EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000020265 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chrLZNR01004883.1:144224-144595
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000026111	LSM	PF01423.22	3.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000029135	LSM10-201	372	-	ENSUAMP00000026111	123 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000020265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000020265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000020265	LSM10	100	89.431	ENSG00000181817	LSM10	100	89.431	Homo_sapiens
ENSUAMG00000020265	LSM10	100	98.374	ENSAMEG00000019854	LSM10	100	98.374	Ailuropoda_melanoleuca
ENSUAMG00000020265	LSM10	94	67.241	ENSACIG00000015420	oscp1a	77	67.241	Amphilophus_citrinellus
ENSUAMG00000020265	LSM10	96	69.492	ENSAOCG00000014654	-	98	69.492	Amphiprion_ocellaris
ENSUAMG00000020265	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSUAMG00000020265	LSM10	96	69.492	ENSAOCG00000015618	LSM10	98	69.492	Amphiprion_ocellaris
ENSUAMG00000020265	LSM10	96	69.492	ENSAPEG00000021845	-	98	69.492	Amphiprion_percula
ENSUAMG00000020265	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSUAMG00000020265	LSM10	94	62.931	ENSATEG00000006310	oscp1a	86	62.931	Anabas_testudineus
ENSUAMG00000020265	LSM10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSUAMG00000020265	LSM10	98	90.000	ENSANAG00000031489	-	98	90.000	Aotus_nancymaae
ENSUAMG00000020265	LSM10	100	90.244	ENSANAG00000018759	-	100	90.244	Aotus_nancymaae
ENSUAMG00000020265	LSM10	96	67.797	ENSACLG00000004728	oscp1a	96	67.797	Astatotilapia_calliptera
ENSUAMG00000020265	LSM10	96	67.797	ENSAMXG00000025301	oscp1a	98	67.797	Astyanax_mexicanus
ENSUAMG00000020265	LSM10	98	92.500	ENSBTAG00000024096	LSM10	98	92.500	Bos_taurus
ENSUAMG00000020265	LSM10	100	89.431	ENSCJAG00000044880	LSM10	100	89.431	Callithrix_jacchus
ENSUAMG00000020265	LSM10	100	97.561	ENSCAFG00000003382	LSM10	100	97.561	Canis_familiaris
ENSUAMG00000020265	LSM10	100	97.561	ENSCAFG00020008920	LSM10	100	97.561	Canis_lupus_dingo
ENSUAMG00000020265	LSM10	98	92.500	ENSCHIG00000009398	LSM10	98	92.500	Capra_hircus
ENSUAMG00000020265	LSM10	100	91.057	ENSCAPG00000012567	LSM10	100	91.057	Cavia_aperea
ENSUAMG00000020265	LSM10	100	91.057	ENSCPOG00000039302	LSM10	100	91.057	Cavia_porcellus
ENSUAMG00000020265	LSM10	100	90.244	ENSCCAG00000018913	-	100	90.244	Cebus_capucinus
ENSUAMG00000020265	LSM10	98	90.000	ENSCCAG00000008378	-	98	90.000	Cebus_capucinus
ENSUAMG00000020265	LSM10	100	90.244	ENSCATG00000006589	LSM10	100	90.244	Cercocebus_atys
ENSUAMG00000020265	LSM10	100	93.496	ENSCLAG00000008633	LSM10	100	93.496	Chinchilla_lanigera
ENSUAMG00000020265	LSM10	100	90.244	ENSCSAG00000000134	LSM10	100	90.244	Chlorocebus_sabaeus
ENSUAMG00000020265	LSM10	100	89.600	ENSCHOG00000008615	LSM10	100	89.600	Choloepus_hoffmanni
ENSUAMG00000020265	LSM10	83	30.392	ENSCSAVG00000001896	-	87	30.392	Ciona_savignyi
ENSUAMG00000020265	LSM10	100	90.244	ENSCANG00000019928	LSM10	100	90.244	Colobus_angolensis_palliatus
ENSUAMG00000020265	LSM10	98	92.562	ENSCGRG00001004317	-	99	92.562	Cricetulus_griseus_chok1gshd
ENSUAMG00000020265	LSM10	93	82.906	ENSCGRG00001022673	-	94	82.906	Cricetulus_griseus_chok1gshd
ENSUAMG00000020265	LSM10	93	82.906	ENSCGRG00000015514	-	94	82.906	Cricetulus_griseus_crigri
ENSUAMG00000020265	LSM10	98	92.562	ENSCGRG00000014935	-	99	92.562	Cricetulus_griseus_crigri
ENSUAMG00000020265	LSM10	96	65.254	ENSCSEG00000010374	oscp1a	79	65.254	Cynoglossus_semilaevis
ENSUAMG00000020265	LSM10	97	64.706	ENSCVAG00000001536	oscp1a	90	64.706	Cyprinodon_variegatus
ENSUAMG00000020265	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSUAMG00000020265	LSM10	98	72.727	ENSDARG00000101222	oscp1a	100	72.727	Danio_rerio
ENSUAMG00000020265	LSM10	99	94.262	ENSDNOG00000036662	LSM10	99	94.262	Dasypus_novemcinctus
ENSUAMG00000020265	LSM10	100	91.870	ENSDORG00000007579	Lsm10	100	91.870	Dipodomys_ordii
ENSUAMG00000020265	LSM10	100	90.244	ENSETEG00000005703	LSM10	100	90.244	Echinops_telfairi
ENSUAMG00000020265	LSM10	95	52.137	ENSEBUG00000001312	oscp1a	96	52.137	Eptatretus_burgeri
ENSUAMG00000020265	LSM10	100	97.561	ENSEASG00005012194	LSM10	100	97.561	Equus_asinus_asinus
ENSUAMG00000020265	LSM10	100	96.748	ENSECAG00000005071	LSM10	100	96.748	Equus_caballus
ENSUAMG00000020265	LSM10	100	91.870	ENSEEUG00000012032	LSM10	100	91.870	Erinaceus_europaeus
ENSUAMG00000020265	LSM10	98	69.421	ENSELUG00000007452	oscp1a	99	69.421	Esox_lucius
ENSUAMG00000020265	LSM10	100	70.732	ENSFALG00000000851	LSM10	100	70.732	Ficedula_albicollis
ENSUAMG00000020265	LSM10	100	91.870	ENSFDAG00000021056	LSM10	100	91.870	Fukomys_damarensis
ENSUAMG00000020265	LSM10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSUAMG00000020265	LSM10	92	63.158	ENSGMOG00000019832	oscp1a	96	63.158	Gadus_morhua
ENSUAMG00000020265	LSM10	100	74.797	ENSGALG00000002127	LSM10	100	74.797	Gallus_gallus
ENSUAMG00000020265	LSM10	91	61.739	ENSGAFG00000016445	oscp1a	93	61.739	Gambusia_affinis
ENSUAMG00000020265	LSM10	96	64.407	ENSGACG00000002329	oscp1a	97	64.407	Gasterosteus_aculeatus
ENSUAMG00000020265	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSUAMG00000020265	LSM10	100	91.057	ENSGGOG00000003556	LSM10	100	91.057	Gorilla_gorilla
ENSUAMG00000020265	LSM10	96	67.797	ENSHBUG00000001722	oscp1a	96	67.797	Haplochromis_burtoni
ENSUAMG00000020265	LSM10	100	91.870	ENSHGLG00000011625	LSM10	100	91.870	Heterocephalus_glaber_female
ENSUAMG00000020265	LSM10	100	91.870	ENSHGLG00100001769	LSM10	100	91.870	Heterocephalus_glaber_male
ENSUAMG00000020265	LSM10	86	67.925	ENSIPUG00000005808	oscp1a	92	67.925	Ictalurus_punctatus
ENSUAMG00000020265	LSM10	100	95.122	ENSSTOG00000000606	LSM10	100	95.122	Ictidomys_tridecemlineatus
ENSUAMG00000020265	LSM10	98	66.942	ENSKMAG00000012143	oscp1a	99	66.942	Kryptolebias_marmoratus
ENSUAMG00000020265	LSM10	98	64.167	ENSLBEG00000017764	oscp1a	98	64.167	Labrus_bergylta
ENSUAMG00000020265	LSM10	100	75.610	ENSLACG00000015904	LSM10	95	75.610	Latimeria_chalumnae
ENSUAMG00000020265	LSM10	98	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSUAMG00000020265	LSM10	100	92.683	ENSLAFG00000009600	LSM10	100	92.683	Loxodonta_africana
ENSUAMG00000020265	LSM10	100	90.244	ENSMFAG00000009115	LSM10	100	90.244	Macaca_fascicularis
ENSUAMG00000020265	LSM10	100	90.244	ENSMMUG00000017338	LSM10	100	90.244	Macaca_mulatta
ENSUAMG00000020265	LSM10	100	90.244	ENSMNEG00000020023	LSM10	100	90.244	Macaca_nemestrina
ENSUAMG00000020265	LSM10	100	90.244	ENSMLEG00000025150	LSM10	100	90.244	Mandrillus_leucophaeus
ENSUAMG00000020265	LSM10	98	65.833	ENSMAMG00000004427	oscp1a	98	65.833	Mastacembelus_armatus
ENSUAMG00000020265	LSM10	96	67.797	ENSMZEG00005026307	oscp1a	96	67.797	Maylandia_zebra
ENSUAMG00000020265	LSM10	100	73.984	ENSMGAG00000015707	LSM10	100	73.984	Meleagris_gallopavo
ENSUAMG00000020265	LSM10	98	90.083	ENSMAUG00000016624	Lsm10	99	90.083	Mesocricetus_auratus
ENSUAMG00000020265	LSM10	98	90.909	ENSMOCG00000021943	Lsm10	99	90.909	Microtus_ochrogaster
ENSUAMG00000020265	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSUAMG00000020265	LSM10	100	84.553	ENSMODG00000023328	LSM10	100	84.553	Monodelphis_domestica
ENSUAMG00000020265	LSM10	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSUAMG00000020265	LSM10	98	92.562	MGP_CAROLIEiJ_G0026467	Lsm10	100	94.624	Mus_caroli
ENSUAMG00000020265	LSM10	98	91.736	ENSMUSG00000050188	Lsm10	100	93.548	Mus_musculus
ENSUAMG00000020265	LSM10	98	91.736	MGP_PahariEiJ_G0028798	Lsm10	100	93.548	Mus_pahari
ENSUAMG00000020265	LSM10	98	91.736	MGP_SPRETEiJ_G0027446	Lsm10	100	93.548	Mus_spretus
ENSUAMG00000020265	LSM10	100	97.561	ENSMPUG00000018593	LSM10	100	97.561	Mustela_putorius_furo
ENSUAMG00000020265	LSM10	100	91.057	ENSMLUG00000023895	LSM10	100	91.057	Myotis_lucifugus
ENSUAMG00000020265	LSM10	100	91.870	ENSNGAG00000015011	Lsm10	100	91.870	Nannospalax_galili
ENSUAMG00000020265	LSM10	96	68.644	ENSNBRG00000014306	oscp1a	96	68.644	Neolamprologus_brichardi
ENSUAMG00000020265	LSM10	100	90.244	ENSNLEG00000033754	LSM10	100	90.244	Nomascus_leucogenys
ENSUAMG00000020265	LSM10	100	84.553	ENSMEUG00000006313	LSM10	100	84.553	Notamacropus_eugenii
ENSUAMG00000020265	LSM10	100	90.244	ENSOPRG00000001699	LSM10	100	90.244	Ochotona_princeps
ENSUAMG00000020265	LSM10	100	93.496	ENSODEG00000019161	LSM10	100	93.496	Octodon_degus
ENSUAMG00000020265	LSM10	96	68.644	ENSONIG00000020904	oscp1a	97	68.644	Oreochromis_niloticus
ENSUAMG00000020265	LSM10	100	79.675	ENSOANG00000002066	LSM10	100	79.675	Ornithorhynchus_anatinus
ENSUAMG00000020265	LSM10	100	89.431	ENSOCUG00000005333	LSM10	100	89.431	Oryctolagus_cuniculus
ENSUAMG00000020265	LSM10	97	65.546	ENSORLG00000009504	oscp1a	98	65.546	Oryzias_latipes
ENSUAMG00000020265	LSM10	97	65.546	ENSORLG00020016201	oscp1a	98	65.546	Oryzias_latipes_hni
ENSUAMG00000020265	LSM10	97	66.387	ENSORLG00015007794	oscp1a	98	66.387	Oryzias_latipes_hsok
ENSUAMG00000020265	LSM10	100	94.309	ENSOGAG00000002653	LSM10	100	94.309	Otolemur_garnettii
ENSUAMG00000020265	LSM10	98	92.500	ENSOARG00000009596	LSM10	98	92.500	Ovis_aries
ENSUAMG00000020265	LSM10	100	89.431	ENSPPAG00000023465	LSM10	100	89.431	Pan_paniscus
ENSUAMG00000020265	LSM10	100	95.122	ENSPPRG00000014619	LSM10	100	95.122	Panthera_pardus
ENSUAMG00000020265	LSM10	100	95.122	ENSPTIG00000004613	LSM10	100	95.122	Panthera_tigris_altaica
ENSUAMG00000020265	LSM10	100	89.431	ENSPTRG00000000539	LSM10	100	89.431	Pan_troglodytes
ENSUAMG00000020265	LSM10	100	90.244	ENSPANG00000023172	LSM10	100	90.244	Papio_anubis
ENSUAMG00000020265	LSM10	98	66.667	ENSPKIG00000003728	oscp1a	97	66.667	Paramormyrops_kingsleyae
ENSUAMG00000020265	LSM10	100	72.358	ENSPSIG00000000590	LSM10	100	72.358	Pelodiscus_sinensis
ENSUAMG00000020265	LSM10	62	64.474	ENSPMGG00000015718	oscp1a	99	64.474	Periophthalmus_magnuspinnatus
ENSUAMG00000020265	LSM10	84	84.466	ENSPCIG00000014865	LSM10	76	84.466	Phascolarctos_cinereus
ENSUAMG00000020265	LSM10	91	68.750	ENSPFOG00000020490	oscp1a	95	68.750	Poecilia_formosa
ENSUAMG00000020265	LSM10	91	68.750	ENSPLAG00000016537	oscp1a	85	68.750	Poecilia_latipinna
ENSUAMG00000020265	LSM10	88	69.444	ENSPMEG00000000174	oscp1a	94	69.444	Poecilia_mexicana
ENSUAMG00000020265	LSM10	91	67.857	ENSPREG00000009899	oscp1a	85	67.857	Poecilia_reticulata
ENSUAMG00000020265	LSM10	100	90.244	ENSPPYG00000001539	LSM10	100	90.244	Pongo_abelii
ENSUAMG00000020265	LSM10	100	89.431	ENSPCAG00000002520	LSM10	100	89.431	Procavia_capensis
ENSUAMG00000020265	LSM10	100	92.683	ENSPVAG00000008644	LSM10	100	92.683	Pteropus_vampyrus
ENSUAMG00000020265	LSM10	96	67.797	ENSPNYG00000003138	oscp1a	96	67.797	Pundamilia_nyererei
ENSUAMG00000020265	LSM10	95	66.667	ENSPNAG00000028829	oscp1a	97	66.667	Pygocentrus_nattereri
ENSUAMG00000020265	LSM10	98	92.562	ENSRNOG00000025716	Lsm10	99	92.562	Rattus_norvegicus
ENSUAMG00000020265	LSM10	100	90.244	ENSRBIG00000001561	LSM10	100	90.244	Rhinopithecus_bieti
ENSUAMG00000020265	LSM10	100	90.244	ENSRROG00000011414	LSM10	100	90.244	Rhinopithecus_roxellana
ENSUAMG00000020265	LSM10	100	90.244	ENSSBOG00000036413	-	100	90.244	Saimiri_boliviensis_boliviensis
ENSUAMG00000020265	LSM10	100	83.740	ENSSHAG00000018056	LSM10	100	83.740	Sarcophilus_harrisii
ENSUAMG00000020265	LSM10	98	68.595	ENSSFOG00015019954	lsm10	99	68.595	Scleropages_formosus
ENSUAMG00000020265	LSM10	93	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSUAMG00000020265	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSUAMG00000020265	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSUAMG00000020265	LSM10	100	91.200	ENSSARG00000004211	LSM10	100	92.800	Sorex_araneus
ENSUAMG00000020265	LSM10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSUAMG00000020265	LSM10	100	92.683	ENSSSCG00000038916	LSM10	100	92.683	Sus_scrofa
ENSUAMG00000020265	LSM10	99	71.311	ENSTGUG00000001602	-	100	71.311	Taeniopygia_guttata
ENSUAMG00000020265	LSM10	99	71.311	ENSTGUG00000001600	-	100	71.311	Taeniopygia_guttata
ENSUAMG00000020265	LSM10	97	67.227	ENSTRUG00000010531	oscp1a	96	67.227	Takifugu_rubripes
ENSUAMG00000020265	LSM10	100	91.057	ENSTBEG00000016674	LSM10	100	91.057	Tupaia_belangeri
ENSUAMG00000020265	LSM10	100	99.187	ENSUMAG00000001438	LSM10	57	99.187	Ursus_maritimus
ENSUAMG00000020265	LSM10	100	97.561	ENSVVUG00000023209	LSM10	100	97.561	Vulpes_vulpes
ENSUAMG00000020265	LSM10	100	69.919	ENSXETG00000027631	lsm10	100	69.919	Xenopus_tropicalis
ENSUAMG00000020265	LSM10	98	60.156	ENSXCOG00000018776	oscp1a	81	60.156	Xiphophorus_couchianus
ENSUAMG00000020265	LSM10	88	66.667	ENSXMAG00000019963	oscp1a	86	66.667	Xiphophorus_maculatus