EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000022262 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 76280 bases
Position: chrLZNR01010055.1:16243-92522
Accession: 18398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029093	ResIII	PF04851.15	1.3e-10	1	1
ENSUAMP00000029084	ResIII	PF04851.15	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000032482	SMARCAD1-202	2790	-	ENSUAMP00000029093	929 (aa)	-	-
ENSUAMT00000032472	SMARCAD1-201	3087	-	ENSUAMP00000029084	1028 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000022262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000022262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000022262	SMARCAD1	56	35.441	ENSUAMG00000021991	CHD1L	53	36.015
ENSUAMG00000022262	SMARCAD1	56	37.660	ENSUAMG00000003343	HELLS	67	38.069
ENSUAMG00000022262	SMARCAD1	54	36.154	ENSUAMG00000024036	CHD6	68	32.854
ENSUAMG00000022262	SMARCAD1	55	30.410	ENSUAMG00000011824	RAD54L	66	30.427

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000022262	SMARCAD1	100	97.276	ENSG00000163104	SMARCAD1	100	99.161	Homo_sapiens
ENSUAMG00000022262	SMARCAD1	98	63.068	ENSAPOG00000011446	smarcad1a	95	62.535	Acanthochromis_polyacanthus
ENSUAMG00000022262	SMARCAD1	100	99.708	ENSAMEG00000005844	SMARCAD1	100	99.708	Ailuropoda_melanoleuca
ENSUAMG00000022262	SMARCAD1	72	69.515	ENSACIG00000018326	smarcad1a	100	68.401	Amphilophus_citrinellus
ENSUAMG00000022262	SMARCAD1	100	62.926	ENSAOCG00000019762	smarcad1a	99	62.256	Amphiprion_ocellaris
ENSUAMG00000022262	SMARCAD1	100	63.068	ENSAPEG00000003889	smarcad1a	96	62.535	Amphiprion_percula
ENSUAMG00000022262	SMARCAD1	87	62.921	ENSATEG00000015608	smarcad1a	93	62.921	Anabas_testudineus
ENSUAMG00000022262	SMARCAD1	92	78.649	ENSAPLG00000004630	SMARCAD1	100	72.251	Anas_platyrhynchos
ENSUAMG00000022262	SMARCAD1	99	78.677	ENSACAG00000013554	SMARCAD1	100	70.242	Anolis_carolinensis
ENSUAMG00000022262	SMARCAD1	100	96.505	ENSANAG00000020488	SMARCAD1	100	96.505	Aotus_nancymaae
ENSUAMG00000022262	SMARCAD1	98	62.376	ENSACLG00000017063	smarcad1a	98	61.180	Astatotilapia_calliptera
ENSUAMG00000022262	SMARCAD1	74	60.838	ENSAMXG00000015470	smarcad1a	98	60.955	Astyanax_mexicanus
ENSUAMG00000022262	SMARCAD1	79	60.238	ENSAMXG00000019130	smarcad1b	85	60.025	Astyanax_mexicanus
ENSUAMG00000022262	SMARCAD1	99	98.241	ENSBTAG00000017061	SMARCAD1	100	97.087	Bos_taurus
ENSUAMG00000022262	SMARCAD1	67	42.994	WBGene00010845	M03C11.8	63	42.547	Caenorhabditis_elegans
ENSUAMG00000022262	SMARCAD1	99	97.965	ENSCJAG00000006778	SMARCAD1	100	96.790	Callithrix_jacchus
ENSUAMG00000022262	SMARCAD1	100	99.027	ENSCAFG00000010026	SMARCAD1	100	99.027	Canis_familiaris
ENSUAMG00000022262	SMARCAD1	87	99.102	ENSCAFG00020003994	SMARCAD1	100	99.102	Canis_lupus_dingo
ENSUAMG00000022262	SMARCAD1	99	98.507	ENSCHIG00000012905	SMARCAD1	100	97.374	Capra_hircus
ENSUAMG00000022262	SMARCAD1	100	96.984	ENSTSYG00000002706	SMARCAD1	100	96.984	Carlito_syrichta
ENSUAMG00000022262	SMARCAD1	90	77.516	ENSCAPG00000016744	SMARCAD1	96	78.280	Cavia_aperea
ENSUAMG00000022262	SMARCAD1	99	95.418	ENSCPOG00000011398	SMARCAD1	100	93.520	Cavia_porcellus
ENSUAMG00000022262	SMARCAD1	99	97.829	ENSCCAG00000022264	SMARCAD1	100	98.826	Cebus_capucinus
ENSUAMG00000022262	SMARCAD1	99	98.372	ENSCATG00000035663	SMARCAD1	100	98.092	Cercocebus_atys
ENSUAMG00000022262	SMARCAD1	82	98.335	ENSCSAG00000004186	SMARCAD1	100	98.335	Chlorocebus_sabaeus
ENSUAMG00000022262	SMARCAD1	99	81.941	ENSCPBG00000013203	SMARCAD1	92	81.818	Chrysemys_picta_bellii
ENSUAMG00000022262	SMARCAD1	68	50.696	ENSCING00000001688	-	99	49.775	Ciona_intestinalis
ENSUAMG00000022262	SMARCAD1	99	98.236	ENSCANG00000003556	SMARCAD1	100	99.161	Colobus_angolensis_palliatus
ENSUAMG00000022262	SMARCAD1	99	94.573	ENSCGRG00001015056	Smarcad1	100	92.607	Cricetulus_griseus_chok1gshd
ENSUAMG00000022262	SMARCAD1	99	94.573	ENSCGRG00000014087	Smarcad1	100	92.607	Cricetulus_griseus_crigri
ENSUAMG00000022262	SMARCAD1	96	60.689	ENSCSEG00000014419	-	91	59.041	Cynoglossus_semilaevis
ENSUAMG00000022262	SMARCAD1	100	62.391	ENSCSEG00000017903	smarcad1a	98	60.137	Cynoglossus_semilaevis
ENSUAMG00000022262	SMARCAD1	80	59.628	ENSDARG00000073721	smarcad1b	82	59.518	Danio_rerio
ENSUAMG00000022262	SMARCAD1	85	54.516	ENSDARG00000014041	smarcad1a	92	55.617	Danio_rerio
ENSUAMG00000022262	SMARCAD1	100	96.693	ENSDNOG00000000806	-	100	96.693	Dasypus_novemcinctus
ENSUAMG00000022262	SMARCAD1	99	95.658	ENSDORG00000012331	Smarcad1	100	92.144	Dipodomys_ordii
ENSUAMG00000022262	SMARCAD1	67	45.972	FBgn0032157	Etl1	86	43.129	Drosophila_melanogaster
ENSUAMG00000022262	SMARCAD1	67	46.178	ENSEBUG00000003969	smarcad1a	96	46.353	Eptatretus_burgeri
ENSUAMG00000022262	SMARCAD1	99	99.322	ENSEASG00005012382	SMARCAD1	100	98.152	Equus_asinus_asinus
ENSUAMG00000022262	SMARCAD1	99	99.322	ENSECAG00000011562	SMARCAD1	100	98.152	Equus_caballus
ENSUAMG00000022262	SMARCAD1	79	59.115	ENSELUG00000019154	smarcad1b	79	59.207	Esox_lucius
ENSUAMG00000022262	SMARCAD1	100	51.625	ENSELUG00000018535	smarcad1a	100	50.788	Esox_lucius
ENSUAMG00000022262	SMARCAD1	99	99.458	ENSFCAG00000003958	SMARCAD1	100	99.832	Felis_catus
ENSUAMG00000022262	SMARCAD1	99	78.197	ENSFALG00000006089	SMARCAD1	90	78.197	Ficedula_albicollis
ENSUAMG00000022262	SMARCAD1	100	94.844	ENSFDAG00000017027	SMARCAD1	100	94.844	Fukomys_damarensis
ENSUAMG00000022262	SMARCAD1	94	65.321	ENSFHEG00000012778	smarcad1a	87	62.396	Fundulus_heteroclitus
ENSUAMG00000022262	SMARCAD1	84	58.295	ENSGMOG00000018995	smarcad1a	97	57.719	Gadus_morhua
ENSUAMG00000022262	SMARCAD1	84	70.726	ENSGALG00000037339	SMARCAD1	98	70.726	Gallus_gallus
ENSUAMG00000022262	SMARCAD1	90	66.667	ENSGAFG00000013498	smarcad1a	60	66.667	Gambusia_affinis
ENSUAMG00000022262	SMARCAD1	85	58.163	ENSGACG00000007327	smarcad1a	99	58.617	Gasterosteus_aculeatus
ENSUAMG00000022262	SMARCAD1	99	81.806	ENSGAGG00000008582	SMARCAD1	100	73.699	Gopherus_agassizii
ENSUAMG00000022262	SMARCAD1	100	97.374	ENSGGOG00000023001	SMARCAD1	100	97.374	Gorilla_gorilla
ENSUAMG00000022262	SMARCAD1	98	62.235	ENSHBUG00000011042	smarcad1a	89	61.043	Haplochromis_burtoni
ENSUAMG00000022262	SMARCAD1	99	96.472	ENSHGLG00000005070	SMARCAD1	100	94.762	Heterocephalus_glaber_female
ENSUAMG00000022262	SMARCAD1	99	96.472	ENSHGLG00100006812	SMARCAD1	100	94.762	Heterocephalus_glaber_male
ENSUAMG00000022262	SMARCAD1	67	63.911	ENSHCOG00000007848	smarcad1a	64	60.508	Hippocampus_comes
ENSUAMG00000022262	SMARCAD1	79	59.140	ENSIPUG00000022817	smarcad1b	84	59.618	Ictalurus_punctatus
ENSUAMG00000022262	SMARCAD1	67	65.534	ENSIPUG00000000242	smarcad1a	72	60.948	Ictalurus_punctatus
ENSUAMG00000022262	SMARCAD1	100	96.501	ENSSTOG00000001227	SMARCAD1	100	96.501	Ictidomys_tridecemlineatus
ENSUAMG00000022262	SMARCAD1	100	95.136	ENSJJAG00000022342	Smarcad1	100	95.136	Jaculus_jaculus
ENSUAMG00000022262	SMARCAD1	70	65.091	ENSKMAG00000021351	smarcad1a	66	61.657	Kryptolebias_marmoratus
ENSUAMG00000022262	SMARCAD1	70	66.104	ENSLBEG00000008088	smarcad1a	63	65.821	Labrus_bergylta
ENSUAMG00000022262	SMARCAD1	100	54.563	ENSLOCG00000012909	smarcad1a	100	55.705	Lepisosteus_oculatus
ENSUAMG00000022262	SMARCAD1	100	95.039	ENSLAFG00000000040	SMARCAD1	100	95.039	Loxodonta_africana
ENSUAMG00000022262	SMARCAD1	100	97.179	ENSMFAG00000042606	SMARCAD1	100	97.980	Macaca_fascicularis
ENSUAMG00000022262	SMARCAD1	87	97.980	ENSMMUG00000022242	SMARCAD1	100	97.980	Macaca_mulatta
ENSUAMG00000022262	SMARCAD1	100	97.082	ENSMNEG00000038117	SMARCAD1	100	98.993	Macaca_nemestrina
ENSUAMG00000022262	SMARCAD1	99	98.372	ENSMLEG00000038333	SMARCAD1	100	99.161	Mandrillus_leucophaeus
ENSUAMG00000022262	SMARCAD1	84	58.196	ENSMAMG00000000933	smarcad1a	76	55.767	Mastacembelus_armatus
ENSUAMG00000022262	SMARCAD1	92	66.459	ENSMZEG00005005203	smarcad1a	100	49.727	Maylandia_zebra
ENSUAMG00000022262	SMARCAD1	92	70.296	ENSMGAG00000005577	SMARCAD1	100	64.851	Meleagris_gallopavo
ENSUAMG00000022262	SMARCAD1	99	94.301	ENSMAUG00000008417	Smarcad1	100	92.412	Mesocricetus_auratus
ENSUAMG00000022262	SMARCAD1	99	97.158	ENSMICG00000009746	SMARCAD1	100	95.728	Microcebus_murinus
ENSUAMG00000022262	SMARCAD1	100	92.121	ENSMOCG00000017142	Smarcad1	100	92.121	Microtus_ochrogaster
ENSUAMG00000022262	SMARCAD1	73	63.196	ENSMMOG00000000275	smarcad1a	92	64.829	Mola_mola
ENSUAMG00000022262	SMARCAD1	99	83.436	ENSMODG00000019268	SMARCAD1	100	81.503	Monodelphis_domestica
ENSUAMG00000022262	SMARCAD1	94	93.278	MGP_CAROLIEiJ_G0028458	-	77	93.278	Mus_caroli
ENSUAMG00000022262	SMARCAD1	99	92.992	ENSMUSG00000029920	Smarcad1	100	91.642	Mus_musculus
ENSUAMG00000022262	SMARCAD1	99	93.127	MGP_PahariEiJ_G0022198	Smarcad1	100	91.934	Mus_pahari
ENSUAMG00000022262	SMARCAD1	99	92.992	MGP_SPRETEiJ_G0029462	Smarcad1	100	91.740	Mus_spretus
ENSUAMG00000022262	SMARCAD1	100	99.319	ENSMPUG00000002111	SMARCAD1	100	99.319	Mustela_putorius_furo
ENSUAMG00000022262	SMARCAD1	99	95.399	ENSMLUG00000000425	SMARCAD1	100	93.689	Myotis_lucifugus
ENSUAMG00000022262	SMARCAD1	99	95.822	ENSNGAG00000000810	Smarcad1	100	93.580	Nannospalax_galili
ENSUAMG00000022262	SMARCAD1	73	63.220	ENSNBRG00000012749	smarcad1a	85	61.236	Neolamprologus_brichardi
ENSUAMG00000022262	SMARCAD1	100	97.374	ENSNLEG00000014225	SMARCAD1	100	99.161	Nomascus_leucogenys
ENSUAMG00000022262	SMARCAD1	99	95.929	ENSODEG00000004334	SMARCAD1	100	93.501	Octodon_degus
ENSUAMG00000022262	SMARCAD1	67	66.296	ENSONIG00000015059	smarcad1a	89	57.732	Oreochromis_niloticus
ENSUAMG00000022262	SMARCAD1	79	86.658	ENSOANG00000013764	SMARCAD1	100	84.783	Ornithorhynchus_anatinus
ENSUAMG00000022262	SMARCAD1	99	97.015	ENSOCUG00000017283	SMARCAD1	100	96.012	Oryctolagus_cuniculus
ENSUAMG00000022262	SMARCAD1	93	65.060	ENSORLG00000004869	smarcad1a	93	61.326	Oryzias_latipes
ENSUAMG00000022262	SMARCAD1	93	65.060	ENSORLG00020020569	smarcad1a	93	61.295	Oryzias_latipes_hni
ENSUAMG00000022262	SMARCAD1	93	64.910	ENSORLG00015009045	smarcad1a	92	61.188	Oryzias_latipes_hsok
ENSUAMG00000022262	SMARCAD1	70	65.015	ENSOMEG00000023032	smarcad1a	68	60.935	Oryzias_melastigma
ENSUAMG00000022262	SMARCAD1	100	95.146	ENSOGAG00000011444	SMARCAD1	100	95.146	Otolemur_garnettii
ENSUAMG00000022262	SMARCAD1	99	98.507	ENSOARG00000017851	SMARCAD1	100	97.276	Ovis_aries
ENSUAMG00000022262	SMARCAD1	100	97.471	ENSPPAG00000035715	SMARCAD1	100	97.471	Pan_paniscus
ENSUAMG00000022262	SMARCAD1	99	99.457	ENSPPRG00000024756	SMARCAD1	100	99.832	Panthera_pardus
ENSUAMG00000022262	SMARCAD1	100	98.252	ENSPTIG00000017868	SMARCAD1	100	98.252	Panthera_tigris_altaica
ENSUAMG00000022262	SMARCAD1	100	97.374	ENSPTRG00000023126	SMARCAD1	100	99.161	Pan_troglodytes
ENSUAMG00000022262	SMARCAD1	100	95.926	ENSPANG00000019757	SMARCAD1	100	95.926	Papio_anubis
ENSUAMG00000022262	SMARCAD1	99	81.402	ENSPSIG00000010255	SMARCAD1	100	72.849	Pelodiscus_sinensis
ENSUAMG00000022262	SMARCAD1	67	65.273	ENSPMGG00000010735	smarcad1a	95	63.166	Periophthalmus_magnuspinnatus
ENSUAMG00000022262	SMARCAD1	100	77.519	ENSPEMG00000001854	Smarcad1	100	78.307	Peromyscus_maniculatus_bairdii
ENSUAMG00000022262	SMARCAD1	84	51.919	ENSPMAG00000003516	smarcad1a	99	47.483	Petromyzon_marinus
ENSUAMG00000022262	SMARCAD1	87	83.251	ENSPCIG00000008137	SMARCAD1	99	88.661	Phascolarctos_cinereus
ENSUAMG00000022262	SMARCAD1	94	66.615	ENSPFOG00000019116	smarcad1a	89	62.204	Poecilia_formosa
ENSUAMG00000022262	SMARCAD1	94	66.459	ENSPLAG00000000108	smarcad1a	89	62.064	Poecilia_latipinna
ENSUAMG00000022262	SMARCAD1	94	66.615	ENSPMEG00000009155	smarcad1a	89	62.204	Poecilia_mexicana
ENSUAMG00000022262	SMARCAD1	95	67.083	ENSPREG00000018185	smarcad1a	94	62.587	Poecilia_reticulata
ENSUAMG00000022262	SMARCAD1	100	96.602	ENSPPYG00000014935	SMARCAD1	100	96.602	Pongo_abelii
ENSUAMG00000022262	SMARCAD1	85	96.911	ENSPCOG00000020478	SMARCAD1	91	96.911	Propithecus_coquereli
ENSUAMG00000022262	SMARCAD1	100	95.631	ENSPVAG00000001760	SMARCAD1	100	95.631	Pteropus_vampyrus
ENSUAMG00000022262	SMARCAD1	74	62.119	ENSPNYG00000010087	smarcad1a	85	60.900	Pundamilia_nyererei
ENSUAMG00000022262	SMARCAD1	99	50.101	ENSPNAG00000001663	smarcad1a	90	54.645	Pygocentrus_nattereri
ENSUAMG00000022262	SMARCAD1	79	60.292	ENSPNAG00000010099	smarcad1b	84	60.000	Pygocentrus_nattereri
ENSUAMG00000022262	SMARCAD1	99	93.935	ENSRNOG00000006391	Smarcad1	100	92.614	Rattus_norvegicus
ENSUAMG00000022262	SMARCAD1	99	98.372	ENSRBIG00000041989	SMARCAD1	100	97.179	Rhinopithecus_bieti
ENSUAMG00000022262	SMARCAD1	99	98.372	ENSRROG00000035309	SMARCAD1	100	97.179	Rhinopithecus_roxellana
ENSUAMG00000022262	SMARCAD1	99	97.829	ENSSBOG00000032114	SMARCAD1	100	98.826	Saimiri_boliviensis_boliviensis
ENSUAMG00000022262	SMARCAD1	99	86.061	ENSSHAG00000001279	SMARCAD1	100	82.466	Sarcophilus_harrisii
ENSUAMG00000022262	SMARCAD1	84	55.422	ENSSFOG00015016814	smarcad1b	100	49.815	Scleropages_formosus
ENSUAMG00000022262	SMARCAD1	79	57.641	ENSSFOG00015020909	smarcad1a	100	57.642	Scleropages_formosus
ENSUAMG00000022262	SMARCAD1	73	63.848	ENSSMAG00000001326	smarcad1a	67	62.654	Scophthalmus_maximus
ENSUAMG00000022262	SMARCAD1	73	63.066	ENSSDUG00000022338	smarcad1a	84	62.256	Seriola_dumerili
ENSUAMG00000022262	SMARCAD1	92	66.303	ENSSLDG00000024986	smarcad1a	90	66.303	Seriola_lalandi_dorsalis
ENSUAMG00000022262	SMARCAD1	62	84.801	ENSSPUG00000004633	SMARCAD1	100	84.757	Sphenodon_punctatus
ENSUAMG00000022262	SMARCAD1	97	63.649	ENSSPAG00000001970	smarcad1a	96	62.483	Stegastes_partitus
ENSUAMG00000022262	SMARCAD1	99	99.186	ENSSSCG00000009193	SMARCAD1	100	99.168	Sus_scrofa
ENSUAMG00000022262	SMARCAD1	79	78.091	ENSTGUG00000003127	SMARCAD1	100	78.061	Taeniopygia_guttata
ENSUAMG00000022262	SMARCAD1	84	57.617	ENSTNIG00000017585	smarcad1a	99	57.617	Tetraodon_nigroviridis
ENSUAMG00000022262	SMARCAD1	91	97.619	ENSTBEG00000002789	SMARCAD1	91	97.619	Tupaia_belangeri
ENSUAMG00000022262	SMARCAD1	97	98.916	ENSTTRG00000000226	SMARCAD1	100	96.825	Tursiops_truncatus
ENSUAMG00000022262	SMARCAD1	100	99.708	ENSUMAG00000004549	SMARCAD1	100	99.708	Ursus_maritimus
ENSUAMG00000022262	SMARCAD1	100	98.833	ENSVVUG00000007271	SMARCAD1	100	99.168	Vulpes_vulpes
ENSUAMG00000022262	SMARCAD1	84	66.023	ENSXETG00000019214	smarcad1	100	65.909	Xenopus_tropicalis
ENSUAMG00000022262	SMARCAD1	99	51.116	ENSXCOG00000005232	smarcad1a	98	51.505	Xiphophorus_couchianus
ENSUAMG00000022262	SMARCAD1	67	66.345	ENSXMAG00000015350	smarcad1a	64	61.732	Xiphophorus_maculatus