EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000020711 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 7810 bases
Position: chrLZNR01000127.1:735350-743159
Accession: 28117
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000026778	RRM_1	PF00076.22	7e-18	1	1
ENSUAMP00000026775	RRM_1	PF00076.22	7.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000029865	RBM42-202	1638	-	ENSUAMP00000026778	448 (aa)	-	-
ENSUAMT00000029862	RBM42-201	1725	-	ENSUAMP00000026775	477 (aa)	-	UPI0004E011E4

Gene Model

Click here to download ENSUAMG00000020711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000020711's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000020711	RBM42	100	97.917	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSUAMG00000020711	RBM42	100	99.374	ENSAMEG00000000524	RBM42	100	99.374	Ailuropoda_melanoleuca
ENSUAMG00000020711	RBM42	100	97.694	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSUAMG00000020711	RBM42	100	97.904	ENSBTAG00000013440	RBM42	100	97.904	Bos_taurus
ENSUAMG00000020711	RBM42	100	98.214	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSUAMG00000020711	RBM42	100	92.453	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSUAMG00000020711	RBM42	100	97.991	ENSCHIG00000009518	RBM42	100	97.991	Capra_hircus
ENSUAMG00000020711	RBM42	100	97.908	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSUAMG00000020711	RBM42	81	98.446	ENSCAPG00000009566	RBM42	99	98.446	Cavia_aperea
ENSUAMG00000020711	RBM42	100	98.214	ENSCPOG00000012365	RBM42	99	98.214	Cavia_porcellus
ENSUAMG00000020711	RBM42	100	98.323	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSUAMG00000020711	RBM42	100	97.708	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSUAMG00000020711	RBM42	100	97.545	ENSCLAG00000012865	RBM42	99	97.545	Chinchilla_lanigera
ENSUAMG00000020711	RBM42	100	97.561	ENSCSAG00000004422	RBM42	100	97.561	Chlorocebus_sabaeus
ENSUAMG00000020711	RBM42	100	87.841	ENSCANG00000030272	RBM42	100	87.841	Colobus_angolensis_palliatus
ENSUAMG00000020711	RBM42	100	97.275	ENSCGRG00001018540	Rbm42	99	97.275	Cricetulus_griseus_chok1gshd
ENSUAMG00000020711	RBM42	100	96.667	ENSDNOG00000037397	RBM42	100	96.667	Dasypus_novemcinctus
ENSUAMG00000020711	RBM42	100	97.098	ENSDORG00000013001	Rbm42	99	97.098	Dipodomys_ordii
ENSUAMG00000020711	RBM42	76	91.304	ENSETEG00000007878	RBM42	71	91.071	Echinops_telfairi
ENSUAMG00000020711	RBM42	100	98.438	ENSEASG00005001074	RBM42	100	98.438	Equus_asinus_asinus
ENSUAMG00000020711	RBM42	100	98.438	ENSECAG00000018215	RBM42	100	98.438	Equus_caballus
ENSUAMG00000020711	RBM42	100	99.161	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSUAMG00000020711	RBM42	100	96.889	ENSFDAG00000007440	RBM42	99	96.889	Fukomys_damarensis
ENSUAMG00000020711	RBM42	100	97.917	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSUAMG00000020711	RBM42	100	96.205	ENSHGLG00000008418	RBM42	99	96.205	Heterocephalus_glaber_female
ENSUAMG00000020711	RBM42	100	96.205	ENSHGLG00100018667	RBM42	99	96.205	Heterocephalus_glaber_male
ENSUAMG00000020711	RBM42	100	97.991	ENSSTOG00000013050	RBM42	99	97.991	Ictidomys_tridecemlineatus
ENSUAMG00000020711	RBM42	100	96.652	ENSJJAG00000010421	Rbm42	99	96.652	Jaculus_jaculus
ENSUAMG00000020711	RBM42	100	95.807	ENSLAFG00000014993	RBM42	99	95.807	Loxodonta_africana
ENSUAMG00000020711	RBM42	100	97.708	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSUAMG00000020711	RBM42	100	97.708	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSUAMG00000020711	RBM42	100	97.708	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSUAMG00000020711	RBM42	100	97.708	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSUAMG00000020711	RBM42	100	98.532	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSUAMG00000020711	RBM42	100	97.065	ENSMOCG00000000405	Rbm42	99	97.065	Microtus_ochrogaster
ENSUAMG00000020711	RBM42	100	97.065	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.065	Mus_caroli
ENSUAMG00000020711	RBM42	100	97.065	ENSMUSG00000036733	Rbm42	99	97.065	Mus_musculus
ENSUAMG00000020711	RBM42	100	97.065	MGP_PahariEiJ_G0012770	Rbm42	99	97.065	Mus_pahari
ENSUAMG00000020711	RBM42	100	97.065	MGP_SPRETEiJ_G0030632	Rbm42	99	97.065	Mus_spretus
ENSUAMG00000020711	RBM42	100	99.330	ENSMPUG00000006288	RBM42	100	99.330	Mustela_putorius_furo
ENSUAMG00000020711	RBM42	100	97.275	ENSMLUG00000011334	RBM42	100	97.275	Myotis_lucifugus
ENSUAMG00000020711	RBM42	100	97.065	ENSNGAG00000019698	Rbm42	99	97.065	Nannospalax_galili
ENSUAMG00000020711	RBM42	70	98.204	ENSNLEG00000011272	-	94	91.341	Nomascus_leucogenys
ENSUAMG00000020711	RBM42	96	82.251	ENSMEUG00000016300	RBM42	100	81.930	Notamacropus_eugenii
ENSUAMG00000020711	RBM42	100	94.130	ENSOPRG00000001229	RBM42	100	92.243	Ochotona_princeps
ENSUAMG00000020711	RBM42	100	97.768	ENSODEG00000013705	RBM42	99	97.768	Octodon_degus
ENSUAMG00000020711	RBM42	100	97.118	ENSOCUG00000003337	RBM42	100	97.118	Oryctolagus_cuniculus
ENSUAMG00000020711	RBM42	100	97.275	ENSOGAG00000004144	RBM42	100	97.275	Otolemur_garnettii
ENSUAMG00000020711	RBM42	98	89.507	ENSOARG00000004926	RBM42	98	92.857	Ovis_aries
ENSUAMG00000020711	RBM42	100	98.113	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSUAMG00000020711	RBM42	100	99.161	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSUAMG00000020711	RBM42	100	98.742	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSUAMG00000020711	RBM42	100	97.917	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSUAMG00000020711	RBM42	100	97.065	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSUAMG00000020711	RBM42	100	97.694	ENSPEMG00000012065	Rbm42	99	97.694	Peromyscus_maniculatus_bairdii
ENSUAMG00000020711	RBM42	100	96.907	ENSPPYG00000009871	RBM42	100	96.907	Pongo_abelii
ENSUAMG00000020711	RBM42	100	84.486	ENSPCAG00000013053	RBM42	100	82.809	Procavia_capensis
ENSUAMG00000020711	RBM42	70	99.099	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSUAMG00000020711	RBM42	100	98.952	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSUAMG00000020711	RBM42	100	98.323	ENSPVAG00000012815	RBM42	100	98.323	Pteropus_vampyrus
ENSUAMG00000020711	RBM42	100	97.275	ENSRNOG00000024278	Rbm42	99	97.275	Rattus_norvegicus
ENSUAMG00000020711	RBM42	100	97.708	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSUAMG00000020711	RBM42	100	98.113	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSUAMG00000020711	RBM42	85	98.768	ENSSBOG00000030666	RBM42	100	98.768	Saimiri_boliviensis_boliviensis
ENSUAMG00000020711	RBM42	100	87.292	ENSSARG00000010724	RBM42	100	87.292	Sorex_araneus
ENSUAMG00000020711	RBM42	100	97.991	ENSSSCG00000002905	RBM42	100	97.991	Sus_scrofa
ENSUAMG00000020711	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	100.000	Ursus_maritimus
ENSUAMG00000020711	RBM42	100	98.661	ENSVVUG00000015117	RBM42	100	98.661	Vulpes_vulpes