pteropus_vampyrus
ENSUAMG00000020249	ZC3HC1	94	43.763	ENSPNYG00000020692	zc3hc1	94	43.149	Pundamilia_nyererei
ENSUAMG00000020249	ZC3HC1	93	44.958	ENSPNAG00000020746	zc3hc1	95	44.748	Pygocentrus_nattereri
ENSUAMG00000020249	ZC3HC1	100	85.487	ENSRNOG00000010154	Zc3hc1	100	85.487	Rattus_norvegicus
ENSUAMG00000020249	ZC3HC1	90	91.611	ENSRBIG00000029409	ZC3HC1	100	91.611	Rhinopithecus_bieti
ENSUAMG00000020249	ZC3HC1	100	91.633	ENSRROG00000041831	ZC3HC1	100	91.633	Rhinopithecus_roxellana
ENSUAMG00000020249	ZC3HC1	88	89.706	ENSSBOG00000032787	ZC3HC1	100	89.706	Saimiri_boliviensis_boliviensis
ENSUAMG00000020249	ZC3HC1	92	79.140	ENSSHAG00000002529	ZC3HC1	100	79.140	Sarcophilus_harrisii
ENSUAMG00000020249	ZC3HC1	95	48.871	ENSSFOG00015003667	zc3hc1	91	47.658	Scleropages_formosus
ENSUAMG00000020249	ZC3HC1	95	44.153	ENSSMAG00000000647	zc3hc1	86	44.040	Scophthalmus_maximus
ENSUAMG00000020249	ZC3HC1	95	45.621	ENSSDUG00000004241	zc3hc1	93	44.828	Seriola_dumerili
ENSUAMG00000020249	ZC3HC1	95	45.621	ENSSLDG00000025056	zc3hc1	93	45.030	Seriola_lalandi_dorsalis
ENSUAMG00000020249	ZC3HC1	99	79.242	ENSSARG00000012013	ZC3HC1	99	79.242	Sorex_araneus
ENSUAMG00000020249	ZC3HC1	86	58.621	ENSSPUG00000000778	ZC3HC1	86	58.621	Sphenodon_punctatus
ENSUAMG00000020249	ZC3HC1	95	46.450	ENSSPAG00000020041	zc3hc1	95	45.859	Stegastes_partitus
ENSUAMG00000020249	ZC3HC1	100	91.036	ENSSSCG00000016565	ZC3HC1	100	91.036	Sus_scrofa
ENSUAMG00000020249	ZC3HC1	95	42.798	ENSTRUG00000020077	zc3hc1	95	42.181	Takifugu_rubripes
ENSUAMG00000020249	ZC3HC1	95	43.763	ENSTNIG00000007585	zc3hc1	99	43.852	Tetraodon_nigroviridis
ENSUAMG00000020249	ZC3HC1	99	79.641	ENSTBEG00000005216	ZC3HC1	99	79.641	Tupaia_belangeri
ENSUAMG00000020249	ZC3HC1	95	90.625	ENSTTRG00000008458	ZC3HC1	100	90.625	Tursiops_truncatus
ENSUAMG00000020249	ZC3HC1	100	99.203	ENSUMAG00000009268	ZC3HC1	100	99.203	Ursus_maritimus
ENSUAMG00000020249	ZC3HC1	77	93.878	ENSVPAG00000010846	ZC3HC1	77	93.878	Vicugna_pacos
ENSUAMG00000020249	ZC3HC1	96	93.958	ENSVVUG00000012386	ZC3HC1	99	93.958	Vulpes_vulpes
ENSUAMG00000020249	ZC3HC1	91	52.575	ENSXETG00000033900	zc3hc1	95	52.575	Xenopus_tropicalis
ENSUAMG00000020249	ZC3HC1	96	43.030	ENSXCOG00000013570	zc3hc1	96	42.455	Xiphophorus_couchianus
ENSUAMG00000020249	ZC3HC1	87	45.033	ENSXMAG00000010979	zc3hc1	95	44.396	Xiphophorus_maculatus