EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000020937 (Gene tree)
Gene ID: -
Gene Symbol: SWT1
Alias: C1orf26|FLJ20121|HsSwt1
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 104503 bases
Position: chrLZNR01000362.1:462380-566882
Accession: 16785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000027131	PIN_4	PF13638.6	8.5e-28	1	1
ENSUAMP00000027130	PIN_4	PF13638.6	9.5e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000030247	SWT1-201	2694	-	ENSUAMP00000027130	897 (aa)	-	-
ENSUAMT00000030248	SWT1-202	2502	-	ENSUAMP00000027131	833 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000020937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000020937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000020937	SWT1	99	81.016	ENSG00000116668	SWT1	99	78.453	Homo_sapiens
ENSUAMG00000020937	SWT1	65	34.079	ENSAPOG00000014897	-	58	33.448	Acanthochromis_polyacanthus
ENSUAMG00000020937	SWT1	99	97.333	ENSAMEG00000013585	SWT1	100	95.455	Ailuropoda_melanoleuca
ENSUAMG00000020937	SWT1	65	34.310	ENSAOCG00000013932	swt1	58	34.310	Amphiprion_ocellaris
ENSUAMG00000020937	SWT1	65	34.138	ENSAPEG00000009613	-	58	34.138	Amphiprion_percula
ENSUAMG00000020937	SWT1	65	35.862	ENSATEG00000018946	swt1	57	35.862	Anabas_testudineus
ENSUAMG00000020937	SWT1	85	50.000	ENSAPLG00000008607	SWT1	96	49.718	Anas_platyrhynchos
ENSUAMG00000020937	SWT1	69	47.513	ENSACAG00000002276	SWT1	67	47.513	Anolis_carolinensis
ENSUAMG00000020937	SWT1	99	81.137	ENSANAG00000027068	SWT1	99	78.343	Aotus_nancymaae
ENSUAMG00000020937	SWT1	64	33.966	ENSACLG00000009742	swt1	68	33.793	Astatotilapia_calliptera
ENSUAMG00000020937	SWT1	70	40.436	ENSAMXG00000010971	swt1	59	40.678	Astyanax_mexicanus
ENSUAMG00000020937	SWT1	68	79.268	ENSBTAG00000004492	SWT1	99	78.959	Bos_taurus
ENSUAMG00000020937	SWT1	98	80.170	ENSCJAG00000005544	SWT1	100	77.042	Callithrix_jacchus
ENSUAMG00000020937	SWT1	99	89.333	ENSCAFG00000013543	SWT1	99	87.209	Canis_familiaris
ENSUAMG00000020937	SWT1	99	89.697	ENSCAFG00020015648	SWT1	100	87.899	Canis_lupus_dingo
ENSUAMG00000020937	SWT1	99	81.961	ENSCHIG00000023511	SWT1	100	86.125	Capra_hircus
ENSUAMG00000020937	SWT1	99	81.039	ENSTSYG00000010470	SWT1	100	78.587	Carlito_syrichta
ENSUAMG00000020937	SWT1	91	76.933	ENSCPOG00000014251	SWT1	100	73.690	Cavia_porcellus
ENSUAMG00000020937	SWT1	99	81.258	ENSCCAG00000033926	SWT1	99	78.232	Cebus_capucinus
ENSUAMG00000020937	SWT1	99	81.084	ENSCATG00000042210	SWT1	99	85.520	Cercocebus_atys
ENSUAMG00000020937	SWT1	98	77.805	ENSCLAG00000013959	SWT1	99	74.025	Chinchilla_lanigera
ENSUAMG00000020937	SWT1	99	80.723	ENSCSAG00000012895	SWT1	99	78.084	Chlorocebus_sabaeus
ENSUAMG00000020937	SWT1	61	86.875	ENSCHOG00000002211	-	64	86.875	Choloepus_hoffmanni
ENSUAMG00000020937	SWT1	84	52.500	ENSCPBG00000015691	SWT1	79	52.500	Chrysemys_picta_bellii
ENSUAMG00000020937	SWT1	99	81.016	ENSCANG00000032207	SWT1	99	85.103	Colobus_angolensis_palliatus
ENSUAMG00000020937	SWT1	99	74.092	ENSCGRG00001022955	Swt1	100	69.103	Cricetulus_griseus_chok1gshd
ENSUAMG00000020937	SWT1	99	74.092	ENSCGRG00000010224	Swt1	100	71.096	Cricetulus_griseus_crigri
ENSUAMG00000020937	SWT1	67	33.333	ENSCSEG00000017352	swt1	75	33.333	Cynoglossus_semilaevis
ENSUAMG00000020937	SWT1	67	40.000	ENSDARG00000094010	swt1	69	36.547	Danio_rerio
ENSUAMG00000020937	SWT1	88	75.867	ENSDNOG00000005254	SWT1	100	73.551	Dasypus_novemcinctus
ENSUAMG00000020937	SWT1	97	79.430	ENSDORG00000010531	Swt1	95	79.430	Dipodomys_ordii
ENSUAMG00000020937	SWT1	99	79.639	ENSEASG00005005530	SWT1	98	79.639	Equus_asinus_asinus
ENSUAMG00000020937	SWT1	99	81.159	ENSECAG00000012085	SWT1	99	81.146	Equus_caballus
ENSUAMG00000020937	SWT1	85	87.356	ENSEEUG00000003664	SWT1	86	87.356	Erinaceus_europaeus
ENSUAMG00000020937	SWT1	68	37.417	ENSELUG00000020565	swt1	58	37.667	Esox_lucius
ENSUAMG00000020937	SWT1	99	86.699	ENSFCAG00000011286	SWT1	100	85.161	Felis_catus
ENSUAMG00000020937	SWT1	69	52.640	ENSFALG00000003206	SWT1	67	52.640	Ficedula_albicollis
ENSUAMG00000020937	SWT1	99	76.840	ENSFDAG00000007569	SWT1	100	73.392	Fukomys_damarensis
ENSUAMG00000020937	SWT1	69	53.741	ENSGALG00000034230	SWT1	67	53.912	Gallus_gallus
ENSUAMG00000020937	SWT1	80	31.882	ENSGAFG00000007803	-	70	31.882	Gambusia_affinis
ENSUAMG00000020937	SWT1	96	47.901	ENSGAGG00000025050	SWT1	99	58.204	Gopherus_agassizii
ENSUAMG00000020937	SWT1	66	82.418	ENSGGOG00000041167	-	98	82.418	Gorilla_gorilla
ENSUAMG00000020937	SWT1	67	33.833	ENSHBUG00000006188	swt1	68	33.667	Haplochromis_burtoni
ENSUAMG00000020937	SWT1	98	79.289	ENSHGLG00000006542	SWT1	99	75.141	Heterocephalus_glaber_female
ENSUAMG00000020937	SWT1	98	79.289	ENSHGLG00100014408	SWT1	99	76.148	Heterocephalus_glaber_male
ENSUAMG00000020937	SWT1	80	35.311	ENSIPUG00000009113	-	69	35.311	Ictalurus_punctatus
ENSUAMG00000020937	SWT1	99	78.545	ENSSTOG00000010356	SWT1	100	75.580	Ictidomys_tridecemlineatus
ENSUAMG00000020937	SWT1	99	71.636	ENSJJAG00000015927	Swt1	100	69.042	Jaculus_jaculus
ENSUAMG00000020937	SWT1	66	34.130	ENSKMAG00000012533	swt1	58	33.788	Kryptolebias_marmoratus
ENSUAMG00000020937	SWT1	67	36.288	ENSLBEG00000020663	-	59	36.288	Labrus_bergylta
ENSUAMG00000020937	SWT1	82	47.857	ENSLACG00000009194	SWT1	99	47.857	Latimeria_chalumnae
ENSUAMG00000020937	SWT1	65	41.906	ENSLOCG00000001749	swt1	98	41.544	Lepisosteus_oculatus
ENSUAMG00000020937	SWT1	70	86.905	ENSLAFG00000004346	-	100	86.905	Loxodonta_africana
ENSUAMG00000020937	SWT1	99	80.602	ENSMFAG00000031793	SWT1	99	84.957	Macaca_fascicularis
ENSUAMG00000020937	SWT1	99	78.162	ENSMMUG00000013882	SWT1	99	82.302	Macaca_mulatta
ENSUAMG00000020937	SWT1	99	80.482	ENSMNEG00000035502	SWT1	99	84.786	Macaca_nemestrina
ENSUAMG00000020937	SWT1	99	81.499	ENSMLEG00000038692	SWT1	99	85.520	Mandrillus_leucophaeus
ENSUAMG00000020937	SWT1	67	34.000	ENSMZEG00005018489	swt1	68	33.833	Maylandia_zebra
ENSUAMG00000020937	SWT1	69	52.421	ENSMGAG00000000973	SWT1	100	52.421	Meleagris_gallopavo
ENSUAMG00000020937	SWT1	99	67.191	ENSMAUG00000007996	Swt1	97	64.673	Mesocricetus_auratus
ENSUAMG00000020937	SWT1	99	83.092	ENSMICG00000014975	SWT1	100	80.353	Microcebus_murinus
ENSUAMG00000020937	SWT1	99	72.518	ENSMOCG00000009776	Swt1	98	69.546	Microtus_ochrogaster
ENSUAMG00000020937	SWT1	99	61.420	ENSMODG00000007472	SWT1	99	58.944	Monodelphis_domestica
ENSUAMG00000020937	SWT1	65	35.739	ENSMALG00000019308	swt1	57	35.739	Monopterus_albus
ENSUAMG00000020937	SWT1	98	71.498	MGP_CAROLIEiJ_G0014692	Swt1	99	68.404	Mus_caroli
ENSUAMG00000020937	SWT1	98	70.646	ENSMUSG00000052748	Swt1	98	67.814	Mus_musculus
ENSUAMG00000020937	SWT1	98	73.236	MGP_PahariEiJ_G0027928	Swt1	98	69.878	Mus_pahari
ENSUAMG00000020937	SWT1	98	71.620	MGP_SPRETEiJ_G0015499	Swt1	98	68.590	Mus_spretus
ENSUAMG00000020937	SWT1	99	90.534	ENSMPUG00000011913	SWT1	100	88.692	Mustela_putorius_furo
ENSUAMG00000020937	SWT1	99	79.056	ENSMLUG00000001142	SWT1	98	77.248	Myotis_lucifugus
ENSUAMG00000020937	SWT1	99	75.151	ENSNGAG00000021080	Swt1	98	72.757	Nannospalax_galili
ENSUAMG00000020937	SWT1	99	80.290	ENSNLEG00000018031	SWT1	99	77.238	Nomascus_leucogenys
ENSUAMG00000020937	SWT1	95	49.627	ENSMEUG00000000236	-	88	49.502	Notamacropus_eugenii
ENSUAMG00000020937	SWT1	88	69.231	ENSOPRG00000000692	SWT1	88	68.483	Ochotona_princeps
ENSUAMG00000020937	SWT1	72	33.233	ENSONIG00000009994	swt1	99	35.189	Oreochromis_niloticus
ENSUAMG00000020937	SWT1	94	56.894	ENSOANG00000001013	-	100	56.770	Ornithorhynchus_anatinus
ENSUAMG00000020937	SWT1	99	71.532	ENSOCUG00000004901	SWT1	99	68.137	Oryctolagus_cuniculus
ENSUAMG00000020937	SWT1	65	32.931	ENSORLG00000009682	swt1	58	33.448	Oryzias_latipes
ENSUAMG00000020937	SWT1	69	33.011	ENSORLG00020011654	swt1	62	33.011	Oryzias_latipes_hni
ENSUAMG00000020937	SWT1	65	33.448	ENSORLG00015007734	swt1	59	33.448	Oryzias_latipes_hsok
ENSUAMG00000020937	SWT1	65	35.000	ENSOMEG00000006607	swt1	57	35.000	Oryzias_melastigma
ENSUAMG00000020937	SWT1	99	80.290	ENSOGAG00000016195	SWT1	100	77.655	Otolemur_garnettii
ENSUAMG00000020937	SWT1	99	81.961	ENSOARG00000004156	SWT1	98	79.425	Ovis_aries
ENSUAMG00000020937	SWT1	99	80.361	ENSPPAG00000021400	SWT1	99	78.011	Pan_paniscus
ENSUAMG00000020937	SWT1	99	87.545	ENSPPRG00000023754	SWT1	100	85.730	Panthera_pardus
ENSUAMG00000020937	SWT1	99	87.424	ENSPTIG00000021889	SWT1	100	85.619	Panthera_tigris_altaica
ENSUAMG00000020937	SWT1	99	80.361	ENSPTRG00000001777	SWT1	99	78.011	Pan_troglodytes
ENSUAMG00000020937	SWT1	99	80.482	ENSPANG00000005099	SWT1	99	85.009	Papio_anubis
ENSUAMG00000020937	SWT1	67	37.414	ENSPKIG00000005979	swt1	59	37.414	Paramormyrops_kingsleyae
ENSUAMG00000020937	SWT1	70	57.823	ENSPSIG00000008961	SWT1	64	57.823	Pelodiscus_sinensis
ENSUAMG00000020937	SWT1	99	72.826	ENSPEMG00000008208	Swt1	98	69.623	Peromyscus_maniculatus_bairdii
ENSUAMG00000020937	SWT1	99	61.574	ENSPCIG00000002443	SWT1	99	70.803	Phascolarctos_cinereus
ENSUAMG00000020937	SWT1	78	31.556	ENSPFOG00000010988	-	69	33.333	Poecilia_formosa
ENSUAMG00000020937	SWT1	78	31.556	ENSPLAG00000022908	-	68	31.662	Poecilia_latipinna
ENSUAMG00000020937	SWT1	78	31.412	ENSPMEG00000006943	-	68	31.556	Poecilia_mexicana
ENSUAMG00000020937	SWT1	99	80.290	ENSPPYG00000000415	SWT1	99	77.901	Pongo_abelii
ENSUAMG00000020937	SWT1	93	75.194	ENSPCAG00000008337	SWT1	93	75.194	Procavia_capensis
ENSUAMG00000020937	SWT1	74	85.714	ENSPCOG00000018195	-	94	85.714	Propithecus_coquereli
ENSUAMG00000020937	SWT1	86	81.513	ENSPVAG00000005968	SWT1	79	82.254	Pteropus_vampyrus
ENSUAMG00000020937	SWT1	67	34.000	ENSPNYG00000012934	swt1	68	33.833	Pundamilia_nyererei
ENSUAMG00000020937	SWT1	70	38.308	ENSPNAG00000017795	swt1	61	38.308	Pygocentrus_nattereri
ENSUAMG00000020937	SWT1	99	72.222	ENSRNOG00000032258	Swt1	98	69.724	Rattus_norvegicus
ENSUAMG00000020937	SWT1	99	78.839	ENSRBIG00000040630	SWT1	99	81.678	Rhinopithecus_bieti
ENSUAMG00000020937	SWT1	70	78.803	ENSRROG00000028596	SWT1	98	76.206	Rhinopithecus_roxellana
ENSUAMG00000020937	SWT1	99	81.741	ENSSBOG00000028825	SWT1	99	78.501	Saimiri_boliviensis_boliviensis
ENSUAMG00000020937	SWT1	99	61.268	ENSSHAG00000009241	SWT1	99	59.164	Sarcophilus_harrisii
ENSUAMG00000020937	SWT1	67	40.070	ENSSFOG00015004895	swt1	57	40.070	Scleropages_formosus
ENSUAMG00000020937	SWT1	65	34.310	ENSSDUG00000012345	swt1	58	34.310	Seriola_dumerili
ENSUAMG00000020937	SWT1	65	34.138	ENSSLDG00000003821	swt1	58	34.138	Seriola_lalandi_dorsalis
ENSUAMG00000020937	SWT1	62	50.193	ENSSARG00000011524	-	99	50.193	Sorex_araneus
ENSUAMG00000020937	SWT1	85	48.971	ENSSPUG00000003899	SWT1	79	49.307	Sphenodon_punctatus
ENSUAMG00000020937	SWT1	66	31.919	ENSSPAG00000001030	swt1	59	31.919	Stegastes_partitus
ENSUAMG00000020937	SWT1	99	85.714	ENSSSCG00000015569	SWT1	100	82.392	Sus_scrofa
ENSUAMG00000020937	SWT1	67	54.025	ENSTGUG00000003718	-	100	54.025	Taeniopygia_guttata
ENSUAMG00000020937	SWT1	70	34.560	ENSTRUG00000006420	swt1	67	34.560	Takifugu_rubripes
ENSUAMG00000020937	SWT1	54	88.710	ENSTBEG00000016891	-	54	88.710	Tupaia_belangeri
ENSUAMG00000020937	SWT1	99	82.488	ENSTTRG00000005914	SWT1	100	79.581	Tursiops_truncatus
ENSUAMG00000020937	SWT1	99	99.272	ENSUMAG00000021918	SWT1	100	97.447	Ursus_maritimus
ENSUAMG00000020937	SWT1	92	88.180	ENSVPAG00000011855	SWT1	92	88.180	Vicugna_pacos
ENSUAMG00000020937	SWT1	99	89.818	ENSVVUG00000009182	SWT1	100	87.583	Vulpes_vulpes
ENSUAMG00000020937	SWT1	78	32.709	ENSXMAG00000023472	-	69	32.575	Xiphophorus_maculatus