EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000021991 (Gene tree)
Gene ID: -
Gene Symbol: CHD1L
Alias: ALC1
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 72261 bases
Position: chrLZNR01004922.1:104467-176727
Accession: 1916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029018	ResIII	PF04851.15	4.7e-12	1	1
ENSUAMP00000028976	ResIII	PF04851.15	5.1e-12	1	1
ENSUAMP00000028986	ResIII	PF04851.15	5.7e-12	1	1
ENSUAMP00000028919	ResIII	PF04851.15	6.1e-12	1	1
ENSUAMP00000028920	ResIII	PF04851.15	6.1e-12	1	1
ENSUAMP00000028983	ResIII	PF04851.15	6.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000032360	CHD1L-205	2697	-	ENSUAMP00000028986	898 (aa)	-	-
ENSUAMT00000032357	CHD1L-204	2703	-	ENSUAMP00000028983	900 (aa)	-	-
ENSUAMT00000032350	CHD1L-203	2670	-	ENSUAMP00000028976	889 (aa)	-	-
ENSUAMT00000032290	CHD1L-201	2688	-	ENSUAMP00000028919	895 (aa)	-	-
ENSUAMT00000032397	CHD1L-206	2595	-	ENSUAMP00000029018	864 (aa)	-	-
ENSUAMT00000032427	CHD1L-207	2559	-	ENSUAMP00000029046	852 (aa)	-	-
ENSUAMT00000032291	CHD1L-202	2691	-	ENSUAMP00000028920	896 (aa)	-	-
ENSUAMT00000032438	CHD1L-208	2373	-	ENSUAMP00000029056	790 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000021991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000021991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000021991	CHD1L	63	43.409	ENSUAMG00000023495	SMARCA5	54	42.882
ENSUAMG00000021991	CHD1L	57	41.231	ENSUAMG00000004198	CHD8	52	41.495
ENSUAMG00000021991	CHD1L	53	39.963	ENSUAMG00000003343	HELLS	67	39.595
ENSUAMG00000021991	CHD1L	53	36.015	ENSUAMG00000022262	SMARCAD1	56	35.441
ENSUAMG00000021991	CHD1L	57	42.831	ENSUAMG00000024036	CHD6	71	40.306
ENSUAMG00000021991	CHD1L	63	44.133	ENSUAMG00000020201	SMARCA1	55	42.589

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000021991	CHD1L	99	90.045	ENSG00000131778	CHD1L	100	89.333	Homo_sapiens
ENSUAMG00000021991	CHD1L	96	65.398	ENSAPOG00000001539	chd1l	99	64.424	Acanthochromis_polyacanthus
ENSUAMG00000021991	CHD1L	100	98.107	ENSAMEG00000017063	CHD1L	100	98.107	Ailuropoda_melanoleuca
ENSUAMG00000021991	CHD1L	95	65.680	ENSACIG00000001164	chd1l	97	65.811	Amphilophus_citrinellus
ENSUAMG00000021991	CHD1L	98	63.946	ENSAOCG00000014510	chd1l	87	64.221	Amphiprion_ocellaris
ENSUAMG00000021991	CHD1L	97	61.882	ENSAPEG00000017450	chd1l	97	61.556	Amphiprion_percula
ENSUAMG00000021991	CHD1L	98	61.775	ENSAPEG00000017573	chd1l	96	61.889	Amphiprion_percula
ENSUAMG00000021991	CHD1L	98	64.181	ENSATEG00000013058	chd1l	93	65.856	Anabas_testudineus
ENSUAMG00000021991	CHD1L	98	72.738	ENSAPLG00000009976	CHD1L	99	72.525	Anas_platyrhynchos
ENSUAMG00000021991	CHD1L	97	68.645	ENSACAG00000017686	CHD1L	98	68.533	Anolis_carolinensis
ENSUAMG00000021991	CHD1L	98	89.605	ENSANAG00000024347	CHD1L	99	88.976	Aotus_nancymaae
ENSUAMG00000021991	CHD1L	97	64.465	ENSACLG00000019304	chd1l	97	64.326	Astatotilapia_calliptera
ENSUAMG00000021991	CHD1L	97	59.494	ENSAMXG00000012367	chd1l	86	59.379	Astyanax_mexicanus
ENSUAMG00000021991	CHD1L	99	90.293	ENSBTAG00000020831	CHD1L	99	90.000	Bos_taurus
ENSUAMG00000021991	CHD1L	98	89.468	ENSCJAG00000002406	CHD1L	99	88.839	Callithrix_jacchus
ENSUAMG00000021991	CHD1L	99	89.775	ENSCAFG00000010944	CHD1L	99	89.551	Canis_familiaris
ENSUAMG00000021991	CHD1L	98	91.685	ENSCAFG00020020121	CHD1L	99	91.461	Canis_lupus_dingo
ENSUAMG00000021991	CHD1L	99	89.213	ENSCHIG00000013871	CHD1L	99	88.989	Capra_hircus
ENSUAMG00000021991	CHD1L	94	91.190	ENSTSYG00000003005	CHD1L	100	90.387	Carlito_syrichta
ENSUAMG00000021991	CHD1L	98	85.747	ENSCPOG00000009000	CHD1L	99	85.410	Cavia_porcellus
ENSUAMG00000021991	CHD1L	98	86.183	ENSCCAG00000036079	CHD1L	99	85.603	Cebus_capucinus
ENSUAMG00000021991	CHD1L	98	90.444	ENSCATG00000031044	CHD1L	100	89.556	Cercocebus_atys
ENSUAMG00000021991	CHD1L	98	87.699	ENSCLAG00000000880	CHD1L	99	87.585	Chinchilla_lanigera
ENSUAMG00000021991	CHD1L	98	90.330	ENSCSAG00000018386	CHD1L	100	89.333	Chlorocebus_sabaeus
ENSUAMG00000021991	CHD1L	97	75.917	ENSCPBG00000002600	CHD1L	99	75.113	Chrysemys_picta_bellii
ENSUAMG00000021991	CHD1L	99	88.688	ENSCANG00000020239	CHD1L	100	88.000	Colobus_angolensis_palliatus
ENSUAMG00000021991	CHD1L	98	85.438	ENSCGRG00001021624	Chd1l	99	84.624	Cricetulus_griseus_chok1gshd
ENSUAMG00000021991	CHD1L	95	85.800	ENSCGRG00000007554	Chd1l	98	86.627	Cricetulus_griseus_crigri
ENSUAMG00000021991	CHD1L	98	63.379	ENSCVAG00000002595	chd1l	91	62.471	Cyprinodon_variegatus
ENSUAMG00000021991	CHD1L	97	66.055	ENSDARG00000015471	chd1l	85	65.940	Danio_rerio
ENSUAMG00000021991	CHD1L	100	88.098	ENSDNOG00000019504	CHD1L	100	87.875	Dasypus_novemcinctus
ENSUAMG00000021991	CHD1L	98	81.432	ENSDORG00000013555	Chd1l	99	81.320	Dipodomys_ordii
ENSUAMG00000021991	CHD1L	89	81.574	ENSETEG00000008445	CHD1L	90	81.395	Echinops_telfairi
ENSUAMG00000021991	CHD1L	65	76.596	ENSEBUG00000005791	chd1l	77	76.596	Eptatretus_burgeri
ENSUAMG00000021991	CHD1L	99	89.888	ENSEASG00005007364	CHD1L	99	90.842	Equus_asinus_asinus
ENSUAMG00000021991	CHD1L	99	89.888	ENSECAG00000008915	CHD1L	99	90.842	Equus_caballus
ENSUAMG00000021991	CHD1L	98	54.668	ENSELUG00000016844	chd1l	85	53.691	Esox_lucius
ENSUAMG00000021991	CHD1L	99	93.107	ENSFCAG00000007777	CHD1L	100	92.444	Felis_catus
ENSUAMG00000021991	CHD1L	99	71.795	ENSFALG00000006087	CHD1L	99	72.018	Ficedula_albicollis
ENSUAMG00000021991	CHD1L	96	87.644	ENSFDAG00000012431	CHD1L	100	88.201	Fukomys_damarensis
ENSUAMG00000021991	CHD1L	98	62.727	ENSFHEG00000012420	chd1l	87	63.688	Fundulus_heteroclitus
ENSUAMG00000021991	CHD1L	96	73.001	ENSGALG00000015038	CHD1L	98	72.059	Gallus_gallus
ENSUAMG00000021991	CHD1L	96	65.212	ENSGAFG00000018198	chd1l	97	62.162	Gambusia_affinis
ENSUAMG00000021991	CHD1L	59	66.277	ENSGACG00000014042	chd1l	98	66.082	Gasterosteus_aculeatus
ENSUAMG00000021991	CHD1L	95	77.458	ENSGAGG00000014432	CHD1L	98	76.047	Gopherus_agassizii
ENSUAMG00000021991	CHD1L	99	89.593	ENSGGOG00000001067	CHD1L	100	88.889	Gorilla_gorilla
ENSUAMG00000021991	CHD1L	97	64.460	ENSHBUG00000007464	chd1l	98	63.923	Haplochromis_burtoni
ENSUAMG00000021991	CHD1L	97	85.845	ENSHGLG00000008933	CHD1L	99	84.994	Heterocephalus_glaber_female
ENSUAMG00000021991	CHD1L	95	84.311	ENSHGLG00100007155	CHD1L	100	83.897	Heterocephalus_glaber_male
ENSUAMG00000021991	CHD1L	96	62.559	ENSHCOG00000012787	chd1l	94	62.077	Hippocampus_comes
ENSUAMG00000021991	CHD1L	98	60.565	ENSIPUG00000022617	chd1l	87	59.572	Ictalurus_punctatus
ENSUAMG00000021991	CHD1L	99	79.441	ENSSTOG00000007032	CHD1L	99	79.441	Ictidomys_tridecemlineatus
ENSUAMG00000021991	CHD1L	98	63.330	ENSKMAG00000014358	chd1l	87	63.892	Kryptolebias_marmoratus
ENSUAMG00000021991	CHD1L	97	64.073	ENSLBEG00000023845	chd1l	99	63.152	Labrus_bergylta
ENSUAMG00000021991	CHD1L	98	64.143	ENSLACG00000006262	CHD1L	86	66.515	Latimeria_chalumnae
ENSUAMG00000021991	CHD1L	97	69.460	ENSLOCG00000010574	chd1l	87	69.056	Lepisosteus_oculatus
ENSUAMG00000021991	CHD1L	96	88.631	ENSLAFG00000018136	CHD1L	99	88.681	Loxodonta_africana
ENSUAMG00000021991	CHD1L	97	87.897	ENSMFAG00000043562	CHD1L	100	90.315	Macaca_fascicularis
ENSUAMG00000021991	CHD1L	98	90.330	ENSMMUG00000009024	CHD1L	100	89.444	Macaca_mulatta
ENSUAMG00000021991	CHD1L	98	90.216	ENSMNEG00000039905	CHD1L	100	89.333	Macaca_nemestrina
ENSUAMG00000021991	CHD1L	98	90.444	ENSMLEG00000030900	CHD1L	100	89.556	Mandrillus_leucophaeus
ENSUAMG00000021991	CHD1L	95	64.916	ENSMAMG00000012822	chd1l	98	61.816	Mastacembelus_armatus
ENSUAMG00000021991	CHD1L	97	64.465	ENSMZEG00005020830	chd1l	88	64.692	Maylandia_zebra
ENSUAMG00000021991	CHD1L	95	72.887	ENSMGAG00000014304	CHD1L	99	73.122	Meleagris_gallopavo
ENSUAMG00000021991	CHD1L	99	90.632	ENSMICG00000002497	CHD1L	99	90.439	Microcebus_murinus
ENSUAMG00000021991	CHD1L	99	85.095	ENSMOCG00000006305	Chd1l	99	84.983	Microtus_ochrogaster
ENSUAMG00000021991	CHD1L	98	59.665	ENSMMOG00000005964	chd1l	93	59.553	Mola_mola
ENSUAMG00000021991	CHD1L	98	80.204	ENSMODG00000018717	CHD1L	99	80.430	Monodelphis_domestica
ENSUAMG00000021991	CHD1L	97	63.584	ENSMALG00000014675	chd1l	86	63.927	Monopterus_albus
ENSUAMG00000021991	CHD1L	99	84.305	MGP_CAROLIEiJ_G0025401	Chd1l	99	84.193	Mus_caroli
ENSUAMG00000021991	CHD1L	99	83.389	ENSMUSG00000028089	Chd1l	99	83.612	Mus_musculus
ENSUAMG00000021991	CHD1L	99	84.865	MGP_PahariEiJ_G0026845	Chd1l	99	84.753	Mus_pahari
ENSUAMG00000021991	CHD1L	99	84.702	MGP_SPRETEiJ_G0026347	Chd1l	99	84.589	Mus_spretus
ENSUAMG00000021991	CHD1L	100	93.653	ENSMPUG00000000615	CHD1L	100	93.430	Mustela_putorius_furo
ENSUAMG00000021991	CHD1L	99	86.883	ENSMLUG00000007573	CHD1L	99	86.409	Myotis_lucifugus
ENSUAMG00000021991	CHD1L	96	82.048	ENSNGAG00000000908	Chd1l	99	81.143	Nannospalax_galili
ENSUAMG00000021991	CHD1L	95	63.152	ENSNBRG00000006021	chd1l	93	62.890	Neolamprologus_brichardi
ENSUAMG00000021991	CHD1L	99	89.706	ENSNLEG00000000179	CHD1L	100	89.000	Nomascus_leucogenys
ENSUAMG00000021991	CHD1L	97	73.263	ENSOPRG00000006973	CHD1L	99	74.941	Ochotona_princeps
ENSUAMG00000021991	CHD1L	98	82.883	ENSODEG00000002494	CHD1L	99	81.798	Octodon_degus
ENSUAMG00000021991	CHD1L	97	64.465	ENSONIG00000003183	chd1l	89	64.920	Oreochromis_niloticus
ENSUAMG00000021991	CHD1L	88	71.281	ENSOANG00000003068	CHD1L	93	72.114	Ornithorhynchus_anatinus
ENSUAMG00000021991	CHD1L	99	82.793	ENSOCUG00000009336	CHD1L	99	81.828	Oryctolagus_cuniculus
ENSUAMG00000021991	CHD1L	95	64.586	ENSORLG00000003673	chd1l	95	62.457	Oryzias_latipes
ENSUAMG00000021991	CHD1L	98	62.245	ENSORLG00020005123	chd1l	94	62.130	Oryzias_latipes_hni
ENSUAMG00000021991	CHD1L	99	61.461	ENSORLG00015001680	chd1l	98	62.644	Oryzias_latipes_hsok
ENSUAMG00000021991	CHD1L	77	61.397	ENSOMEG00000006109	chd1l	81	61.524	Oryzias_melastigma
ENSUAMG00000021991	CHD1L	99	88.539	ENSOGAG00000008775	CHD1L	99	88.539	Otolemur_garnettii
ENSUAMG00000021991	CHD1L	99	88.876	ENSOARG00000020547	CHD1L	99	89.635	Ovis_aries
ENSUAMG00000021991	CHD1L	97	89.371	ENSPPAG00000039193	CHD1L	100	90.909	Pan_paniscus
ENSUAMG00000021991	CHD1L	99	92.881	ENSPPRG00000010258	CHD1L	100	92.222	Panthera_pardus
ENSUAMG00000021991	CHD1L	99	90.045	ENSPTRG00000001220	CHD1L	100	89.433	Pan_troglodytes
ENSUAMG00000021991	CHD1L	98	90.216	ENSPANG00000009170	CHD1L	100	89.333	Papio_anubis
ENSUAMG00000021991	CHD1L	98	64.294	ENSPKIG00000022166	chd1l	97	63.101	Paramormyrops_kingsleyae
ENSUAMG00000021991	CHD1L	97	75.515	ENSPSIG00000012595	CHD1L	98	74.887	Pelodiscus_sinensis
ENSUAMG00000021991	CHD1L	98	82.584	ENSPEMG00000013528	Chd1l	99	83.203	Peromyscus_maniculatus_bairdii
ENSUAMG00000021991	CHD1L	92	81.943	ENSPCIG00000030409	CHD1L	99	81.563	Phascolarctos_cinereus
ENSUAMG00000021991	CHD1L	96	64.923	ENSPFOG00000015948	chd1l	87	62.570	Poecilia_formosa
ENSUAMG00000021991	CHD1L	98	63.337	ENSPLAG00000015145	chd1l	99	62.934	Poecilia_latipinna
ENSUAMG00000021991	CHD1L	98	62.317	ENSPMEG00000008720	chd1l	92	62.542	Poecilia_mexicana
ENSUAMG00000021991	CHD1L	96	63.507	ENSPREG00000017885	chd1l	98	62.002	Poecilia_reticulata
ENSUAMG00000021991	CHD1L	99	90.611	ENSPPYG00000000946	CHD1L	99	90.337	Pongo_abelii
ENSUAMG00000021991	CHD1L	100	76.169	ENSPCAG00000005959	CHD1L	100	76.058	Procavia_capensis
ENSUAMG00000021991	CHD1L	95	81.032	ENSPVAG00000006084	CHD1L	100	81.087	Pteropus_vampyrus
ENSUAMG00000021991	CHD1L	98	63.739	ENSPNYG00000013001	chd1l	98	63.964	Pundamilia_nyererei
ENSUAMG00000021991	CHD1L	97	64.598	ENSPNAG00000011881	chd1l	85	65.057	Pygocentrus_nattereri
ENSUAMG00000021991	CHD1L	99	84.240	ENSRNOG00000017669	Chd1l	99	85.017	Rattus_norvegicus
ENSUAMG00000021991	CHD1L	99	88.575	ENSRBIG00000041272	CHD1L	100	87.778	Rhinopithecus_bieti
ENSUAMG00000021991	CHD1L	98	88.356	ENSRROG00000041354	CHD1L	99	88.155	Rhinopithecus_roxellana
ENSUAMG00000021991	CHD1L	98	76.477	ENSSHAG00000017395	CHD1L	100	75.808	Sarcophilus_harrisii
ENSUAMG00000021991	CHD1L	96	66.782	ENSSFOG00015003649	chd1l	99	64.123	Scleropages_formosus
ENSUAMG00000021991	CHD1L	99	60.626	ENSSMAG00000019377	chd1l	98	60.112	Scophthalmus_maximus
ENSUAMG00000021991	CHD1L	97	64.133	ENSSDUG00000019831	chd1l	98	63.314	Seriola_dumerili
ENSUAMG00000021991	CHD1L	97	64.009	ENSSLDG00000012714	chd1l	99	62.640	Seriola_lalandi_dorsalis
ENSUAMG00000021991	CHD1L	97	72.769	ENSSPUG00000016865	CHD1L	98	73.112	Sphenodon_punctatus
ENSUAMG00000021991	CHD1L	98	63.946	ENSSPAG00000017653	chd1l	93	64.487	Stegastes_partitus
ENSUAMG00000021991	CHD1L	98	86.659	ENSSSCG00000006701	CHD1L	98	89.189	Sus_scrofa
ENSUAMG00000021991	CHD1L	95	75.029	ENSTGUG00000013392	-	99	74.510	Taeniopygia_guttata
ENSUAMG00000021991	CHD1L	95	60.072	ENSTNIG00000004902	chd1l	99	58.363	Tetraodon_nigroviridis
ENSUAMG00000021991	CHD1L	95	87.573	ENSTTRG00000011711	CHD1L	99	87.339	Tursiops_truncatus
ENSUAMG00000021991	CHD1L	100	99.330	ENSUMAG00000009733	CHD1L	100	99.330	Ursus_maritimus
ENSUAMG00000021991	CHD1L	99	92.688	ENSVVUG00000007316	CHD1L	95	92.576	Vulpes_vulpes
ENSUAMG00000021991	CHD1L	96	62.915	ENSXCOG00000008336	chd1l	86	61.512	Xiphophorus_couchianus
ENSUAMG00000021991	CHD1L	96	65.521	ENSXMAG00000015898	chd1l	98	59.488	Xiphophorus_maculatus