EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000020913 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 129243 bases
Position: chrLZNR01001387.1:10615-139857
Accession: 29167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000027084	R3H	PF01424.22	3.2e-10	1	1
ENSUAMP00000027083	R3H	PF01424.22	3.3e-10	1	1
ENSUAMP00000027082	R3H	PF01424.22	3.4e-10	1	1
ENSUAMP00000027081	R3H	PF01424.22	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000030194	R3HDM2-201	4488	-	ENSUAMP00000027081	1024 (aa)	-	-
ENSUAMT00000030195	R3HDM2-202	4734	-	ENSUAMP00000027082	1084 (aa)	-	-
ENSUAMT00000030196	R3HDM2-203	4638	-	ENSUAMP00000027083	1052 (aa)	-	-
ENSUAMT00000030197	R3HDM2-204	4632	-	ENSUAMP00000027084	1050 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000020913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000020913's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000020913	R3HDM2	55	56.593	ENSUAMG00000024806	R3HDM1	96	46.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000020913	R3HDM2	100	93.951	ENSG00000179912	R3HDM2	100	100.000	Homo_sapiens
ENSUAMG00000020913	R3HDM2	99	63.678	ENSAPOG00000020341	r3hdm2	95	67.546	Acanthochromis_polyacanthus
ENSUAMG00000020913	R3HDM2	100	97.512	ENSAMEG00000004812	R3HDM2	100	97.512	Ailuropoda_melanoleuca
ENSUAMG00000020913	R3HDM2	93	63.673	ENSACIG00000016146	r3hdm2	98	65.121	Amphilophus_citrinellus
ENSUAMG00000020913	R3HDM2	99	65.302	ENSAOCG00000023694	r3hdm2	95	67.843	Amphiprion_ocellaris
ENSUAMG00000020913	R3HDM2	99	65.302	ENSAPEG00000008851	r3hdm2	100	67.058	Amphiprion_percula
ENSUAMG00000020913	R3HDM2	99	61.710	ENSATEG00000025024	r3hdm2	100	68.697	Anabas_testudineus
ENSUAMG00000020913	R3HDM2	94	83.578	ENSAPLG00000004298	R3HDM2	94	83.415	Anas_platyrhynchos
ENSUAMG00000020913	R3HDM2	100	79.677	ENSACAG00000006388	R3HDM2	100	81.943	Anolis_carolinensis
ENSUAMG00000020913	R3HDM2	100	93.756	ENSANAG00000025397	-	100	96.973	Aotus_nancymaae
ENSUAMG00000020913	R3HDM2	98	89.353	ENSANAG00000031310	-	100	91.143	Aotus_nancymaae
ENSUAMG00000020913	R3HDM2	99	64.717	ENSACLG00000019106	r3hdm2	95	67.415	Astatotilapia_calliptera
ENSUAMG00000020913	R3HDM2	89	59.627	ENSAMXG00000017180	r3hdm2	99	60.393	Astyanax_mexicanus
ENSUAMG00000020913	R3HDM2	100	94.439	ENSBTAG00000018361	R3HDM2	100	97.679	Bos_taurus
ENSUAMG00000020913	R3HDM2	100	93.463	ENSCJAG00000007365	R3HDM2	100	96.670	Callithrix_jacchus
ENSUAMG00000020913	R3HDM2	98	96.582	ENSCAFG00000000215	R3HDM2	100	98.390	Canis_familiaris
ENSUAMG00000020913	R3HDM2	100	95.965	ENSCAFG00020023713	R3HDM2	100	98.385	Canis_lupus_dingo
ENSUAMG00000020913	R3HDM2	100	95.266	ENSCHIG00000014022	R3HDM2	100	97.074	Capra_hircus
ENSUAMG00000020913	R3HDM2	100	92.878	ENSTSYG00000001449	R3HDM2	100	95.377	Carlito_syrichta
ENSUAMG00000020913	R3HDM2	100	93.854	ENSCPOG00000009217	R3HDM2	100	92.533	Cavia_porcellus
ENSUAMG00000020913	R3HDM2	89	93.421	ENSCCAG00000026083	R3HDM2	100	97.039	Cebus_capucinus
ENSUAMG00000020913	R3HDM2	100	95.072	ENSCATG00000036929	R3HDM2	100	96.973	Cercocebus_atys
ENSUAMG00000020913	R3HDM2	100	94.352	ENSCLAG00000011997	R3HDM2	100	92.951	Chinchilla_lanigera
ENSUAMG00000020913	R3HDM2	100	96.790	ENSCSAG00000004911	R3HDM2	100	96.790	Chlorocebus_sabaeus
ENSUAMG00000020913	R3HDM2	76	91.438	ENSCHOG00000005636	R3HDM2	91	91.438	Choloepus_hoffmanni
ENSUAMG00000020913	R3HDM2	100	80.284	ENSCPBG00000013922	R3HDM2	100	80.208	Chrysemys_picta_bellii
ENSUAMG00000020913	R3HDM2	100	94.879	ENSCANG00000043807	R3HDM2	100	96.771	Colobus_angolensis_palliatus
ENSUAMG00000020913	R3HDM2	100	93.671	ENSCGRG00001017324	R3hdm2	100	93.353	Cricetulus_griseus_chok1gshd
ENSUAMG00000020913	R3HDM2	100	93.671	ENSCGRG00000003862	R3hdm2	100	92.697	Cricetulus_griseus_crigri
ENSUAMG00000020913	R3HDM2	96	66.058	ENSCSEG00000010925	r3hdm2	100	65.455	Cynoglossus_semilaevis
ENSUAMG00000020913	R3HDM2	99	64.393	ENSCVAG00000009058	r3hdm2	100	63.800	Cyprinodon_variegatus
ENSUAMG00000020913	R3HDM2	93	64.337	ENSDARG00000102610	r3hdm2	99	65.745	Danio_rerio
ENSUAMG00000020913	R3HDM2	100	95.837	ENSDNOG00000015033	R3HDM2	100	96.060	Dasypus_novemcinctus
ENSUAMG00000020913	R3HDM2	95	87.335	ENSDORG00000011462	R3hdm2	99	89.822	Dipodomys_ordii
ENSUAMG00000020913	R3HDM2	100	97.466	ENSEASG00005007091	R3HDM2	100	97.466	Equus_asinus_asinus
ENSUAMG00000020913	R3HDM2	100	97.561	ENSECAG00000003157	R3HDM2	100	97.561	Equus_caballus
ENSUAMG00000020913	R3HDM2	96	64.824	ENSELUG00000015969	r3hdm2	100	61.161	Esox_lucius
ENSUAMG00000020913	R3HDM2	100	98.244	ENSFCAG00000000192	R3HDM2	100	96.464	Felis_catus
ENSUAMG00000020913	R3HDM2	89	80.645	ENSFALG00000000255	R3HDM2	100	75.441	Ficedula_albicollis
ENSUAMG00000020913	R3HDM2	100	93.489	ENSFDAG00000019385	R3HDM2	100	94.266	Fukomys_damarensis
ENSUAMG00000020913	R3HDM2	99	63.192	ENSFHEG00000016484	r3hdm2	95	66.929	Fundulus_heteroclitus
ENSUAMG00000020913	R3HDM2	95	65.119	ENSGMOG00000007961	r3hdm2	95	68.000	Gadus_morhua
ENSUAMG00000020913	R3HDM2	100	80.394	ENSGALG00000043736	R3HDM2	100	80.208	Gallus_gallus
ENSUAMG00000020913	R3HDM2	62	36.405	ENSGAFG00000015558	-	88	35.832	Gambusia_affinis
ENSUAMG00000020913	R3HDM2	99	65.352	ENSGAFG00000013887	r3hdm2	100	64.456	Gambusia_affinis
ENSUAMG00000020913	R3HDM2	95	66.438	ENSGACG00000006442	r3hdm2	100	67.815	Gasterosteus_aculeatus
ENSUAMG00000020913	R3HDM2	100	79.050	ENSGAGG00000017797	R3HDM2	100	80.235	Gopherus_agassizii
ENSUAMG00000020913	R3HDM2	100	95.169	ENSGGOG00000015007	R3HDM2	100	97.074	Gorilla_gorilla
ENSUAMG00000020913	R3HDM2	100	94.444	ENSHGLG00000010434	-	100	94.055	Heterocephalus_glaber_female
ENSUAMG00000020913	R3HDM2	89	83.846	ENSHGLG00000010421	-	97	86.644	Heterocephalus_glaber_female
ENSUAMG00000020913	R3HDM2	96	80.977	ENSHGLG00100018871	-	99	83.456	Heterocephalus_glaber_male
ENSUAMG00000020913	R3HDM2	100	94.347	ENSHGLG00100004183	-	100	93.957	Heterocephalus_glaber_male
ENSUAMG00000020913	R3HDM2	99	63.387	ENSHCOG00000001142	r3hdm2	92	66.901	Hippocampus_comes
ENSUAMG00000020913	R3HDM2	99	63.449	ENSIPUG00000023873	r3hdm2	87	79.019	Ictalurus_punctatus
ENSUAMG00000020913	R3HDM2	100	88.121	ENSSTOG00000013424	R3HDM2	100	90.735	Ictidomys_tridecemlineatus
ENSUAMG00000020913	R3HDM2	100	95.707	ENSJJAG00000010001	R3hdm2	100	95.122	Jaculus_jaculus
ENSUAMG00000020913	R3HDM2	96	67.186	ENSKMAG00000012695	r3hdm2	99	67.899	Kryptolebias_marmoratus
ENSUAMG00000020913	R3HDM2	99	64.799	ENSLBEG00000013115	r3hdm2	92	67.026	Labrus_bergylta
ENSUAMG00000020913	R3HDM2	95	72.032	ENSLACG00000019064	r3hdm2	100	71.831	Latimeria_chalumnae
ENSUAMG00000020913	R3HDM2	100	69.238	ENSLOCG00000005976	r3hdm2	100	71.752	Lepisosteus_oculatus
ENSUAMG00000020913	R3HDM2	100	93.487	ENSLAFG00000006510	R3HDM2	100	93.008	Loxodonta_africana
ENSUAMG00000020913	R3HDM2	100	95.169	ENSMFAG00000036385	R3HDM2	100	97.074	Macaca_fascicularis
ENSUAMG00000020913	R3HDM2	100	95.398	ENSMMUG00000021789	R3HDM2	100	97.074	Macaca_mulatta
ENSUAMG00000020913	R3HDM2	100	95.077	ENSMNEG00000025314	R3HDM2	100	96.976	Macaca_nemestrina
ENSUAMG00000020913	R3HDM2	100	95.169	ENSMLEG00000028915	R3HDM2	100	97.074	Mandrillus_leucophaeus
ENSUAMG00000020913	R3HDM2	99	64.804	ENSMAMG00000009793	r3hdm2	95	67.091	Mastacembelus_armatus
ENSUAMG00000020913	R3HDM2	99	65.079	ENSMZEG00005007319	r3hdm2	95	67.812	Maylandia_zebra
ENSUAMG00000020913	R3HDM2	100	93.780	ENSMICG00000012389	R3HDM2	100	96.985	Microcebus_murinus
ENSUAMG00000020913	R3HDM2	100	94.537	ENSMOCG00000014425	R3hdm2	100	94.244	Microtus_ochrogaster
ENSUAMG00000020913	R3HDM2	95	64.474	ENSMMOG00000007448	r3hdm2	99	65.615	Mola_mola
ENSUAMG00000020913	R3HDM2	92	64.444	ENSMALG00000010211	r3hdm2	98	60.551	Monopterus_albus
ENSUAMG00000020913	R3HDM2	100	94.645	MGP_CAROLIEiJ_G0015896	R3hdm2	100	93.281	Mus_caroli
ENSUAMG00000020913	R3HDM2	100	94.932	ENSMUSG00000025404	R3hdm2	100	93.665	Mus_musculus
ENSUAMG00000020913	R3HDM2	100	93.756	MGP_PahariEiJ_G0031189	R3hdm2	100	93.366	Mus_pahari
ENSUAMG00000020913	R3HDM2	100	94.553	MGP_SPRETEiJ_G0016722	R3hdm2	100	93.774	Mus_spretus
ENSUAMG00000020913	R3HDM2	98	95.521	ENSMPUG00000001818	R3HDM2	98	95.376	Mustela_putorius_furo
ENSUAMG00000020913	R3HDM2	100	95.110	ENSMLUG00000004980	R3HDM2	100	94.056	Myotis_lucifugus
ENSUAMG00000020913	R3HDM2	100	96.195	ENSNGAG00000018800	R3hdm2	100	96.195	Nannospalax_galili
ENSUAMG00000020913	R3HDM2	94	62.739	ENSNBRG00000004483	r3hdm2	99	66.107	Neolamprologus_brichardi
ENSUAMG00000020913	R3HDM2	100	94.976	ENSNLEG00000017351	R3HDM2	100	96.872	Nomascus_leucogenys
ENSUAMG00000020913	R3HDM2	99	80.478	ENSMEUG00000008588	R3HDM2	100	79.139	Notamacropus_eugenii
ENSUAMG00000020913	R3HDM2	100	81.496	ENSOPRG00000013670	R3HDM2	100	84.143	Ochotona_princeps
ENSUAMG00000020913	R3HDM2	99	64.190	ENSONIG00000005075	r3hdm2	95	69.358	Oreochromis_niloticus
ENSUAMG00000020913	R3HDM2	100	93.893	ENSOCUG00000013258	R3HDM2	100	93.034	Oryctolagus_cuniculus
ENSUAMG00000020913	R3HDM2	99	63.333	ENSORLG00000005502	r3hdm2	95	65.988	Oryzias_latipes
ENSUAMG00000020913	R3HDM2	99	64.878	ENSORLG00020017069	r3hdm2	95	67.160	Oryzias_latipes_hni
ENSUAMG00000020913	R3HDM2	99	64.972	ENSORLG00015012735	r3hdm2	95	67.258	Oryzias_latipes_hsok
ENSUAMG00000020913	R3HDM2	99	58.683	ENSOMEG00000018079	r3hdm2	99	60.921	Oryzias_melastigma
ENSUAMG00000020913	R3HDM2	96	80.404	ENSOGAG00000027966	-	99	81.101	Otolemur_garnettii
ENSUAMG00000020913	R3HDM2	100	92.241	ENSOGAG00000012055	R3HDM2	100	95.158	Otolemur_garnettii
ENSUAMG00000020913	R3HDM2	100	92.899	ENSOARG00000006929	R3HDM2	100	96.680	Ovis_aries
ENSUAMG00000020913	R3HDM2	100	95.266	ENSPPAG00000034395	R3HDM2	100	97.175	Pan_paniscus
ENSUAMG00000020913	R3HDM2	100	94.927	ENSPPRG00000009240	R3HDM2	100	98.184	Panthera_pardus
ENSUAMG00000020913	R3HDM2	100	94.927	ENSPTIG00000008752	R3HDM2	100	98.184	Panthera_tigris_altaica
ENSUAMG00000020913	R3HDM2	100	95.266	ENSPTRG00000046457	R3HDM2	100	97.175	Pan_troglodytes
ENSUAMG00000020913	R3HDM2	98	92.552	ENSPANG00000024002	R3HDM2	100	94.039	Papio_anubis
ENSUAMG00000020913	R3HDM2	95	70.240	ENSPKIG00000003171	r3hdm2	95	69.920	Paramormyrops_kingsleyae
ENSUAMG00000020913	R3HDM2	65	69.104	ENSPSIG00000006954	R3HDM2	100	72.956	Pelodiscus_sinensis
ENSUAMG00000020913	R3HDM2	93	67.492	ENSPMGG00000007061	r3hdm2	99	69.198	Periophthalmus_magnuspinnatus
ENSUAMG00000020913	R3HDM2	100	93.860	ENSPEMG00000015964	R3hdm2	100	92.440	Peromyscus_maniculatus_bairdii
ENSUAMG00000020913	R3HDM2	100	88.327	ENSPCIG00000023841	R3HDM2	100	89.225	Phascolarctos_cinereus
ENSUAMG00000020913	R3HDM2	58	35.119	ENSPFOG00000008096	-	69	40.685	Poecilia_formosa
ENSUAMG00000020913	R3HDM2	94	75.504	ENSPFOG00000006077	r3hdm2	92	77.522	Poecilia_formosa
ENSUAMG00000020913	R3HDM2	58	34.970	ENSPLAG00000006973	-	69	40.471	Poecilia_latipinna
ENSUAMG00000020913	R3HDM2	99	64.206	ENSPLAG00000002971	r3hdm2	99	63.909	Poecilia_latipinna
ENSUAMG00000020913	R3HDM2	99	64.206	ENSPMEG00000005330	r3hdm2	99	63.909	Poecilia_mexicana
ENSUAMG00000020913	R3HDM2	62	35.268	ENSPMEG00000014457	-	69	40.685	Poecilia_mexicana
ENSUAMG00000020913	R3HDM2	99	64.206	ENSPREG00000008424	r3hdm2	100	62.461	Poecilia_reticulata
ENSUAMG00000020913	R3HDM2	98	86.008	ENSPPYG00000004685	R3HDM2	81	88.306	Pongo_abelii
ENSUAMG00000020913	R3HDM2	88	94.118	ENSPCAG00000014642	R3HDM2	91	95.833	Procavia_capensis
ENSUAMG00000020913	R3HDM2	100	93.951	ENSPCOG00000013201	R3HDM2	100	97.175	Propithecus_coquereli
ENSUAMG00000020913	R3HDM2	100	95.494	ENSPVAG00000003967	R3HDM2	100	95.494	Pteropus_vampyrus
ENSUAMG00000020913	R3HDM2	94	63.015	ENSPNYG00000013479	r3hdm2	100	66.040	Pundamilia_nyererei
ENSUAMG00000020913	R3HDM2	99	64.684	ENSPNAG00000017473	r3hdm2	95	66.535	Pygocentrus_nattereri
ENSUAMG00000020913	R3HDM2	100	92.249	ENSRNOG00000007801	R3hdm2	100	93.152	Rattus_norvegicus
ENSUAMG00000020913	R3HDM2	100	91.122	ENSRBIG00000037403	R3HDM2	100	93.340	Rhinopithecus_bieti
ENSUAMG00000020913	R3HDM2	100	96.878	ENSRROG00000022271	R3HDM2	100	96.872	Rhinopithecus_roxellana
ENSUAMG00000020913	R3HDM2	100	93.756	ENSSBOG00000023547	R3HDM2	100	96.973	Saimiri_boliviensis_boliviensis
ENSUAMG00000020913	R3HDM2	100	86.095	ENSSHAG00000003511	R3HDM2	99	91.373	Sarcophilus_harrisii
ENSUAMG00000020913	R3HDM2	94	68.410	ENSSFOG00015011219	r3hdm2	99	69.684	Scleropages_formosus
ENSUAMG00000020913	R3HDM2	99	64.546	ENSSMAG00000012073	r3hdm2	100	65.759	Scophthalmus_maximus
ENSUAMG00000020913	R3HDM2	99	66.043	ENSSDUG00000019269	r3hdm2	100	65.933	Seriola_dumerili
ENSUAMG00000020913	R3HDM2	99	66.261	ENSSLDG00000005252	r3hdm2	100	65.966	Seriola_lalandi_dorsalis
ENSUAMG00000020913	R3HDM2	90	91.144	ENSSARG00000003958	R3HDM2	94	90.590	Sorex_araneus
ENSUAMG00000020913	R3HDM2	100	76.482	ENSSPUG00000014132	R3HDM2	100	78.426	Sphenodon_punctatus
ENSUAMG00000020913	R3HDM2	52	49.020	ENSSPAG00000016856	-	75	46.273	Stegastes_partitus
ENSUAMG00000020913	R3HDM2	99	65.299	ENSSPAG00000022594	r3hdm2	100	66.986	Stegastes_partitus
ENSUAMG00000020913	R3HDM2	100	94.634	ENSSSCG00000026498	R3HDM2	100	97.881	Sus_scrofa
ENSUAMG00000020913	R3HDM2	73	79.400	ENSTGUG00000015881	R3HDM2	100	78.982	Taeniopygia_guttata
ENSUAMG00000020913	R3HDM2	95	61.531	ENSTRUG00000015075	r3hdm2	99	64.153	Takifugu_rubripes
ENSUAMG00000020913	R3HDM2	90	72.324	ENSTNIG00000007057	r3hdm2	90	79.023	Tetraodon_nigroviridis
ENSUAMG00000020913	R3HDM2	81	97.133	ENSTBEG00000015967	R3HDM2	81	97.133	Tupaia_belangeri
ENSUAMG00000020913	R3HDM2	91	93.148	ENSTTRG00000013082	R3HDM2	93	93.148	Tursiops_truncatus
ENSUAMG00000020913	R3HDM2	100	94.106	ENSUMAG00000019179	R3HDM2	100	94.859	Ursus_maritimus
ENSUAMG00000020913	R3HDM2	100	89.837	ENSVPAG00000008656	R3HDM2	100	89.837	Vicugna_pacos
ENSUAMG00000020913	R3HDM2	98	98.410	ENSVVUG00000018014	R3HDM2	97	98.410	Vulpes_vulpes
ENSUAMG00000020913	R3HDM2	100	73.245	ENSXETG00000017153	r3hdm2	100	72.919	Xenopus_tropicalis
ENSUAMG00000020913	R3HDM2	87	60.323	ENSXCOG00000013882	r3hdm2	100	63.453	Xiphophorus_couchianus
ENSUAMG00000020913	R3HDM2	62	35.821	ENSXMAG00000002994	-	88	35.682	Xiphophorus_maculatus
ENSUAMG00000020913	R3HDM2	99	64.574	ENSXMAG00000017978	r3hdm2	100	63.677	Xiphophorus_maculatus