EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000021346 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 40797 bases
Position: chrLZNR01008623.1:28976-69772
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000027606	RRM_1	PF00076.22	9.4e-38	1	3
ENSUAMP00000027606	RRM_1	PF00076.22	9.4e-38	2	3
ENSUAMP00000027606	RRM_1	PF00076.22	9.4e-38	3	3
ENSUAMP00000027607	RRM_1	PF00076.22	9.4e-38	1	3
ENSUAMP00000027607	RRM_1	PF00076.22	9.4e-38	2	3
ENSUAMP00000027607	RRM_1	PF00076.22	9.4e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000030850	RBM47-202	3345	-	ENSUAMP00000027607	590 (aa)	-	-
ENSUAMT00000030849	RBM47-201	2996	-	ENSUAMP00000027606	590 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000021346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000021346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000021346	RBM47	73	58.482	ENSUAMG00000020065	A1CF	74	58.652
ENSUAMG00000021346	RBM47	51	74.333	ENSUAMG00000026593	RBM46	62	74.333
ENSUAMG00000021346	RBM47	52	56.129	ENSUAMG00000027050	HNRNPR	71	45.475
ENSUAMG00000021346	RBM47	51	55.150	ENSUAMG00000008543	SYNCRIP	79	46.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000021346	RBM47	100	96.801	ENSG00000163694	RBM47	100	98.618	Homo_sapiens
ENSUAMG00000021346	RBM47	100	77.722	ENSAPOG00000011062	rbm47	100	77.387	Acanthochromis_polyacanthus
ENSUAMG00000021346	RBM47	100	98.822	ENSAMEG00000009672	RBM47	100	98.822	Ailuropoda_melanoleuca
ENSUAMG00000021346	RBM47	100	76.589	ENSACIG00000011531	rbm47	100	76.254	Amphilophus_citrinellus
ENSUAMG00000021346	RBM47	100	77.219	ENSAOCG00000022245	rbm47	93	84.225	Amphiprion_ocellaris
ENSUAMG00000021346	RBM47	100	77.052	ENSAPEG00000018304	rbm47	93	84.225	Amphiprion_percula
ENSUAMG00000021346	RBM47	100	76.471	ENSATEG00000018400	rbm47	94	77.855	Anabas_testudineus
ENSUAMG00000021346	RBM47	100	89.189	ENSAPLG00000013974	RBM47	100	89.020	Anas_platyrhynchos
ENSUAMG00000021346	RBM47	100	86.311	ENSACAG00000011833	RBM47	100	86.477	Anolis_carolinensis
ENSUAMG00000021346	RBM47	100	96.465	ENSANAG00000029440	RBM47	100	96.465	Aotus_nancymaae
ENSUAMG00000021346	RBM47	100	76.230	ENSACLG00000016902	rbm47	94	84.789	Astatotilapia_calliptera
ENSUAMG00000021346	RBM47	100	75.614	ENSAMXG00000021794	rbm47	95	77.375	Astyanax_mexicanus
ENSUAMG00000021346	RBM47	100	97.306	ENSBTAG00000002356	RBM47	100	97.306	Bos_taurus
ENSUAMG00000021346	RBM47	100	96.134	ENSCJAG00000019385	RBM47	100	96.134	Callithrix_jacchus
ENSUAMG00000021346	RBM47	96	95.789	ENSCAFG00000015898	RBM47	100	94.949	Canis_familiaris
ENSUAMG00000021346	RBM47	87	96.124	ENSCAFG00020010558	RBM47	94	95.714	Canis_lupus_dingo
ENSUAMG00000021346	RBM47	100	97.643	ENSCHIG00000026214	RBM47	100	97.643	Capra_hircus
ENSUAMG00000021346	RBM47	86	80.632	ENSTSYG00000033612	RBM47	92	91.163	Carlito_syrichta
ENSUAMG00000021346	RBM47	100	88.215	ENSCAPG00000008426	RBM47	100	89.226	Cavia_aperea
ENSUAMG00000021346	RBM47	100	95.960	ENSCPOG00000014100	RBM47	100	97.333	Cavia_porcellus
ENSUAMG00000021346	RBM47	99	67.116	ENSCCAG00000024397	-	99	65.936	Cebus_capucinus
ENSUAMG00000021346	RBM47	100	96.134	ENSCCAG00000030129	-	100	96.134	Cebus_capucinus
ENSUAMG00000021346	RBM47	100	96.970	ENSCATG00000042064	RBM47	100	96.970	Cercocebus_atys
ENSUAMG00000021346	RBM47	100	94.444	ENSCLAG00000001684	RBM47	100	96.203	Chinchilla_lanigera
ENSUAMG00000021346	RBM47	100	96.970	ENSCSAG00000017060	RBM47	100	96.970	Chlorocebus_sabaeus
ENSUAMG00000021346	RBM47	88	89.640	ENSCHOG00000011731	RBM47	88	88.608	Choloepus_hoffmanni
ENSUAMG00000021346	RBM47	100	89.482	ENSCPBG00000013831	RBM47	100	89.983	Chrysemys_picta_bellii
ENSUAMG00000021346	RBM47	100	96.801	ENSCANG00000019997	RBM47	100	96.801	Colobus_angolensis_palliatus
ENSUAMG00000021346	RBM47	100	64.901	ENSCGRG00001020102	-	100	71.912	Cricetulus_griseus_chok1gshd
ENSUAMG00000021346	RBM47	100	93.423	ENSCGRG00001000623	-	100	93.423	Cricetulus_griseus_chok1gshd
ENSUAMG00000021346	RBM47	100	92.580	ENSCGRG00000007762	-	100	93.038	Cricetulus_griseus_crigri
ENSUAMG00000021346	RBM47	100	64.570	ENSCGRG00000014760	-	100	71.574	Cricetulus_griseus_crigri
ENSUAMG00000021346	RBM47	100	74.833	ENSCSEG00000004545	rbm47	100	74.167	Cynoglossus_semilaevis
ENSUAMG00000021346	RBM47	100	75.544	ENSCVAG00000020144	rbm47	93	84.463	Cyprinodon_variegatus
ENSUAMG00000021346	RBM47	100	76.355	ENSDARG00000061985	rbm47	95	77.778	Danio_rerio
ENSUAMG00000021346	RBM47	100	95.447	ENSDNOG00000046854	RBM47	100	95.447	Dasypus_novemcinctus
ENSUAMG00000021346	RBM47	100	95.142	ENSDORG00000010144	Rbm47	100	95.142	Dipodomys_ordii
ENSUAMG00000021346	RBM47	100	95.142	ENSETEG00000009194	RBM47	100	95.142	Echinops_telfairi
ENSUAMG00000021346	RBM47	99	57.261	ENSEBUG00000011912	rbm47	95	59.619	Eptatretus_burgeri
ENSUAMG00000021346	RBM47	100	97.643	ENSEASG00005008443	RBM47	100	97.643	Equus_asinus_asinus
ENSUAMG00000021346	RBM47	100	97.643	ENSECAG00000004400	RBM47	100	97.643	Equus_caballus
ENSUAMG00000021346	RBM47	75	97.835	ENSEEUG00000001194	RBM47	75	97.835	Erinaceus_europaeus
ENSUAMG00000021346	RBM47	99	74.667	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSUAMG00000021346	RBM47	100	97.639	ENSFCAG00000012399	RBM47	100	97.639	Felis_catus
ENSUAMG00000021346	RBM47	100	90.604	ENSFALG00000002861	RBM47	100	90.772	Ficedula_albicollis
ENSUAMG00000021346	RBM47	100	93.098	ENSFDAG00000016326	RBM47	100	93.266	Fukomys_damarensis
ENSUAMG00000021346	RBM47	100	76.756	ENSFHEG00000007938	rbm47	100	75.084	Fundulus_heteroclitus
ENSUAMG00000021346	RBM47	100	74.634	ENSGMOG00000014802	rbm47	94	76.562	Gadus_morhua
ENSUAMG00000021346	RBM47	64	92.021	ENSGALG00000014267	RBM47	99	92.021	Gallus_gallus
ENSUAMG00000021346	RBM47	64	83.200	ENSGAFG00000020571	rbm47	98	80.533	Gambusia_affinis
ENSUAMG00000021346	RBM47	100	73.941	ENSGACG00000016223	rbm47	93	82.535	Gasterosteus_aculeatus
ENSUAMG00000021346	RBM47	100	89.649	ENSGAGG00000020051	RBM47	100	90.150	Gopherus_agassizii
ENSUAMG00000021346	RBM47	100	96.970	ENSGGOG00000001367	RBM47	100	96.970	Gorilla_gorilla
ENSUAMG00000021346	RBM47	100	76.144	ENSHBUG00000003520	rbm47	94	84.789	Haplochromis_burtoni
ENSUAMG00000021346	RBM47	84	85.600	ENSHGLG00000016914	RBM47	100	94.937	Heterocephalus_glaber_female
ENSUAMG00000021346	RBM47	100	93.412	ENSHGLG00100014028	-	100	94.937	Heterocephalus_glaber_male
ENSUAMG00000021346	RBM47	100	84.915	ENSHGLG00100003071	-	100	84.915	Heterocephalus_glaber_male
ENSUAMG00000021346	RBM47	99	76.461	ENSHCOG00000002074	rbm47	93	85.634	Hippocampus_comes
ENSUAMG00000021346	RBM47	100	77.554	ENSIPUG00000004743	rbm47	97	78.534	Ictalurus_punctatus
ENSUAMG00000021346	RBM47	100	96.639	ENSSTOG00000004727	RBM47	100	96.639	Ictidomys_tridecemlineatus
ENSUAMG00000021346	RBM47	100	95.791	ENSJJAG00000013823	Rbm47	100	95.791	Jaculus_jaculus
ENSUAMG00000021346	RBM47	100	77.833	ENSKMAG00000000084	rbm47	100	76.795	Kryptolebias_marmoratus
ENSUAMG00000021346	RBM47	100	76.254	ENSLBEG00000008436	rbm47	93	83.662	Labrus_bergylta
ENSUAMG00000021346	RBM47	100	84.757	ENSLACG00000007196	RBM47	100	83.752	Latimeria_chalumnae
ENSUAMG00000021346	RBM47	100	81.575	ENSLOCG00000012966	rbm47	95	80.235	Lepisosteus_oculatus
ENSUAMG00000021346	RBM47	100	95.623	ENSLAFG00000011998	RBM47	100	95.623	Loxodonta_africana
ENSUAMG00000021346	RBM47	100	96.970	ENSMFAG00000037967	RBM47	100	96.970	Macaca_fascicularis
ENSUAMG00000021346	RBM47	100	96.970	ENSMMUG00000012036	RBM47	100	98.446	Macaca_mulatta
ENSUAMG00000021346	RBM47	100	96.970	ENSMNEG00000040774	RBM47	100	96.970	Macaca_nemestrina
ENSUAMG00000021346	RBM47	100	98.730	ENSMLEG00000041432	RBM47	100	98.730	Mandrillus_leucophaeus
ENSUAMG00000021346	RBM47	100	75.941	ENSMAMG00000019143	rbm47	94	81.067	Mastacembelus_armatus
ENSUAMG00000021346	RBM47	100	76.230	ENSMZEG00005023659	rbm47	95	78.547	Maylandia_zebra
ENSUAMG00000021346	RBM47	100	89.649	ENSMGAG00000012226	RBM47	100	89.816	Meleagris_gallopavo
ENSUAMG00000021346	RBM47	100	94.098	ENSMAUG00000006493	Rbm47	100	93.929	Mesocricetus_auratus
ENSUAMG00000021346	RBM47	100	89.376	ENSMICG00000026417	RBM47	100	91.200	Microcebus_murinus
ENSUAMG00000021346	RBM47	100	94.764	ENSMOCG00000021170	Rbm47	100	94.595	Microtus_ochrogaster
ENSUAMG00000021346	RBM47	100	76.471	ENSMMOG00000007260	rbm47	95	78.411	Mola_mola
ENSUAMG00000021346	RBM47	100	91.400	ENSMODG00000007003	RBM47	100	91.400	Monodelphis_domestica
ENSUAMG00000021346	RBM47	52	82.051	ENSMODG00000015426	-	97	79.743	Monodelphis_domestica
ENSUAMG00000021346	RBM47	100	81.788	ENSMODG00000020561	-	97	82.199	Monodelphis_domestica
ENSUAMG00000021346	RBM47	100	76.461	ENSMALG00000005167	rbm47	94	84.225	Monopterus_albus
ENSUAMG00000021346	RBM47	100	93.919	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.750	Mus_caroli
ENSUAMG00000021346	RBM47	100	94.257	ENSMUSG00000070780	Rbm47	100	94.088	Mus_musculus
ENSUAMG00000021346	RBM47	100	94.257	MGP_PahariEiJ_G0017040	Rbm47	100	94.088	Mus_pahari
ENSUAMG00000021346	RBM47	100	93.919	MGP_SPRETEiJ_G0028253	Rbm47	100	93.750	Mus_spretus
ENSUAMG00000021346	RBM47	100	98.816	ENSMPUG00000006177	RBM47	94	98.816	Mustela_putorius_furo
ENSUAMG00000021346	RBM47	100	93.603	ENSMLUG00000000889	RBM47	100	93.434	Myotis_lucifugus
ENSUAMG00000021346	RBM47	100	94.604	ENSNGAG00000003325	Rbm47	100	94.435	Nannospalax_galili
ENSUAMG00000021346	RBM47	100	76.432	ENSNBRG00000015092	rbm47	95	78.756	Neolamprologus_brichardi
ENSUAMG00000021346	RBM47	100	96.633	ENSNLEG00000017151	RBM47	100	96.633	Nomascus_leucogenys
ENSUAMG00000021346	RBM47	72	87.119	ENSMEUG00000009516	-	99	87.500	Notamacropus_eugenii
ENSUAMG00000021346	RBM47	75	96.680	ENSOPRG00000016507	-	75	96.680	Ochotona_princeps
ENSUAMG00000021346	RBM47	100	96.128	ENSODEG00000004873	RBM47	100	96.128	Octodon_degus
ENSUAMG00000021346	RBM47	100	75.693	ENSONIG00000009061	rbm47	94	77.163	Oreochromis_niloticus
ENSUAMG00000021346	RBM47	100	87.312	ENSOANG00000008978	RBM47	100	88.147	Ornithorhynchus_anatinus
ENSUAMG00000021346	RBM47	100	95.791	ENSOCUG00000012034	RBM47	100	95.791	Oryctolagus_cuniculus
ENSUAMG00000021346	RBM47	100	77.129	ENSORLG00000005847	rbm47	94	83.662	Oryzias_latipes
ENSUAMG00000021346	RBM47	100	77.295	ENSORLG00020005154	rbm47	94	83.662	Oryzias_latipes_hni
ENSUAMG00000021346	RBM47	100	77.629	ENSORLG00015000066	rbm47	94	83.944	Oryzias_latipes_hsok
ENSUAMG00000021346	RBM47	100	78.763	ENSOMEG00000010730	rbm47	100	76.589	Oryzias_melastigma
ENSUAMG00000021346	RBM47	100	87.817	ENSOGAG00000025193	-	100	87.817	Otolemur_garnettii
ENSUAMG00000021346	RBM47	100	97.631	ENSOGAG00000029367	-	100	97.631	Otolemur_garnettii
ENSUAMG00000021346	RBM47	100	89.899	ENSOARG00000012711	RBM47	100	89.899	Ovis_aries
ENSUAMG00000021346	RBM47	100	96.801	ENSPPAG00000029763	RBM47	100	96.801	Pan_paniscus
ENSUAMG00000021346	RBM47	100	94.266	ENSPPRG00000012873	RBM47	100	94.266	Panthera_pardus
ENSUAMG00000021346	RBM47	85	94.012	ENSPTIG00000017046	RBM47	100	94.012	Panthera_tigris_altaica
ENSUAMG00000021346	RBM47	100	96.970	ENSPTRG00000016006	RBM47	100	96.970	Pan_troglodytes
ENSUAMG00000021346	RBM47	100	96.970	ENSPANG00000005980	RBM47	100	96.970	Papio_anubis
ENSUAMG00000021346	RBM47	96	77.739	ENSPKIG00000005037	rbm47	95	77.043	Paramormyrops_kingsleyae
ENSUAMG00000021346	RBM47	96	75.563	ENSPKIG00000013431	RBM47	92	85.593	Paramormyrops_kingsleyae
ENSUAMG00000021346	RBM47	90	91.149	ENSPSIG00000017516	RBM47	97	90.960	Pelodiscus_sinensis
ENSUAMG00000021346	RBM47	100	75.084	ENSPMGG00000018540	rbm47	100	74.749	Periophthalmus_magnuspinnatus
ENSUAMG00000021346	RBM47	100	94.604	ENSPEMG00000011088	Rbm47	100	94.941	Peromyscus_maniculatus_bairdii
ENSUAMG00000021346	RBM47	96	79.896	ENSPFOG00000007997	rbm47	94	78.336	Poecilia_formosa
ENSUAMG00000021346	RBM47	96	79.549	ENSPLAG00000002072	rbm47	100	80.267	Poecilia_latipinna
ENSUAMG00000021346	RBM47	100	78.595	ENSPMEG00000017492	rbm47	93	83.898	Poecilia_mexicana
ENSUAMG00000021346	RBM47	96	79.723	ENSPREG00000008456	rbm47	100	80.533	Poecilia_reticulata
ENSUAMG00000021346	RBM47	98	82.741	ENSPPYG00000014688	RBM47	98	82.646	Pongo_abelii
ENSUAMG00000021346	RBM47	81	97.000	ENSPCAG00000011879	RBM47	81	97.000	Procavia_capensis
ENSUAMG00000021346	RBM47	100	93.570	ENSPCOG00000023451	RBM47	100	93.570	Propithecus_coquereli
ENSUAMG00000021346	RBM47	100	95.966	ENSPVAG00000003812	RBM47	100	95.966	Pteropus_vampyrus
ENSUAMG00000021346	RBM47	100	76.183	ENSPNYG00000022868	rbm47	95	78.485	Pundamilia_nyererei
ENSUAMG00000021346	RBM47	100	75.817	ENSPNAG00000007940	rbm47	95	77.414	Pygocentrus_nattereri
ENSUAMG00000021346	RBM47	100	94.426	ENSRNOG00000002408	Rbm47	100	94.257	Rattus_norvegicus
ENSUAMG00000021346	RBM47	100	96.801	ENSRBIG00000039601	RBM47	100	96.801	Rhinopithecus_bieti
ENSUAMG00000021346	RBM47	100	96.801	ENSRROG00000044696	RBM47	100	96.801	Rhinopithecus_roxellana
ENSUAMG00000021346	RBM47	100	91.737	ENSSBOG00000028475	RBM47	100	96.901	Saimiri_boliviensis_boliviensis
ENSUAMG00000021346	RBM47	100	91.737	ENSSHAG00000017576	RBM47	100	91.906	Sarcophilus_harrisii
ENSUAMG00000021346	RBM47	100	74.791	ENSSFOG00015024101	RBM47	97	76.166	Scleropages_formosus
ENSUAMG00000021346	RBM47	100	73.841	ENSSFOG00015012445	rbm47	94	74.956	Scleropages_formosus
ENSUAMG00000021346	RBM47	100	74.715	ENSSMAG00000009744	rbm47	94	82.254	Scophthalmus_maximus
ENSUAMG00000021346	RBM47	100	78.094	ENSSDUG00000022684	rbm47	100	76.756	Seriola_dumerili
ENSUAMG00000021346	RBM47	100	78.428	ENSSLDG00000003109	rbm47	100	76.756	Seriola_lalandi_dorsalis
ENSUAMG00000021346	RBM47	84	96.205	ENSSARG00000001735	RBM47	84	96.205	Sorex_araneus
ENSUAMG00000021346	RBM47	100	87.102	ENSSPUG00000007515	RBM47	100	89.333	Sphenodon_punctatus
ENSUAMG00000021346	RBM47	100	78.428	ENSSPAG00000001257	rbm47	93	85.070	Stegastes_partitus
ENSUAMG00000021346	RBM47	100	97.306	ENSSSCG00000008796	RBM47	100	97.306	Sus_scrofa
ENSUAMG00000021346	RBM47	100	90.268	ENSTGUG00000008705	RBM47	100	90.268	Taeniopygia_guttata
ENSUAMG00000021346	RBM47	100	76.087	ENSTRUG00000014050	rbm47	100	75.251	Takifugu_rubripes
ENSUAMG00000021346	RBM47	100	75.490	ENSTNIG00000006127	rbm47	95	77.855	Tetraodon_nigroviridis
ENSUAMG00000021346	RBM47	76	93.421	ENSTBEG00000001607	RBM47	76	93.421	Tupaia_belangeri
ENSUAMG00000021346	RBM47	100	96.959	ENSTTRG00000002839	RBM47	100	96.959	Tursiops_truncatus
ENSUAMG00000021346	RBM47	57	98.630	ENSVPAG00000000641	-	57	98.630	Vicugna_pacos
ENSUAMG00000021346	RBM47	96	95.965	ENSVVUG00000014774	RBM47	100	94.949	Vulpes_vulpes
ENSUAMG00000021346	RBM47	100	86.172	ENSXETG00000012802	rbm47	100	86.003	Xenopus_tropicalis
ENSUAMG00000021346	RBM47	88	82.933	ENSXCOG00000000780	rbm47	100	80.267	Xiphophorus_couchianus
ENSUAMG00000021346	RBM47	100	76.589	ENSXMAG00000009874	rbm47	93	83.616	Xiphophorus_maculatus