EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000021124 (Gene tree)
Gene ID: -
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 8780 bases
Position: chrLZNR01005225.1:199594-208373
Accession: 4237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000027263	zf-C2H2	PF00096.26	1.5e-26	1	6
ENSUAMP00000027263	zf-C2H2	PF00096.26	1.5e-26	2	6
ENSUAMP00000027263	zf-C2H2	PF00096.26	1.5e-26	3	6
ENSUAMP00000027263	zf-C2H2	PF00096.26	1.5e-26	4	6
ENSUAMP00000027263	zf-C2H2	PF00096.26	1.5e-26	5	6
ENSUAMP00000027263	zf-C2H2	PF00096.26	1.5e-26	6	6
ENSUAMP00000027263	zf-met	PF12874.7	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000030480	GFI1-201	1347	-	ENSUAMP00000027263	448 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000021124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000021124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000021124	GFI1	56	45.238	ENSUAMG00000005458	ZNF235	69	45.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000021124	GFI1	91	88.416	ENSG00000162676	GFI1	100	88.416	Homo_sapiens
ENSUAMG00000021124	GFI1	91	64.563	ENSAPOG00000015189	gfi1ab	100	63.196	Acanthochromis_polyacanthus
ENSUAMG00000021124	GFI1	91	64.720	ENSACIG00000016354	gfi1ab	100	64.720	Amphilophus_citrinellus
ENSUAMG00000021124	GFI1	91	43.807	ENSAOCG00000008339	gfi1ab	100	44.524	Amphiprion_ocellaris
ENSUAMG00000021124	GFI1	91	65.291	ENSAPEG00000023870	gfi1ab	100	63.614	Amphiprion_percula
ENSUAMG00000021124	GFI1	91	61.463	ENSATEG00000009167	gfi1ab	90	59.902	Anabas_testudineus
ENSUAMG00000021124	GFI1	79	77.746	ENSAPLG00000015700	GFI1	99	77.746	Anas_platyrhynchos
ENSUAMG00000021124	GFI1	91	72.662	ENSACAG00000004498	GFI1	100	72.902	Anolis_carolinensis
ENSUAMG00000021124	GFI1	91	86.525	ENSANAG00000019656	GFI1	100	86.998	Aotus_nancymaae
ENSUAMG00000021124	GFI1	91	64.819	ENSACLG00000026458	gfi1ab	93	64.337	Astatotilapia_calliptera
ENSUAMG00000021124	GFI1	91	60.586	ENSAMXG00000006669	GFI1	100	60.586	Astyanax_mexicanus
ENSUAMG00000021124	GFI1	91	63.373	ENSAMXG00000039600	gfi1ab	100	62.892	Astyanax_mexicanus
ENSUAMG00000021124	GFI1	91	89.598	ENSBTAG00000016723	GFI1	100	89.362	Bos_taurus
ENSUAMG00000021124	GFI1	91	86.998	ENSCJAG00000017609	GFI1	100	86.288	Callithrix_jacchus
ENSUAMG00000021124	GFI1	91	91.726	ENSCAFG00000020155	GFI1	100	91.489	Canis_familiaris
ENSUAMG00000021124	GFI1	93	90.762	ENSCAFG00020013371	GFI1	90	90.531	Canis_lupus_dingo
ENSUAMG00000021124	GFI1	91	89.598	ENSCHIG00000016135	GFI1	100	89.362	Capra_hircus
ENSUAMG00000021124	GFI1	91	86.493	ENSCPOG00000011727	GFI1	100	86.493	Cavia_porcellus
ENSUAMG00000021124	GFI1	91	87.707	ENSCCAG00000036072	GFI1	100	86.998	Cebus_capucinus
ENSUAMG00000021124	GFI1	91	88.180	ENSCATG00000037873	GFI1	100	88.180	Cercocebus_atys
ENSUAMG00000021124	GFI1	97	84.562	ENSCLAG00000005915	GFI1	100	82.989	Chinchilla_lanigera
ENSUAMG00000021124	GFI1	78	86.027	ENSCSAG00000001469	GFI1	100	86.027	Chlorocebus_sabaeus
ENSUAMG00000021124	GFI1	91	87.943	ENSCANG00000034077	GFI1	100	87.943	Colobus_angolensis_palliatus
ENSUAMG00000021124	GFI1	91	82.270	ENSCGRG00001015432	Gfi1	100	82.270	Cricetulus_griseus_chok1gshd
ENSUAMG00000021124	GFI1	91	60.382	ENSCSEG00000017729	GFI1	100	60.382	Cynoglossus_semilaevis
ENSUAMG00000021124	GFI1	91	61.165	ENSCVAG00000011828	gfi1ab	100	60.680	Cyprinodon_variegatus
ENSUAMG00000021124	GFI1	91	61.165	ENSCVAG00000004930	GFI1	100	62.077	Cyprinodon_variegatus
ENSUAMG00000021124	GFI1	91	66.265	ENSDARG00000044457	gfi1ab	100	65.083	Danio_rerio
ENSUAMG00000021124	GFI1	92	87.209	ENSDNOG00000000782	GFI1	98	87.442	Dasypus_novemcinctus
ENSUAMG00000021124	GFI1	91	83.529	ENSEBUG00000008075	gfi1ab	57	83.529	Eptatretus_burgeri
ENSUAMG00000021124	GFI1	94	86.486	ENSEASG00005015509	GFI1	87	89.835	Equus_asinus_asinus
ENSUAMG00000021124	GFI1	83	82.902	ENSECAG00000006647	GFI1	92	82.902	Equus_caballus
ENSUAMG00000021124	GFI1	91	82.578	ENSEEUG00000000198	GFI1	100	82.339	Erinaceus_europaeus
ENSUAMG00000021124	GFI1	91	60.048	ENSELUG00000019033	GFI1	100	59.564	Esox_lucius
ENSUAMG00000021124	GFI1	91	66.268	ENSELUG00000003015	gfi1ab	99	65.789	Esox_lucius
ENSUAMG00000021124	GFI1	91	90.780	ENSFCAG00000005914	GFI1	100	90.780	Felis_catus
ENSUAMG00000021124	GFI1	91	62.990	ENSFHEG00000010997	gfi1ab	100	62.927	Fundulus_heteroclitus
ENSUAMG00000021124	GFI1	91	59.719	ENSFHEG00000000341	GFI1	100	60.329	Fundulus_heteroclitus
ENSUAMG00000021124	GFI1	91	62.500	ENSGMOG00000007737	gfi1ab	100	62.260	Gadus_morhua
ENSUAMG00000021124	GFI1	91	75.904	ENSGALG00000043650	GFI1	100	75.904	Gallus_gallus
ENSUAMG00000021124	GFI1	91	58.571	ENSGAFG00000018063	GFI1	100	59.302	Gambusia_affinis
ENSUAMG00000021124	GFI1	91	63.680	ENSGAFG00000016637	gfi1ab	100	62.954	Gambusia_affinis
ENSUAMG00000021124	GFI1	91	64.059	ENSGACG00000004257	gfi1ab	97	64.059	Gasterosteus_aculeatus
ENSUAMG00000021124	GFI1	91	88.416	ENSGGOG00000005320	GFI1	100	88.416	Gorilla_gorilla
ENSUAMG00000021124	GFI1	91	64.878	ENSHBUG00000011969	gfi1ab	100	64.390	Haplochromis_burtoni
ENSUAMG00000021124	GFI1	97	83.964	ENSHGLG00000008020	GFI1	100	86.256	Heterocephalus_glaber_female
ENSUAMG00000021124	GFI1	97	83.742	ENSHGLG00100000610	GFI1	100	86.256	Heterocephalus_glaber_male
ENSUAMG00000021124	GFI1	91	55.093	ENSHCOG00000008590	gfi1ab	100	53.935	Hippocampus_comes
ENSUAMG00000021124	GFI1	91	58.537	ENSHCOG00000019555	GFI1	100	62.136	Hippocampus_comes
ENSUAMG00000021124	GFI1	91	60.482	ENSIPUG00000013414	GFI1	100	59.518	Ictalurus_punctatus
ENSUAMG00000021124	GFI1	91	63.725	ENSIPUG00000010071	gfi1ab	87	63.285	Ictalurus_punctatus
ENSUAMG00000021124	GFI1	91	86.288	ENSSTOG00000014583	GFI1	100	86.288	Ictidomys_tridecemlineatus
ENSUAMG00000021124	GFI1	91	65.207	ENSKMAG00000003810	gfi1ab	100	64.477	Kryptolebias_marmoratus
ENSUAMG00000021124	GFI1	91	64.878	ENSLBEG00000027776	gfi1ab	100	64.634	Labrus_bergylta
ENSUAMG00000021124	GFI1	90	45.209	ENSLACG00000017590	-	55	77.222	Latimeria_chalumnae
ENSUAMG00000021124	GFI1	92	71.122	ENSLACG00000013362	GFI1	99	71.122	Latimeria_chalumnae
ENSUAMG00000021124	GFI1	91	68.660	ENSLOCG00000004711	gfi1ab	100	67.689	Lepisosteus_oculatus
ENSUAMG00000021124	GFI1	91	84.337	ENSLAFG00000018346	GFI1	100	84.337	Loxodonta_africana
ENSUAMG00000021124	GFI1	91	88.180	ENSMFAG00000045801	GFI1	100	88.180	Macaca_fascicularis
ENSUAMG00000021124	GFI1	91	88.180	ENSMNEG00000036338	GFI1	100	88.180	Macaca_nemestrina
ENSUAMG00000021124	GFI1	91	88.180	ENSMLEG00000036181	GFI1	100	88.180	Mandrillus_leucophaeus
ENSUAMG00000021124	GFI1	91	66.098	ENSMAMG00000008125	gfi1ab	100	65.122	Mastacembelus_armatus
ENSUAMG00000021124	GFI1	91	65.375	ENSMZEG00005009895	gfi1ab	100	64.891	Maylandia_zebra
ENSUAMG00000021124	GFI1	79	78.652	ENSMGAG00000008187	GFI1	100	78.652	Meleagris_gallopavo
ENSUAMG00000021124	GFI1	91	88.889	ENSMICG00000047208	GFI1	100	88.889	Microcebus_murinus
ENSUAMG00000021124	GFI1	91	61.111	ENSMMOG00000005556	gfi1ab	100	60.870	Mola_mola
ENSUAMG00000021124	GFI1	91	77.829	ENSMODG00000011802	GFI1	100	78.738	Monodelphis_domestica
ENSUAMG00000021124	GFI1	91	64.634	ENSMALG00000014672	gfi1ab	100	63.814	Monopterus_albus
ENSUAMG00000021124	GFI1	97	81.015	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSUAMG00000021124	GFI1	97	82.340	ENSMUSG00000029275	Gfi1	100	83.688	Mus_musculus
ENSUAMG00000021124	GFI1	97	80.132	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSUAMG00000021124	GFI1	97	81.236	MGP_SPRETEiJ_G0028507	Gfi1	100	83.452	Mus_spretus
ENSUAMG00000021124	GFI1	92	88.808	ENSMPUG00000004178	GFI1	98	89.781	Mustela_putorius_furo
ENSUAMG00000021124	GFI1	92	87.059	ENSMLUG00000015191	GFI1	98	86.353	Myotis_lucifugus
ENSUAMG00000021124	GFI1	91	64.269	ENSNBRG00000015774	gfi1ab	100	63.789	Neolamprologus_brichardi
ENSUAMG00000021124	GFI1	84	86.735	ENSNLEG00000010470	GFI1	97	86.735	Nomascus_leucogenys
ENSUAMG00000021124	GFI1	91	85.748	ENSOPRG00000001473	GFI1	100	86.525	Ochotona_princeps
ENSUAMG00000021124	GFI1	91	65.049	ENSONIG00000019246	gfi1ab	100	64.563	Oreochromis_niloticus
ENSUAMG00000021124	GFI1	78	83.924	ENSOCUG00000023553	GFI1	93	83.924	Oryctolagus_cuniculus
ENSUAMG00000021124	GFI1	91	61.072	ENSORLG00000005060	GFI1	100	60.377	Oryzias_latipes
ENSUAMG00000021124	GFI1	91	62.195	ENSORLG00000013806	gfi1ab	100	62.195	Oryzias_latipes
ENSUAMG00000021124	GFI1	91	62.439	ENSORLG00020001602	gfi1ab	100	62.439	Oryzias_latipes_hni
ENSUAMG00000021124	GFI1	69	64.220	ENSORLG00020002817	GFI1	85	64.725	Oryzias_latipes_hni
ENSUAMG00000021124	GFI1	91	60.930	ENSORLG00015006070	GFI1	100	60.233	Oryzias_latipes_hsok
ENSUAMG00000021124	GFI1	91	59.857	ENSOMEG00000016722	GFI1	100	59.857	Oryzias_melastigma
ENSUAMG00000021124	GFI1	91	81.327	ENSOGAG00000027913	GFI1	100	81.327	Otolemur_garnettii
ENSUAMG00000021124	GFI1	89	97.143	ENSOARG00000016329	GFI1	95	69.466	Ovis_aries
ENSUAMG00000021124	GFI1	91	82.310	ENSPPAG00000042186	GFI1	100	82.310	Pan_paniscus
ENSUAMG00000021124	GFI1	91	90.780	ENSPPRG00000007521	GFI1	100	90.780	Panthera_pardus
ENSUAMG00000021124	GFI1	91	88.180	ENSPTRG00000043053	GFI1	100	88.180	Pan_troglodytes
ENSUAMG00000021124	GFI1	91	88.180	ENSPANG00000016433	GFI1	100	88.180	Papio_anubis
ENSUAMG00000021124	GFI1	91	66.507	ENSPKIG00000004263	GFI1	100	65.566	Paramormyrops_kingsleyae
ENSUAMG00000021124	GFI1	79	78.090	ENSPSIG00000008734	GFI1	97	78.090	Pelodiscus_sinensis
ENSUAMG00000021124	GFI1	91	61.179	ENSPMGG00000012546	gfi1ab	100	60.976	Periophthalmus_magnuspinnatus
ENSUAMG00000021124	GFI1	91	80.235	ENSPCIG00000013728	GFI1	100	80.000	Phascolarctos_cinereus
ENSUAMG00000021124	GFI1	91	63.133	ENSPFOG00000023214	gfi1ab	100	62.410	Poecilia_formosa
ENSUAMG00000021124	GFI1	91	60.000	ENSPLAG00000005376	GFI1	91	60.880	Poecilia_latipinna
ENSUAMG00000021124	GFI1	91	63.133	ENSPLAG00000010879	gfi1ab	98	76.471	Poecilia_latipinna
ENSUAMG00000021124	GFI1	91	63.373	ENSPMEG00000013694	gfi1ab	100	63.814	Poecilia_mexicana
ENSUAMG00000021124	GFI1	91	60.000	ENSPMEG00000019299	GFI1	100	60.748	Poecilia_mexicana
ENSUAMG00000021124	GFI1	91	63.373	ENSPREG00000014097	gfi1ab	100	62.651	Poecilia_reticulata
ENSUAMG00000021124	GFI1	91	54.657	ENSPREG00000007997	GFI1	100	54.745	Poecilia_reticulata
ENSUAMG00000021124	GFI1	91	76.995	ENSPCAG00000011020	GFI1	100	76.995	Procavia_capensis
ENSUAMG00000021124	GFI1	91	87.943	ENSPCOG00000020540	GFI1	100	87.943	Propithecus_coquereli
ENSUAMG00000021124	GFI1	91	87.799	ENSPVAG00000006928	GFI1	100	87.560	Pteropus_vampyrus
ENSUAMG00000021124	GFI1	91	65.133	ENSPNYG00000021183	gfi1ab	100	64.649	Pundamilia_nyererei
ENSUAMG00000021124	GFI1	91	63.902	ENSPNAG00000027258	gfi1ab	100	62.319	Pygocentrus_nattereri
ENSUAMG00000021124	GFI1	91	57.279	ENSPNAG00000028014	GFI1	100	57.279	Pygocentrus_nattereri
ENSUAMG00000021124	GFI1	91	84.397	ENSRNOG00000002042	Gfi1	100	83.215	Rattus_norvegicus
ENSUAMG00000021124	GFI1	91	88.180	ENSRBIG00000036467	GFI1	100	88.180	Rhinopithecus_bieti
ENSUAMG00000021124	GFI1	91	88.180	ENSRROG00000031687	GFI1	100	88.180	Rhinopithecus_roxellana
ENSUAMG00000021124	GFI1	91	87.470	ENSSBOG00000031300	GFI1	100	87.470	Saimiri_boliviensis_boliviensis
ENSUAMG00000021124	GFI1	90	63.690	ENSSFOG00015008114	-	98	62.428	Scleropages_formosus
ENSUAMG00000021124	GFI1	91	69.398	ENSSFOG00015020295	gfi1	100	68.675	Scleropages_formosus
ENSUAMG00000021124	GFI1	91	64.303	ENSSMAG00000002782	gfi1ab	100	63.592	Scophthalmus_maximus
ENSUAMG00000021124	GFI1	91	63.814	ENSSDUG00000022410	gfi1ab	100	63.196	Seriola_dumerili
ENSUAMG00000021124	GFI1	91	63.570	ENSSLDG00000020163	gfi1ab	100	62.954	Seriola_lalandi_dorsalis
ENSUAMG00000021124	GFI1	73	76.471	ENSSPAG00000009140	gfi1ab	99	78.788	Stegastes_partitus
ENSUAMG00000021124	GFI1	91	89.976	ENSSSCG00000006902	GFI1	100	89.976	Sus_scrofa
ENSUAMG00000021124	GFI1	79	78.310	ENSTGUG00000006060	GFI1	100	78.310	Taeniopygia_guttata
ENSUAMG00000021124	GFI1	91	61.985	ENSTRUG00000000415	gfi1ab	100	61.985	Takifugu_rubripes
ENSUAMG00000021124	GFI1	91	61.165	ENSTNIG00000000651	gfi1ab	97	61.985	Tetraodon_nigroviridis
ENSUAMG00000021124	GFI1	91	87.707	ENSTTRG00000000082	GFI1	100	87.707	Tursiops_truncatus
ENSUAMG00000021124	GFI1	91	69.682	ENSXETG00000023006	gfi1	98	69.438	Xenopus_tropicalis
ENSUAMG00000021124	GFI1	91	63.133	ENSXMAG00000010523	gfi1ab	100	62.410	Xiphophorus_maculatus
ENSUAMG00000021124	GFI1	91	53.930	ENSXMAG00000009274	GFI1	70	52.895	Xiphophorus_maculatus