EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000021669 (Gene tree)
Gene ID: -
Gene Symbol: GTSF1
Alias: FAM112B|FLJ32942
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 10173 bases
Position: chrLZNR01001819.1:19650-29822
Accession: 26565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000028039	zf-U11-48K	PF05253.12	5.8e-20	1	2
ENSUAMP00000028039	zf-U11-48K	PF05253.12	5.8e-20	2	2
ENSUAMP00000028037	zf-U11-48K	PF05253.12	7.2e-20	1	2
ENSUAMP00000028037	zf-U11-48K	PF05253.12	7.2e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000031320	GTSF1-201	561	-	ENSUAMP00000028037	186 (aa)	-	-
ENSUAMT00000031322	GTSF1-202	525	-	ENSUAMP00000028039	174 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000021669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000021669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000021669	GTSF1	60	33.028	ENSUAMG00000021668	-	94	33.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000021669	GTSF1	100	92.045	ENSG00000170627	GTSF1	100	93.413	Homo_sapiens
ENSUAMG00000021669	GTSF1	84	45.638	ENSAPOG00000022724	-	95	46.622	Acanthochromis_polyacanthus
ENSUAMG00000021669	GTSF1	91	98.742	ENSAMEG00000000939	GTSF1	96	99.383	Ailuropoda_melanoleuca
ENSUAMG00000021669	GTSF1	84	44.295	ENSAOCG00000022214	-	72	43.312	Amphiprion_ocellaris
ENSUAMG00000021669	GTSF1	72	61.111	ENSAPLG00000004814	GTSF1	95	59.690	Anas_platyrhynchos
ENSUAMG00000021669	GTSF1	67	49.138	ENSACAG00000029590	-	95	49.138	Anolis_carolinensis
ENSUAMG00000021669	GTSF1	93	61.728	ENSACAG00000014260	-	94	61.728	Anolis_carolinensis
ENSUAMG00000021669	GTSF1	97	91.765	ENSANAG00000024529	GTSF1	100	92.814	Aotus_nancymaae
ENSUAMG00000021669	GTSF1	94	96.951	ENSBTAG00000018085	GTSF1	100	97.605	Bos_taurus
ENSUAMG00000021669	GTSF1	95	87.006	ENSCJAG00000039915	-	94	87.006	Callithrix_jacchus
ENSUAMG00000021669	GTSF1	94	92.683	ENSCJAG00000018968	-	100	93.413	Callithrix_jacchus
ENSUAMG00000021669	GTSF1	94	98.780	ENSCAFG00000006465	-	100	99.401	Canis_familiaris
ENSUAMG00000021669	GTSF1	100	98.276	ENSCAFG00020020373	-	100	98.276	Canis_lupus_dingo
ENSUAMG00000021669	GTSF1	92	95.625	ENSCHIG00000012215	-	95	96.319	Capra_hircus
ENSUAMG00000021669	GTSF1	94	95.122	ENSTSYG00000004679	-	100	95.783	Carlito_syrichta
ENSUAMG00000021669	GTSF1	94	76.829	ENSTSYG00000035266	-	100	77.246	Carlito_syrichta
ENSUAMG00000021669	GTSF1	94	96.341	ENSCPOG00000008743	GTSF1	100	97.006	Cavia_porcellus
ENSUAMG00000021669	GTSF1	97	69.412	ENSCCAG00000032808	GTSF1	100	68.944	Cebus_capucinus
ENSUAMG00000021669	GTSF1	94	92.683	ENSCATG00000036328	GTSF1	100	93.413	Cercocebus_atys
ENSUAMG00000021669	GTSF1	94	95.732	ENSCLAG00000012811	GTSF1	100	96.407	Chinchilla_lanigera
ENSUAMG00000021669	GTSF1	90	92.994	ENSCSAG00000005394	GTSF1	99	92.994	Chlorocebus_sabaeus
ENSUAMG00000021669	GTSF1	94	96.951	ENSCHOG00000001659	GTSF1	100	97.605	Choloepus_hoffmanni
ENSUAMG00000021669	GTSF1	93	57.669	ENSCPBG00000024905	-	89	57.669	Chrysemys_picta_bellii
ENSUAMG00000021669	GTSF1	95	70.659	ENSCPBG00000005134	-	77	67.797	Chrysemys_picta_bellii
ENSUAMG00000021669	GTSF1	94	87.195	ENSCANG00000031776	-	100	88.024	Colobus_angolensis_palliatus
ENSUAMG00000021669	GTSF1	94	91.463	ENSCANG00000033118	GTSF1	100	92.216	Colobus_angolensis_palliatus
ENSUAMG00000021669	GTSF1	94	97.561	ENSCGRG00001013814	Gtsf1	100	98.204	Cricetulus_griseus_chok1gshd
ENSUAMG00000021669	GTSF1	94	97.561	ENSCGRG00000007733	Gtsf1	100	98.204	Cricetulus_griseus_crigri
ENSUAMG00000021669	GTSF1	90	96.815	ENSDNOG00000001438	-	90	96.815	Dasypus_novemcinctus
ENSUAMG00000021669	GTSF1	94	97.561	ENSDORG00000003228	Gtsf1	100	98.204	Dipodomys_ordii
ENSUAMG00000021669	GTSF1	94	95.122	ENSETEG00000009310	GTSF1	100	95.808	Echinops_telfairi
ENSUAMG00000021669	GTSF1	100	95.213	ENSEASG00005010260	GTSF1	100	95.213	Equus_asinus_asinus
ENSUAMG00000021669	GTSF1	94	97.561	ENSECAG00000013618	GTSF1	100	98.204	Equus_caballus
ENSUAMG00000021669	GTSF1	94	98.780	ENSEEUG00000005185	GTSF1	100	99.401	Erinaceus_europaeus
ENSUAMG00000021669	GTSF1	99	68.108	ENSFCAG00000023672	-	99	68.108	Felis_catus
ENSUAMG00000021669	GTSF1	94	98.780	ENSFCAG00000010156	-	100	99.401	Felis_catus
ENSUAMG00000021669	GTSF1	72	53.968	ENSFALG00000007613	-	100	53.968	Ficedula_albicollis
ENSUAMG00000021669	GTSF1	94	91.463	ENSFDAG00000009383	GTSF1	100	92.216	Fukomys_damarensis
ENSUAMG00000021669	GTSF1	92	54.658	ENSGALG00000001109	GTSF1	99	54.658	Gallus_gallus
ENSUAMG00000021669	GTSF1	84	49.660	ENSGACG00000010783	-	80	49.660	Gasterosteus_aculeatus
ENSUAMG00000021669	GTSF1	64	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
ENSUAMG00000021669	GTSF1	100	62.500	ENSGAGG00000011062	GTSF1	91	62.500	Gopherus_agassizii
ENSUAMG00000021669	GTSF1	60	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
ENSUAMG00000021669	GTSF1	94	92.683	ENSGGOG00000016063	GTSF1	100	93.413	Gorilla_gorilla
ENSUAMG00000021669	GTSF1	94	93.902	ENSHGLG00000002436	GTSF1	100	94.611	Heterocephalus_glaber_female
ENSUAMG00000021669	GTSF1	94	93.902	ENSHGLG00100017301	GTSF1	100	94.611	Heterocephalus_glaber_male
ENSUAMG00000021669	GTSF1	92	47.531	ENSIPUG00000002483	-	84	47.799	Ictalurus_punctatus
ENSUAMG00000021669	GTSF1	94	98.171	ENSSTOG00000025170	GTSF1	100	98.802	Ictidomys_tridecemlineatus
ENSUAMG00000021669	GTSF1	94	86.585	ENSJJAG00000017442	-	100	86.826	Jaculus_jaculus
ENSUAMG00000021669	GTSF1	94	92.683	ENSJJAG00000003323	-	100	92.814	Jaculus_jaculus
ENSUAMG00000021669	GTSF1	84	48.980	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
ENSUAMG00000021669	GTSF1	89	61.688	ENSLACG00000008870	GTSF1	82	61.392	Latimeria_chalumnae
ENSUAMG00000021669	GTSF1	91	98.742	ENSLAFG00000016318	GTSF1	97	99.383	Loxodonta_africana
ENSUAMG00000021669	GTSF1	94	92.683	ENSMFAG00000041178	GTSF1	100	93.413	Macaca_fascicularis
ENSUAMG00000021669	GTSF1	100	92.045	ENSMMUG00000003758	GTSF1	100	93.413	Macaca_mulatta
ENSUAMG00000021669	GTSF1	94	92.683	ENSMNEG00000036779	GTSF1	100	93.413	Macaca_nemestrina
ENSUAMG00000021669	GTSF1	94	92.073	ENSMLEG00000028375	GTSF1	100	92.814	Mandrillus_leucophaeus
ENSUAMG00000021669	GTSF1	76	56.716	ENSMGAG00000000685	GTSF1	95	56.716	Meleagris_gallopavo
ENSUAMG00000021669	GTSF1	94	72.561	ENSMAUG00000018746	Gtsf1	99	73.653	Mesocricetus_auratus
ENSUAMG00000021669	GTSF1	94	98.780	ENSMICG00000008444	-	100	99.401	Microcebus_murinus
ENSUAMG00000021669	GTSF1	94	96.951	ENSMOCG00000018889	Gtsf1	100	97.605	Microtus_ochrogaster
ENSUAMG00000021669	GTSF1	94	86.585	ENSMODG00000019422	GTSF1	100	87.425	Monodelphis_domestica
ENSUAMG00000021669	GTSF1	94	96.951	MGP_CAROLIEiJ_G0020379	Gtsf1	100	97.638	Mus_caroli
ENSUAMG00000021669	GTSF1	94	96.951	ENSMUSG00000022487	Gtsf1	100	97.638	Mus_musculus
ENSUAMG00000021669	GTSF1	94	96.341	MGP_PahariEiJ_G0020378	Gtsf1	100	97.006	Mus_pahari
ENSUAMG00000021669	GTSF1	94	96.951	MGP_SPRETEiJ_G0021272	Gtsf1	100	97.638	Mus_spretus
ENSUAMG00000021669	GTSF1	94	89.024	ENSMPUG00000019140	-	100	89.820	Mustela_putorius_furo
ENSUAMG00000021669	GTSF1	93	98.758	ENSMPUG00000005669	-	98	99.390	Mustela_putorius_furo
ENSUAMG00000021669	GTSF1	94	97.561	ENSMPUG00000019323	-	100	98.204	Mustela_putorius_furo
ENSUAMG00000021669	GTSF1	94	93.902	ENSMLUG00000026557	-	100	94.611	Myotis_lucifugus
ENSUAMG00000021669	GTSF1	94	96.951	ENSMLUG00000012961	-	100	97.605	Myotis_lucifugus
ENSUAMG00000021669	GTSF1	94	96.341	ENSNGAG00000014213	Gtsf1	100	97.006	Nannospalax_galili
ENSUAMG00000021669	GTSF1	94	92.073	ENSNLEG00000017635	GTSF1	100	92.814	Nomascus_leucogenys
ENSUAMG00000021669	GTSF1	94	76.829	ENSMEUG00000016206	GTSF1	100	77.246	Notamacropus_eugenii
ENSUAMG00000021669	GTSF1	94	68.902	ENSOPRG00000017277	GTSF1	100	70.060	Ochotona_princeps
ENSUAMG00000021669	GTSF1	94	96.341	ENSODEG00000014220	GTSF1	100	97.006	Octodon_degus
ENSUAMG00000021669	GTSF1	91	70.440	ENSOANG00000011386	GTSF1	99	69.091	Ornithorhynchus_anatinus
ENSUAMG00000021669	GTSF1	94	96.951	ENSOCUG00000024495	GTSF1	100	97.605	Oryctolagus_cuniculus
ENSUAMG00000021669	GTSF1	65	51.327	ENSORLG00015005017	-	70	51.327	Oryzias_latipes_hsok
ENSUAMG00000021669	GTSF1	97	94.706	ENSOGAG00000017227	GTSF1	100	94.706	Otolemur_garnettii
ENSUAMG00000021669	GTSF1	94	97.561	ENSOARG00000016162	GTSF1	100	98.204	Ovis_aries
ENSUAMG00000021669	GTSF1	94	92.683	ENSPPAG00000028506	GTSF1	100	93.413	Pan_paniscus
ENSUAMG00000021669	GTSF1	94	98.780	ENSPPRG00000004344	-	100	99.401	Panthera_pardus
ENSUAMG00000021669	GTSF1	99	85.143	ENSPPRG00000017612	-	96	88.136	Panthera_pardus
ENSUAMG00000021669	GTSF1	99	85.714	ENSPTIG00000010868	-	96	88.701	Panthera_tigris_altaica
ENSUAMG00000021669	GTSF1	94	98.780	ENSPTIG00000020415	-	100	99.401	Panthera_tigris_altaica
ENSUAMG00000021669	GTSF1	100	92.045	ENSPTRG00000005041	GTSF1	100	93.413	Pan_troglodytes
ENSUAMG00000021669	GTSF1	94	92.683	ENSPANG00000020579	GTSF1	100	93.413	Papio_anubis
ENSUAMG00000021669	GTSF1	94	68.485	ENSPSIG00000009968	GTSF1	85	66.474	Pelodiscus_sinensis
ENSUAMG00000021669	GTSF1	80	44.966	ENSPSIG00000009839	-	93	44.966	Pelodiscus_sinensis
ENSUAMG00000021669	GTSF1	94	97.561	ENSPEMG00000009595	Gtsf1	100	98.204	Peromyscus_maniculatus_bairdii
ENSUAMG00000021669	GTSF1	94	82.927	ENSPCIG00000006731	GTSF1	100	83.832	Phascolarctos_cinereus
ENSUAMG00000021669	GTSF1	94	92.683	ENSPPYG00000004605	GTSF1	100	93.413	Pongo_abelii
ENSUAMG00000021669	GTSF1	94	98.171	ENSPCOG00000016907	-	100	98.802	Propithecus_coquereli
ENSUAMG00000021669	GTSF1	93	84.337	ENSPCOG00000015201	-	99	84.615	Propithecus_coquereli
ENSUAMG00000021669	GTSF1	94	98.780	ENSPVAG00000000333	GTSF1	100	99.401	Pteropus_vampyrus
ENSUAMG00000021669	GTSF1	86	48.026	ENSPNAG00000005737	-	82	48.026	Pygocentrus_nattereri
ENSUAMG00000021669	GTSF1	94	96.951	ENSRNOG00000036831	Gtsf1	94	93.785	Rattus_norvegicus
ENSUAMG00000021669	GTSF1	94	92.073	ENSRBIG00000043438	-	100	92.814	Rhinopithecus_bieti
ENSUAMG00000021669	GTSF1	96	84.358	ENSRBIG00000039916	-	95	84.358	Rhinopithecus_bieti
ENSUAMG00000021669	GTSF1	94	92.683	ENSRROG00000008137	GTSF1	100	93.413	Rhinopithecus_roxellana
ENSUAMG00000021669	GTSF1	94	93.293	ENSSBOG00000029460	GTSF1	100	94.012	Saimiri_boliviensis_boliviensis
ENSUAMG00000021669	GTSF1	94	86.585	ENSSHAG00000011633	GTSF1	100	87.425	Sarcophilus_harrisii
ENSUAMG00000021669	GTSF1	75	99.231	ENSSARG00000004928	GTSF1	78	99.231	Sorex_araneus
ENSUAMG00000021669	GTSF1	94	51.534	ENSSPUG00000010064	GTSF1	93	71.818	Sphenodon_punctatus
ENSUAMG00000021669	GTSF1	94	98.171	ENSSSCG00000026333	GTSF1	100	98.802	Sus_scrofa
ENSUAMG00000021669	GTSF1	73	56.250	ENSTGUG00000002008	-	100	56.250	Taeniopygia_guttata
ENSUAMG00000021669	GTSF1	91	96.203	ENSTBEG00000006154	GTSF1	100	96.894	Tupaia_belangeri
ENSUAMG00000021669	GTSF1	94	95.732	ENSTTRG00000004470	GTSF1	100	96.407	Tursiops_truncatus
ENSUAMG00000021669	GTSF1	94	99.390	ENSUMAG00000011279	GTSF1	100	100.000	Ursus_maritimus
ENSUAMG00000021669	GTSF1	94	96.951	ENSVPAG00000007016	GTSF1	100	97.605	Vicugna_pacos
ENSUAMG00000021669	GTSF1	96	97.191	ENSVVUG00000023687	-	90	97.191	Vulpes_vulpes
ENSUAMG00000021669	GTSF1	93	64.596	ENSXETG00000033546	gtsf1	72	63.804	Xenopus_tropicalis