EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000021120 (Gene tree)
Gene ID: -
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 8773 bases
Position: chrLZNR01006959.1:38249-47021
Accession: 5048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029161	SAP	PF02037.27	3e-10	1	1
ENSUAMP00000029160	SAP	PF02037.27	3.1e-10	1	1
ENSUAMP00000029102	SAP	PF02037.27	3.2e-10	1	1
ENSUAMP00000029057	SAP	PF02037.27	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000032552	HNRNPU-204	2235	-	ENSUAMP00000029161	744 (aa)	-	-
ENSUAMT00000032491	HNRNPU-202	2325	-	ENSUAMP00000029102	774 (aa)	-	-
ENSUAMT00000032442	HNRNPU-201	2478	-	ENSUAMP00000029057	825 (aa)	-	-
ENSUAMT00000032551	HNRNPU-203	2268	-	ENSUAMP00000029160	755 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000021120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000021120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000021120	HNRNPU	81	50.395	ENSUAMG00000010118	-	65	63.415
ENSUAMG00000021120	HNRNPU	74	47.872	ENSUAMG00000025971	-	68	50.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000021120	HNRNPU	100	98.788	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSUAMG00000021120	HNRNPU	79	77.083	ENSAPOG00000017400	hnrnpub	87	77.083	Acanthochromis_polyacanthus
ENSUAMG00000021120	HNRNPU	99	99.625	ENSAMEG00000009145	HNRNPU	100	96.126	Ailuropoda_melanoleuca
ENSUAMG00000021120	HNRNPU	99	54.261	ENSACIG00000012138	hnrnpub	87	80.952	Amphilophus_citrinellus
ENSUAMG00000021120	HNRNPU	79	75.000	ENSAOCG00000015843	hnrnpub	89	61.538	Amphiprion_ocellaris
ENSUAMG00000021120	HNRNPU	79	75.000	ENSAPEG00000014679	hnrnpub	89	61.538	Amphiprion_percula
ENSUAMG00000021120	HNRNPU	93	54.679	ENSATEG00000016178	hnrnpub	81	60.745	Anabas_testudineus
ENSUAMG00000021120	HNRNPU	88	89.034	ENSACAG00000004511	HNRNPU	79	88.871	Anolis_carolinensis
ENSUAMG00000021120	HNRNPU	100	98.790	ENSANAG00000033895	-	100	98.790	Aotus_nancymaae
ENSUAMG00000021120	HNRNPU	78	83.333	ENSACLG00000008165	hnrnpub	85	83.333	Astatotilapia_calliptera
ENSUAMG00000021120	HNRNPU	100	99.030	ENSBTAG00000007606	HNRNPU	100	99.030	Bos_taurus
ENSUAMG00000021120	HNRNPU	100	98.909	ENSCJAG00000016914	HNRNPU	100	98.909	Callithrix_jacchus
ENSUAMG00000021120	HNRNPU	100	97.455	ENSCAFG00020000918	HNRNPU	100	97.455	Canis_lupus_dingo
ENSUAMG00000021120	HNRNPU	100	96.727	ENSCHIG00000004900	HNRNPU	100	96.727	Capra_hircus
ENSUAMG00000021120	HNRNPU	100	98.424	ENSCPOG00000011887	HNRNPU	100	98.424	Cavia_porcellus
ENSUAMG00000021120	HNRNPU	100	98.667	ENSCCAG00000037859	-	100	98.667	Cebus_capucinus
ENSUAMG00000021120	HNRNPU	100	98.667	ENSCATG00000035273	HNRNPU	100	98.667	Cercocebus_atys
ENSUAMG00000021120	HNRNPU	100	98.667	ENSCLAG00000007100	HNRNPU	100	98.667	Chinchilla_lanigera
ENSUAMG00000021120	HNRNPU	100	96.364	ENSCSAG00000009219	HNRNPU	100	96.364	Chlorocebus_sabaeus
ENSUAMG00000021120	HNRNPU	86	100.000	ENSCHOG00000001387	HNRNPU	79	100.000	Choloepus_hoffmanni
ENSUAMG00000021120	HNRNPU	97	87.896	ENSCPBG00000009415	HNRNPU	88	91.532	Chrysemys_picta_bellii
ENSUAMG00000021120	HNRNPU	98	99.060	ENSCANG00000022780	HNRNPU	100	94.424	Colobus_angolensis_palliatus
ENSUAMG00000021120	HNRNPU	99	98.872	ENSCGRG00001020525	Hnrnpu	100	94.061	Cricetulus_griseus_chok1gshd
ENSUAMG00000021120	HNRNPU	80	67.213	ENSCSEG00000010804	hnrnpub	87	72.549	Cynoglossus_semilaevis
ENSUAMG00000021120	HNRNPU	79	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
ENSUAMG00000021120	HNRNPU	77	85.714	ENSDARG00000004735	hnrnpub	99	55.337	Danio_rerio
ENSUAMG00000021120	HNRNPU	78	62.319	ENSDARG00000015206	hnrnpua	99	54.337	Danio_rerio
ENSUAMG00000021120	HNRNPU	100	87.434	ENSDNOG00000000215	HNRNPU	90	100.000	Dasypus_novemcinctus
ENSUAMG00000021120	HNRNPU	100	91.069	ENSDORG00000015491	Hnrnpu	100	91.024	Dipodomys_ordii
ENSUAMG00000021120	HNRNPU	96	99.060	ENSETEG00000014565	HNRNPU	100	91.515	Echinops_telfairi
ENSUAMG00000021120	HNRNPU	99	99.812	ENSEASG00005003017	HNRNPU	100	96.606	Equus_asinus_asinus
ENSUAMG00000021120	HNRNPU	99	99.624	ENSECAG00000007955	HNRNPU	100	96.364	Equus_caballus
ENSUAMG00000021120	HNRNPU	99	53.082	ENSELUG00000010733	hnrnpub	62	65.996	Esox_lucius
ENSUAMG00000021120	HNRNPU	99	53.627	ENSELUG00000011966	hnrnpua	79	61.754	Esox_lucius
ENSUAMG00000021120	HNRNPU	100	99.462	ENSFCAG00000002156	HNRNPU	100	99.462	Felis_catus
ENSUAMG00000021120	HNRNPU	95	99.327	ENSFDAG00000006026	HNRNPU	100	99.327	Fukomys_damarensis
ENSUAMG00000021120	HNRNPU	99	50.835	ENSFHEG00000022639	hnrnpub	88	69.643	Fundulus_heteroclitus
ENSUAMG00000021120	HNRNPU	77	59.314	ENSGMOG00000001755	hnrnpub	99	53.483	Gadus_morhua
ENSUAMG00000021120	HNRNPU	97	87.546	ENSGALG00000010671	HNRNPU	100	77.438	Gallus_gallus
ENSUAMG00000021120	HNRNPU	62	78.261	ENSGAFG00000009369	hnrnpub	84	78.261	Gambusia_affinis
ENSUAMG00000021120	HNRNPU	78	74.000	ENSGACG00000004679	hnrnpub	72	77.083	Gasterosteus_aculeatus
ENSUAMG00000021120	HNRNPU	100	98.303	ENSGGOG00000004061	HNRNPU	100	98.303	Gorilla_gorilla
ENSUAMG00000021120	HNRNPU	78	83.333	ENSHBUG00000012290	hnrnpub	85	83.333	Haplochromis_burtoni
ENSUAMG00000021120	HNRNPU	100	96.984	ENSHGLG00000010594	-	100	96.984	Heterocephalus_glaber_female
ENSUAMG00000021120	HNRNPU	95	99.000	ENSHGLG00100015093	HNRNPU	100	99.007	Heterocephalus_glaber_male
ENSUAMG00000021120	HNRNPU	77	83.333	ENSHCOG00000020091	hnrnpub	83	79.545	Hippocampus_comes
ENSUAMG00000021120	HNRNPU	75	85.000	ENSIPUG00000007749	hnrnpu	96	72.549	Ictalurus_punctatus
ENSUAMG00000021120	HNRNPU	99	98.684	ENSJJAG00000011371	Hnrnpu	100	96.372	Jaculus_jaculus
ENSUAMG00000021120	HNRNPU	99	51.914	ENSKMAG00000004532	hnrnpub	88	59.155	Kryptolebias_marmoratus
ENSUAMG00000021120	HNRNPU	88	56.065	ENSLBEG00000022520	hnrnpub	95	57.863	Labrus_bergylta
ENSUAMG00000021120	HNRNPU	99	62.593	ENSLACG00000017463	HNRNPU	99	62.935	Latimeria_chalumnae
ENSUAMG00000021120	HNRNPU	79	80.435	ENSLOCG00000016652	hnrnpua	85	66.355	Lepisosteus_oculatus
ENSUAMG00000021120	HNRNPU	100	98.182	ENSLAFG00000021377	HNRNPU	100	98.182	Loxodonta_africana
ENSUAMG00000021120	HNRNPU	100	98.667	ENSMFAG00000037308	HNRNPU	100	98.667	Macaca_fascicularis
ENSUAMG00000021120	HNRNPU	100	96.364	ENSMMUG00000021098	HNRNPU	100	96.364	Macaca_mulatta
ENSUAMG00000021120	HNRNPU	100	98.667	ENSMNEG00000043645	HNRNPU	100	98.667	Macaca_nemestrina
ENSUAMG00000021120	HNRNPU	79	73.077	ENSMAMG00000007196	hnrnpub	86	73.077	Mastacembelus_armatus
ENSUAMG00000021120	HNRNPU	78	83.333	ENSMZEG00005003185	hnrnpub	85	83.333	Maylandia_zebra
ENSUAMG00000021120	HNRNPU	99	98.872	ENSMAUG00000008842	Hnrnpu	100	94.061	Mesocricetus_auratus
ENSUAMG00000021120	HNRNPU	100	98.788	ENSMICG00000004616	HNRNPU	100	98.788	Microcebus_murinus
ENSUAMG00000021120	HNRNPU	99	98.684	ENSMOCG00000015623	Hnrnpu	100	93.939	Microtus_ochrogaster
ENSUAMG00000021120	HNRNPU	99	94.862	ENSMODG00000006515	HNRNPU	100	92.588	Monodelphis_domestica
ENSUAMG00000021120	HNRNPU	76	70.588	ENSMALG00000018243	hnrnpub	84	61.655	Monopterus_albus
ENSUAMG00000021120	HNRNPU	100	94.310	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	94.310	Mus_caroli
ENSUAMG00000021120	HNRNPU	100	94.431	ENSMUSG00000039630	Hnrnpu	100	94.431	Mus_musculus
ENSUAMG00000021120	HNRNPU	100	93.591	MGP_PahariEiJ_G0028193	Hnrnpu	100	93.591	Mus_pahari
ENSUAMG00000021120	HNRNPU	100	94.431	MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.431	Mus_spretus
ENSUAMG00000021120	HNRNPU	92	97.749	ENSMLUG00000000475	HNRNPU	100	87.841	Myotis_lucifugus
ENSUAMG00000021120	HNRNPU	99	99.060	ENSNGAG00000019075	Hnrnpu	100	94.667	Nannospalax_galili
ENSUAMG00000021120	HNRNPU	78	83.333	ENSNBRG00000017855	hnrnpub	85	83.333	Neolamprologus_brichardi
ENSUAMG00000021120	HNRNPU	97	90.805	ENSMEUG00000000541	HNRNPU	100	90.217	Notamacropus_eugenii
ENSUAMG00000021120	HNRNPU	70	98.058	ENSODEG00000014458	-	100	98.058	Octodon_degus
ENSUAMG00000021120	HNRNPU	78	83.333	ENSONIG00000001260	hnrnpub	88	85.000	Oreochromis_niloticus
ENSUAMG00000021120	HNRNPU	98	98.886	ENSOCUG00000014469	HNRNPU	93	98.886	Oryctolagus_cuniculus
ENSUAMG00000021120	HNRNPU	79	78.261	ENSORLG00020005363	hnrnpub	86	83.333	Oryzias_latipes_hni
ENSUAMG00000021120	HNRNPU	99	52.232	ENSORLG00015001190	hnrnpub	86	83.333	Oryzias_latipes_hsok
ENSUAMG00000021120	HNRNPU	79	78.261	ENSOMEG00000014951	hnrnpub	86	83.333	Oryzias_melastigma
ENSUAMG00000021120	HNRNPU	100	96.364	ENSOGAG00000014024	HNRNPU	100	96.364	Otolemur_garnettii
ENSUAMG00000021120	HNRNPU	100	88.158	ENSOARG00000004985	HNRNPU	91	99.329	Ovis_aries
ENSUAMG00000021120	HNRNPU	100	98.788	ENSPPAG00000038652	HNRNPU	100	98.788	Pan_paniscus
ENSUAMG00000021120	HNRNPU	100	99.597	ENSPPRG00000002662	HNRNPU	100	99.597	Panthera_pardus
ENSUAMG00000021120	HNRNPU	100	98.788	ENSPTRG00000002182	HNRNPU	100	98.788	Pan_troglodytes
ENSUAMG00000021120	HNRNPU	100	98.522	ENSPANG00000011643	HNRNPU	100	98.522	Papio_anubis
ENSUAMG00000021120	HNRNPU	99	60.648	ENSPKIG00000022332	hnrnpub	87	60.452	Paramormyrops_kingsleyae
ENSUAMG00000021120	HNRNPU	99	58.037	ENSPKIG00000006885	hnrnpua	78	66.560	Paramormyrops_kingsleyae
ENSUAMG00000021120	HNRNPU	100	95.107	ENSPCIG00000008657	HNRNPU	100	95.107	Phascolarctos_cinereus
ENSUAMG00000021120	HNRNPU	79	54.154	ENSPFOG00000002908	hnrnpub	89	60.811	Poecilia_formosa
ENSUAMG00000021120	HNRNPU	81	64.062	ENSPLAG00000004160	hnrnpub	89	60.811	Poecilia_latipinna
ENSUAMG00000021120	HNRNPU	100	91.879	ENSPCOG00000003883	-	100	92.121	Propithecus_coquereli
ENSUAMG00000021120	HNRNPU	100	98.909	ENSPCOG00000018655	-	100	98.909	Propithecus_coquereli
ENSUAMG00000021120	HNRNPU	100	98.788	ENSPVAG00000002581	HNRNPU	100	98.788	Pteropus_vampyrus
ENSUAMG00000021120	HNRNPU	78	83.333	ENSPNYG00000021642	hnrnpub	85	83.333	Pundamilia_nyererei
ENSUAMG00000021120	HNRNPU	99	58.838	ENSPNAG00000001055	hnrnpub	99	58.072	Pygocentrus_nattereri
ENSUAMG00000021120	HNRNPU	100	94.061	ENSRNOG00000033790	Hnrnpu	100	94.061	Rattus_norvegicus
ENSUAMG00000021120	HNRNPU	100	94.788	ENSRBIG00000031519	HNRNPU	100	94.788	Rhinopithecus_bieti
ENSUAMG00000021120	HNRNPU	100	96.364	ENSRROG00000041642	HNRNPU	100	96.364	Rhinopithecus_roxellana
ENSUAMG00000021120	HNRNPU	99	59.179	ENSSFOG00015019004	hnrnpu	98	60.995	Scleropages_formosus
ENSUAMG00000021120	HNRNPU	99	60.193	ENSSFOG00015001124	hnrnpub	86	64.165	Scleropages_formosus
ENSUAMG00000021120	HNRNPU	73	70.588	ENSSMAG00000003607	hnrnpub	83	70.588	Scophthalmus_maximus
ENSUAMG00000021120	HNRNPU	79	70.588	ENSSDUG00000005912	hnrnpub	85	70.588	Seriola_dumerili
ENSUAMG00000021120	HNRNPU	79	70.588	ENSSLDG00000004899	hnrnpub	85	70.588	Seriola_lalandi_dorsalis
ENSUAMG00000021120	HNRNPU	97	91.182	ENSSPUG00000011393	HNRNPU	90	90.807	Sphenodon_punctatus
ENSUAMG00000021120	HNRNPU	73	78.261	ENSSPAG00000011853	hnrnpub	86	78.261	Stegastes_partitus
ENSUAMG00000021120	HNRNPU	100	99.030	ENSSSCG00000010877	HNRNPU	100	99.030	Sus_scrofa
ENSUAMG00000021120	HNRNPU	84	57.738	ENSTRUG00000007759	hnrnpub	85	64.706	Takifugu_rubripes
ENSUAMG00000021120	HNRNPU	99	51.404	ENSTNIG00000009725	hnrnpub	89	75.000	Tetraodon_nigroviridis
ENSUAMG00000021120	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSUAMG00000021120	HNRNPU	99	89.065	ENSUMAG00000012322	HNRNPU	97	99.010	Ursus_maritimus
ENSUAMG00000021120	HNRNPU	86	99.099	ENSVPAG00000010520	HNRNPU	91	99.091	Vicugna_pacos
ENSUAMG00000021120	HNRNPU	100	97.455	ENSVVUG00000026524	HNRNPU	100	97.455	Vulpes_vulpes
ENSUAMG00000021120	HNRNPU	99	75.769	ENSXETG00000011386	hnrnpu	99	71.500	Xenopus_tropicalis
ENSUAMG00000021120	HNRNPU	79	78.261	ENSXMAG00000010356	hnrnpub	86	78.261	Xiphophorus_maculatus