EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000020385 (Gene tree)
Gene ID: -
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 15668 bases
Position: chrLZNR01000815.1:264032-279699
Accession: 30296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000026293	RRM_1	PF00076.22	8.4e-29	1	2
ENSUAMP00000026293	RRM_1	PF00076.22	8.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000029334	RAVER1-201	3023	-	ENSUAMP00000026293	758 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000020385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000020385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000020385	RAVER1	100	92.754	ENSG00000161847	RAVER1	100	93.017	Homo_sapiens
ENSUAMG00000020385	RAVER1	100	97.625	ENSAMEG00000011738	RAVER1	100	97.625	Ailuropoda_melanoleuca
ENSUAMG00000020385	RAVER1	75	58.483	ENSAOCG00000005128	raver1	88	49.167	Amphiprion_ocellaris
ENSUAMG00000020385	RAVER1	72	75.439	ENSAPEG00000010854	raver1	80	78.846	Amphiprion_percula
ENSUAMG00000020385	RAVER1	98	50.265	ENSATEG00000021004	raver1	94	49.801	Anabas_testudineus
ENSUAMG00000020385	RAVER1	82	60.092	ENSACAG00000008386	-	94	58.321	Anolis_carolinensis
ENSUAMG00000020385	RAVER1	100	91.963	ENSANAG00000028226	RAVER1	100	92.622	Aotus_nancymaae
ENSUAMG00000020385	RAVER1	70	85.417	ENSACLG00000018492	raver1	75	85.417	Astatotilapia_calliptera
ENSUAMG00000020385	RAVER1	78	78.333	ENSAMXG00000005132	raver1	84	84.906	Astyanax_mexicanus
ENSUAMG00000020385	RAVER1	100	92.480	ENSBTAG00000015721	RAVER1	100	96.403	Bos_taurus
ENSUAMG00000020385	RAVER1	100	91.831	ENSCJAG00000005671	RAVER1	100	92.490	Callithrix_jacchus
ENSUAMG00000020385	RAVER1	100	95.119	ENSCAFG00000017861	RAVER1	100	95.119	Canis_familiaris
ENSUAMG00000020385	RAVER1	98	95.007	ENSCAFG00020024449	RAVER1	100	95.007	Canis_lupus_dingo
ENSUAMG00000020385	RAVER1	98	92.038	ENSCHIG00000006718	RAVER1	100	92.038	Capra_hircus
ENSUAMG00000020385	RAVER1	89	87.001	ENSTSYG00000027107	RAVER1	100	86.706	Carlito_syrichta
ENSUAMG00000020385	RAVER1	88	89.222	ENSCAPG00000002269	RAVER1	100	89.820	Cavia_aperea
ENSUAMG00000020385	RAVER1	98	90.958	ENSCPOG00000001008	RAVER1	100	91.498	Cavia_porcellus
ENSUAMG00000020385	RAVER1	100	91.963	ENSCCAG00000031723	RAVER1	100	92.358	Cebus_capucinus
ENSUAMG00000020385	RAVER1	100	93.017	ENSCATG00000043863	RAVER1	100	93.412	Cercocebus_atys
ENSUAMG00000020385	RAVER1	98	91.914	ENSCLAG00000009336	RAVER1	100	91.779	Chinchilla_lanigera
ENSUAMG00000020385	RAVER1	100	93.281	ENSCSAG00000007317	RAVER1	86	93.676	Chlorocebus_sabaeus
ENSUAMG00000020385	RAVER1	94	63.192	ENSCPBG00000005349	-	96	62.162	Chrysemys_picta_bellii
ENSUAMG00000020385	RAVER1	100	93.149	ENSCANG00000008337	RAVER1	100	93.544	Colobus_angolensis_palliatus
ENSUAMG00000020385	RAVER1	98	91.105	ENSCGRG00001013260	-	100	91.105	Cricetulus_griseus_chok1gshd
ENSUAMG00000020385	RAVER1	98	91.105	ENSCGRG00000015138	-	100	91.105	Cricetulus_griseus_crigri
ENSUAMG00000020385	RAVER1	73	78.846	ENSCSEG00000021092	raver1	79	78.846	Cynoglossus_semilaevis
ENSUAMG00000020385	RAVER1	94	50.481	ENSCVAG00000013971	raver1	91	49.794	Cyprinodon_variegatus
ENSUAMG00000020385	RAVER1	67	93.243	ENSDNOG00000035742	-	75	93.243	Dasypus_novemcinctus
ENSUAMG00000020385	RAVER1	98	84.697	ENSDORG00000010106	-	100	84.169	Dipodomys_ordii
ENSUAMG00000020385	RAVER1	63	89.231	ENSETEG00000008201	-	74	89.340	Echinops_telfairi
ENSUAMG00000020385	RAVER1	64	96.526	ENSEASG00005010544	-	88	96.526	Equus_asinus_asinus
ENSUAMG00000020385	RAVER1	100	95.778	ENSECAG00000024966	RAVER1	100	95.778	Equus_caballus
ENSUAMG00000020385	RAVER1	96	51.020	ENSELUG00000023287	raver1	94	51.757	Esox_lucius
ENSUAMG00000020385	RAVER1	100	97.493	ENSFCAG00000009435	RAVER1	100	97.493	Felis_catus
ENSUAMG00000020385	RAVER1	98	91.375	ENSFDAG00000015113	RAVER1	100	91.644	Fukomys_damarensis
ENSUAMG00000020385	RAVER1	94	50.820	ENSGMOG00000003649	raver1	96	50.621	Gadus_morhua
ENSUAMG00000020385	RAVER1	65	46.293	ENSGALG00000050608	-	53	46.184	Gallus_gallus
ENSUAMG00000020385	RAVER1	99	49.806	ENSGAFG00000015944	raver1	68	66.585	Gambusia_affinis
ENSUAMG00000020385	RAVER1	94	63.418	ENSGAGG00000011748	-	96	77.419	Gopherus_agassizii
ENSUAMG00000020385	RAVER1	100	92.490	ENSGGOG00000006015	RAVER1	100	92.754	Gorilla_gorilla
ENSUAMG00000020385	RAVER1	98	90.970	ENSHGLG00000015460	RAVER1	100	90.701	Heterocephalus_glaber_female
ENSUAMG00000020385	RAVER1	98	90.970	ENSHGLG00100000812	RAVER1	100	90.701	Heterocephalus_glaber_male
ENSUAMG00000020385	RAVER1	77	62.963	ENSHCOG00000000449	raver1	78	58.498	Hippocampus_comes
ENSUAMG00000020385	RAVER1	94	52.295	ENSIPUG00000013153	raver1	89	56.863	Ictalurus_punctatus
ENSUAMG00000020385	RAVER1	98	93.540	ENSSTOG00000003241	RAVER1	100	93.674	Ictidomys_tridecemlineatus
ENSUAMG00000020385	RAVER1	98	91.532	ENSJJAG00000018219	-	100	91.398	Jaculus_jaculus
ENSUAMG00000020385	RAVER1	96	50.067	ENSKMAG00000017355	raver1	93	50.135	Kryptolebias_marmoratus
ENSUAMG00000020385	RAVER1	66	59.091	ENSLBEG00000008268	raver1	70	58.580	Labrus_bergylta
ENSUAMG00000020385	RAVER1	88	61.714	ENSLACG00000005809	-	99	61.396	Latimeria_chalumnae
ENSUAMG00000020385	RAVER1	94	55.720	ENSLOCG00000007500	raver1	92	54.913	Lepisosteus_oculatus
ENSUAMG00000020385	RAVER1	98	92.588	ENSLAFG00000003664	-	100	93.127	Loxodonta_africana
ENSUAMG00000020385	RAVER1	100	92.490	ENSMFAG00000037977	RAVER1	100	93.149	Macaca_fascicularis
ENSUAMG00000020385	RAVER1	100	93.017	ENSMMUG00000014897	RAVER1	100	93.412	Macaca_mulatta
ENSUAMG00000020385	RAVER1	100	93.017	ENSMNEG00000028390	RAVER1	100	93.412	Macaca_nemestrina
ENSUAMG00000020385	RAVER1	100	93.149	ENSMLEG00000041959	RAVER1	100	93.544	Mandrillus_leucophaeus
ENSUAMG00000020385	RAVER1	73	77.358	ENSMAMG00000012059	raver1	93	50.404	Mastacembelus_armatus
ENSUAMG00000020385	RAVER1	70	85.417	ENSMZEG00005019002	raver1	75	85.417	Maylandia_zebra
ENSUAMG00000020385	RAVER1	98	89.919	ENSMAUG00000017948	-	100	89.785	Mesocricetus_auratus
ENSUAMG00000020385	RAVER1	99	92.074	ENSMICG00000010326	RAVER1	99	91.942	Microcebus_murinus
ENSUAMG00000020385	RAVER1	98	90.970	ENSMOCG00000015553	-	100	90.970	Microtus_ochrogaster
ENSUAMG00000020385	RAVER1	97	50.335	ENSMMOG00000012093	raver1	77	85.417	Mola_mola
ENSUAMG00000020385	RAVER1	96	77.100	ENSMODG00000005584	-	91	77.328	Monodelphis_domestica
ENSUAMG00000020385	RAVER1	98	88.770	MGP_CAROLIEiJ_G0031860	-	100	88.770	Mus_caroli
ENSUAMG00000020385	RAVER1	98	89.037	ENSMUSG00000010205	Raver1	100	89.171	Mus_musculus
ENSUAMG00000020385	RAVER1	98	87.766	MGP_PahariEiJ_G0014726	-	100	88.697	Mus_pahari
ENSUAMG00000020385	RAVER1	98	88.904	MGP_SPRETEiJ_G0032984	-	100	89.037	Mus_spretus
ENSUAMG00000020385	RAVER1	100	97.493	ENSMPUG00000006712	RAVER1	100	97.493	Mustela_putorius_furo
ENSUAMG00000020385	RAVER1	98	90.823	ENSMLUG00000012328	RAVER1	100	90.958	Myotis_lucifugus
ENSUAMG00000020385	RAVER1	98	89.892	ENSNGAG00000001260	-	100	89.892	Nannospalax_galili
ENSUAMG00000020385	RAVER1	75	63.750	ENSNBRG00000010139	raver1	78	55.556	Neolamprologus_brichardi
ENSUAMG00000020385	RAVER1	100	92.622	ENSNLEG00000012181	RAVER1	100	93.017	Nomascus_leucogenys
ENSUAMG00000020385	RAVER1	88	76.339	ENSMEUG00000003281	-	100	76.190	Notamacropus_eugenii
ENSUAMG00000020385	RAVER1	98	91.644	ENSODEG00000016260	RAVER1	100	91.240	Octodon_degus
ENSUAMG00000020385	RAVER1	74	62.500	ENSONIG00000001559	raver1	99	50.759	Oreochromis_niloticus
ENSUAMG00000020385	RAVER1	100	84.169	ENSOCUG00000020918	RAVER1	100	85.356	Oryctolagus_cuniculus
ENSUAMG00000020385	RAVER1	66	67.157	ENSORLG00000005458	raver1	68	67.157	Oryzias_latipes
ENSUAMG00000020385	RAVER1	94	50.554	ENSORLG00020004392	raver1	67	67.677	Oryzias_latipes_hni
ENSUAMG00000020385	RAVER1	66	66.667	ENSORLG00015017222	raver1	68	66.667	Oryzias_latipes_hsok
ENSUAMG00000020385	RAVER1	59	81.633	ENSOMEG00000023956	raver1	67	81.633	Oryzias_melastigma
ENSUAMG00000020385	RAVER1	100	93.536	ENSOGAG00000011071	RAVER1	100	93.536	Otolemur_garnettii
ENSUAMG00000020385	RAVER1	100	89.426	ENSOARG00000015886	RAVER1	100	90.501	Ovis_aries
ENSUAMG00000020385	RAVER1	100	92.754	ENSPPAG00000002611	RAVER1	100	93.017	Pan_paniscus
ENSUAMG00000020385	RAVER1	100	97.889	ENSPPRG00000009912	RAVER1	100	97.889	Panthera_pardus
ENSUAMG00000020385	RAVER1	100	92.754	ENSPTRG00000010466	RAVER1	100	93.017	Pan_troglodytes
ENSUAMG00000020385	RAVER1	100	92.885	ENSPANG00000004122	RAVER1	100	93.281	Papio_anubis
ENSUAMG00000020385	RAVER1	98	90.579	ENSPEMG00000016411	-	100	90.983	Peromyscus_maniculatus_bairdii
ENSUAMG00000020385	RAVER1	98	78.743	ENSPCIG00000018695	-	100	77.674	Phascolarctos_cinereus
ENSUAMG00000020385	RAVER1	78	60.417	ENSPFOG00000007016	raver1	68	65.330	Poecilia_formosa
ENSUAMG00000020385	RAVER1	59	69.722	ENSPLAG00000020793	raver1	63	68.571	Poecilia_latipinna
ENSUAMG00000020385	RAVER1	95	51.552	ENSPMEG00000011220	raver1	69	67.153	Poecilia_mexicana
ENSUAMG00000020385	RAVER1	71	88.372	ENSPREG00000006864	raver1	78	88.372	Poecilia_reticulata
ENSUAMG00000020385	RAVER1	100	91.953	ENSPPYG00000010514	RAVER1	85	92.622	Pongo_abelii
ENSUAMG00000020385	RAVER1	100	94.211	ENSPCOG00000026605	RAVER1	100	94.474	Propithecus_coquereli
ENSUAMG00000020385	RAVER1	98	93.927	ENSPVAG00000003689	RAVER1	100	94.062	Pteropus_vampyrus
ENSUAMG00000020385	RAVER1	59	82.353	ENSPNYG00000013284	raver1	64	82.353	Pundamilia_nyererei
ENSUAMG00000020385	RAVER1	98	50.455	ENSPNAG00000015476	raver1	99	50.509	Pygocentrus_nattereri
ENSUAMG00000020385	RAVER1	98	88.369	ENSRNOG00000020710	Raver1	100	88.904	Rattus_norvegicus
ENSUAMG00000020385	RAVER1	100	93.017	ENSRBIG00000034702	RAVER1	100	93.281	Rhinopithecus_bieti
ENSUAMG00000020385	RAVER1	100	90.250	ENSRROG00000031186	RAVER1	100	90.250	Rhinopithecus_roxellana
ENSUAMG00000020385	RAVER1	100	89.592	ENSSBOG00000023423	RAVER1	100	89.592	Saimiri_boliviensis_boliviensis
ENSUAMG00000020385	RAVER1	88	77.139	ENSSHAG00000008181	-	90	76.844	Sarcophilus_harrisii
ENSUAMG00000020385	RAVER1	94	47.849	ENSSDUG00000021063	raver1	78	82.000	Seriola_dumerili
ENSUAMG00000020385	RAVER1	76	60.041	ENSSLDG00000014505	raver1	91	50.970	Seriola_lalandi_dorsalis
ENSUAMG00000020385	RAVER1	76	60.729	ENSSPAG00000000688	raver1	80	59.800	Stegastes_partitus
ENSUAMG00000020385	RAVER1	100	95.910	ENSSSCG00000013650	-	100	95.910	Sus_scrofa
ENSUAMG00000020385	RAVER1	96	49.664	ENSTRUG00000025641	raver1	93	49.531	Takifugu_rubripes
ENSUAMG00000020385	RAVER1	98	94.467	ENSTTRG00000009552	RAVER1	100	94.602	Tursiops_truncatus
ENSUAMG00000020385	RAVER1	100	95.119	ENSVVUG00000028976	RAVER1	100	95.119	Vulpes_vulpes
ENSUAMG00000020385	RAVER1	98	55.817	ENSXETG00000011622	raver1	100	54.368	Xenopus_tropicalis
ENSUAMG00000020385	RAVER1	97	51.075	ENSXCOG00000016368	raver1	69	65.311	Xiphophorus_couchianus
ENSUAMG00000020385	RAVER1	97	50.334	ENSXMAG00000000217	raver1	94	49.200	Xiphophorus_maculatus