EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000022445 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 8460 bases
Position: chrLZNR01004078.1:32395-40854
Accession: 20495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029116	RRM_1	PF00076.22	4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000032505	SLIRP-201	699	-	ENSUAMP00000029116	111 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000022445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000022445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000022445	SLIRP	87	72.165	ENSG00000119705	SLIRP	96	79.545	Homo_sapiens
ENSUAMG00000022445	SLIRP	68	61.842	ENSAPOG00000001298	slirp	76	61.842	Acanthochromis_polyacanthus
ENSUAMG00000022445	SLIRP	82	92.308	ENSAMEG00000003975	SLIRP	100	92.308	Ailuropoda_melanoleuca
ENSUAMG00000022445	SLIRP	92	52.427	ENSACIG00000023083	slirp	99	52.427	Amphilophus_citrinellus
ENSUAMG00000022445	SLIRP	80	56.667	ENSAOCG00000006342	slirp	89	56.667	Amphiprion_ocellaris
ENSUAMG00000022445	SLIRP	80	56.667	ENSAPEG00000015719	-	90	56.667	Amphiprion_percula
ENSUAMG00000022445	SLIRP	80	56.667	ENSAPEG00000015917	slirp	89	56.667	Amphiprion_percula
ENSUAMG00000022445	SLIRP	67	59.459	ENSATEG00000013525	slirp	74	59.459	Anabas_testudineus
ENSUAMG00000022445	SLIRP	78	54.545	ENSAMXG00000018693	slirp	88	54.545	Astyanax_mexicanus
ENSUAMG00000022445	SLIRP	100	76.577	ENSCJAG00000016946	SLIRP	100	76.577	Callithrix_jacchus
ENSUAMG00000022445	SLIRP	100	81.982	ENSCAFG00020015876	-	100	81.982	Canis_lupus_dingo
ENSUAMG00000022445	SLIRP	100	77.477	ENSCCAG00000030130	SLIRP	100	77.477	Cebus_capucinus
ENSUAMG00000022445	SLIRP	100	72.973	ENSCATG00000036327	SLIRP	95	79.545	Cercocebus_atys
ENSUAMG00000022445	SLIRP	90	74.000	ENSCSAG00000011736	SLIRP	100	75.676	Chlorocebus_sabaeus
ENSUAMG00000022445	SLIRP	78	55.172	ENSCPBG00000026327	SLIRP	88	55.172	Chrysemys_picta_bellii
ENSUAMG00000022445	SLIRP	67	81.081	ENSCANG00000032892	SLIRP	90	80.682	Colobus_angolensis_palliatus
ENSUAMG00000022445	SLIRP	100	70.270	ENSCGRG00001024068	Slirp	100	70.270	Cricetulus_griseus_chok1gshd
ENSUAMG00000022445	SLIRP	100	70.270	ENSCGRG00000017440	Slirp	100	70.270	Cricetulus_griseus_crigri
ENSUAMG00000022445	SLIRP	83	58.696	ENSCSEG00000015766	slirp	84	58.696	Cynoglossus_semilaevis
ENSUAMG00000022445	SLIRP	62	57.971	ENSCVAG00000012504	slirp	68	57.971	Cyprinodon_variegatus
ENSUAMG00000022445	SLIRP	68	56.000	ENSDARG00000097753	slirp	72	56.757	Danio_rerio
ENSUAMG00000022445	SLIRP	82	74.725	ENSDNOG00000007721	SLIRP	100	71.171	Dasypus_novemcinctus
ENSUAMG00000022445	SLIRP	100	79.279	ENSDORG00000012379	Slirp	100	79.279	Dipodomys_ordii
ENSUAMG00000022445	SLIRP	90	72.000	ENSETEG00000010345	SLIRP	100	72.072	Echinops_telfairi
ENSUAMG00000022445	SLIRP	100	90.090	ENSEASG00005020193	SLIRP	100	90.090	Equus_asinus_asinus
ENSUAMG00000022445	SLIRP	92	63.725	ENSEEUG00000007257	SLIRP	100	63.725	Erinaceus_europaeus
ENSUAMG00000022445	SLIRP	77	55.814	ENSELUG00000016800	slirp	84	55.814	Esox_lucius
ENSUAMG00000022445	SLIRP	80	88.764	ENSFCAG00000036326	SLIRP	91	88.764	Felis_catus
ENSUAMG00000022445	SLIRP	64	54.930	ENSFALG00000012583	SLIRP	84	52.747	Ficedula_albicollis
ENSUAMG00000022445	SLIRP	97	72.566	ENSFDAG00000008347	SLIRP	100	72.566	Fukomys_damarensis
ENSUAMG00000022445	SLIRP	73	50.000	ENSFHEG00000004709	slirp	86	50.000	Fundulus_heteroclitus
ENSUAMG00000022445	SLIRP	78	50.575	ENSGMOG00000016948	slirp	83	50.575	Gadus_morhua
ENSUAMG00000022445	SLIRP	74	56.098	ENSGALG00000031238	SLIRP	87	56.471	Gallus_gallus
ENSUAMG00000022445	SLIRP	82	55.435	ENSGAFG00000010998	slirp	89	55.435	Gambusia_affinis
ENSUAMG00000022445	SLIRP	65	54.167	ENSGACG00000020137	slirp	84	54.167	Gasterosteus_aculeatus
ENSUAMG00000022445	SLIRP	98	50.459	ENSGAGG00000009953	SLIRP	75	50.459	Gopherus_agassizii
ENSUAMG00000022445	SLIRP	87	72.165	ENSGGOG00000011059	-	95	79.545	Gorilla_gorilla
ENSUAMG00000022445	SLIRP	100	70.270	ENSHGLG00000018491	SLIRP	100	70.270	Heterocephalus_glaber_female
ENSUAMG00000022445	SLIRP	100	70.270	ENSHGLG00100014153	SLIRP	100	70.270	Heterocephalus_glaber_male
ENSUAMG00000022445	SLIRP	68	59.740	ENSHCOG00000006795	slirp	78	59.740	Hippocampus_comes
ENSUAMG00000022445	SLIRP	68	57.895	ENSIPUG00000010214	SLIRP	76	57.895	Ictalurus_punctatus
ENSUAMG00000022445	SLIRP	90	82.000	ENSSTOG00000034316	SLIRP	100	82.883	Ictidomys_tridecemlineatus
ENSUAMG00000022445	SLIRP	81	44.444	ENSKMAG00000002038	slirp	87	44.444	Kryptolebias_marmoratus
ENSUAMG00000022445	SLIRP	81	53.846	ENSLBEG00000007564	slirp	88	53.846	Labrus_bergylta
ENSUAMG00000022445	SLIRP	82	52.747	ENSLACG00000013434	SLIRP	87	52.747	Latimeria_chalumnae
ENSUAMG00000022445	SLIRP	90	73.000	ENSMFAG00000042960	SLIRP	95	79.545	Macaca_fascicularis
ENSUAMG00000022445	SLIRP	90	73.000	ENSMMUG00000029256	SLIRP	95	80.682	Macaca_mulatta
ENSUAMG00000022445	SLIRP	90	73.000	ENSMNEG00000028921	SLIRP	95	79.545	Macaca_nemestrina
ENSUAMG00000022445	SLIRP	79	79.545	ENSMLEG00000043644	SLIRP	90	79.545	Mandrillus_leucophaeus
ENSUAMG00000022445	SLIRP	81	56.044	ENSMZEG00005004617	slirp	89	56.044	Maylandia_zebra
ENSUAMG00000022445	SLIRP	100	74.775	ENSMAUG00000003857	Slirp	100	74.775	Mesocricetus_auratus
ENSUAMG00000022445	SLIRP	100	72.973	ENSMICG00000012080	SLIRP	100	72.973	Microcebus_murinus
ENSUAMG00000022445	SLIRP	98	74.312	ENSMOCG00000016019	Slirp	97	74.312	Microtus_ochrogaster
ENSUAMG00000022445	SLIRP	81	53.846	ENSMMOG00000018268	slirp	88	53.846	Mola_mola
ENSUAMG00000022445	SLIRP	63	67.143	ENSMODG00000005207	-	99	67.143	Monodelphis_domestica
ENSUAMG00000022445	SLIRP	79	51.136	ENSMALG00000012581	slirp	90	51.136	Monopterus_albus
ENSUAMG00000022445	SLIRP	97	77.778	MGP_CAROLIEiJ_G0017995	Slirp	100	77.778	Mus_caroli
ENSUAMG00000022445	SLIRP	98	77.982	ENSMUSG00000021040	Slirp	97	77.982	Mus_musculus
ENSUAMG00000022445	SLIRP	98	77.982	MGP_SPRETEiJ_G0018840	Slirp	97	77.982	Mus_spretus
ENSUAMG00000022445	SLIRP	85	82.979	ENSMLUG00000024998	-	100	80.180	Myotis_lucifugus
ENSUAMG00000022445	SLIRP	90	81.000	ENSMLUG00000029544	-	100	80.180	Myotis_lucifugus
ENSUAMG00000022445	SLIRP	97	76.852	ENSNGAG00000016363	Slirp	100	76.852	Nannospalax_galili
ENSUAMG00000022445	SLIRP	100	71.171	ENSNLEG00000032459	-	95	77.273	Nomascus_leucogenys
ENSUAMG00000022445	SLIRP	93	67.961	ENSNLEG00000027238	-	93	74.074	Nomascus_leucogenys
ENSUAMG00000022445	SLIRP	98	76.147	ENSODEG00000012580	SLIRP	99	74.725	Octodon_degus
ENSUAMG00000022445	SLIRP	81	55.556	ENSONIG00000011692	slirp	89	55.556	Oreochromis_niloticus
ENSUAMG00000022445	SLIRP	89	55.046	ENSOANG00000022366	SLIRP	98	55.046	Ornithorhynchus_anatinus
ENSUAMG00000022445	SLIRP	81	56.044	ENSORLG00000010761	slirp	68	56.044	Oryzias_latipes
ENSUAMG00000022445	SLIRP	81	57.143	ENSORLG00020022188	slirp	88	57.143	Oryzias_latipes_hni
ENSUAMG00000022445	SLIRP	100	50.000	ENSORLG00015020171	slirp	99	50.000	Oryzias_latipes_hsok
ENSUAMG00000022445	SLIRP	81	54.945	ENSOMEG00000019321	slirp	88	54.945	Oryzias_melastigma
ENSUAMG00000022445	SLIRP	87	72.165	ENSPPAG00000040710	-	95	79.545	Pan_paniscus
ENSUAMG00000022445	SLIRP	80	88.764	ENSPPRG00000014350	SLIRP	91	88.764	Panthera_pardus
ENSUAMG00000022445	SLIRP	80	88.764	ENSPTIG00000014196	SLIRP	91	88.764	Panthera_tigris_altaica
ENSUAMG00000022445	SLIRP	86	72.632	ENSPTRG00000030691	SLIRP	95	79.545	Pan_troglodytes
ENSUAMG00000022445	SLIRP	100	74.775	ENSPANG00000026323	SLIRP	95	80.682	Papio_anubis
ENSUAMG00000022445	SLIRP	61	51.471	ENSPKIG00000008831	slirp	67	51.471	Paramormyrops_kingsleyae
ENSUAMG00000022445	SLIRP	61	60.294	ENSPMGG00000010541	slirp	78	60.294	Periophthalmus_magnuspinnatus
ENSUAMG00000022445	SLIRP	88	69.697	ENSPEMG00000013234	Slirp	96	69.091	Peromyscus_maniculatus_bairdii
ENSUAMG00000022445	SLIRP	61	50.000	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSUAMG00000022445	SLIRP	72	60.976	ENSPCIG00000026842	-	88	60.976	Phascolarctos_cinereus
ENSUAMG00000022445	SLIRP	81	57.143	ENSPFOG00000006758	slirp	88	57.143	Poecilia_formosa
ENSUAMG00000022445	SLIRP	81	58.242	ENSPLAG00000011140	slirp	88	58.242	Poecilia_latipinna
ENSUAMG00000022445	SLIRP	81	57.143	ENSPMEG00000019535	slirp	88	57.143	Poecilia_mexicana
ENSUAMG00000022445	SLIRP	81	57.143	ENSPREG00000011673	slirp	88	57.143	Poecilia_reticulata
ENSUAMG00000022445	SLIRP	90	69.000	ENSPPYG00000006030	SLIRP	100	70.270	Pongo_abelii
ENSUAMG00000022445	SLIRP	100	74.775	ENSPCOG00000015159	SLIRP	100	74.775	Propithecus_coquereli
ENSUAMG00000022445	SLIRP	80	58.427	ENSPNAG00000008633	slirp	89	58.427	Pygocentrus_nattereri
ENSUAMG00000022445	SLIRP	88	69.388	ENSRBIG00000035817	-	100	71.560	Rhinopithecus_bieti
ENSUAMG00000022445	SLIRP	68	78.667	ENSRBIG00000031396	-	86	80.233	Rhinopithecus_bieti
ENSUAMG00000022445	SLIRP	69	76.623	ENSRBIG00000032998	-	81	78.409	Rhinopithecus_bieti
ENSUAMG00000022445	SLIRP	90	75.000	ENSRBIG00000032222	-	100	76.577	Rhinopithecus_bieti
ENSUAMG00000022445	SLIRP	69	77.922	ENSRROG00000017133	-	92	79.545	Rhinopithecus_roxellana
ENSUAMG00000022445	SLIRP	90	74.000	ENSRROG00000036656	-	100	75.676	Rhinopithecus_roxellana
ENSUAMG00000022445	SLIRP	83	71.739	ENSRROG00000041312	-	99	73.786	Rhinopithecus_roxellana
ENSUAMG00000022445	SLIRP	68	80.000	ENSRROG00000035604	-	86	81.395	Rhinopithecus_roxellana
ENSUAMG00000022445	SLIRP	79	76.136	ENSSBOG00000020014	SLIRP	95	76.136	Saimiri_boliviensis_boliviensis
ENSUAMG00000022445	SLIRP	63	65.714	ENSSFOG00015011165	slirp	71	65.714	Scleropages_formosus
ENSUAMG00000022445	SLIRP	78	45.977	ENSSMAG00000012930	slirp	85	45.977	Scophthalmus_maximus
ENSUAMG00000022445	SLIRP	67	62.162	ENSSLDG00000023136	slirp	67	62.162	Seriola_lalandi_dorsalis
ENSUAMG00000022445	SLIRP	76	52.941	ENSSPUG00000009346	SLIRP	87	52.941	Sphenodon_punctatus
ENSUAMG00000022445	SLIRP	67	56.757	ENSSPAG00000013477	slirp	74	56.757	Stegastes_partitus
ENSUAMG00000022445	SLIRP	100	81.081	ENSSSCG00000028167	SLIRP	100	81.081	Sus_scrofa
ENSUAMG00000022445	SLIRP	64	57.746	ENSTGUG00000012337	SLIRP	97	52.381	Taeniopygia_guttata
ENSUAMG00000022445	SLIRP	80	51.111	ENSTRUG00000020127	slirp	88	51.111	Takifugu_rubripes
ENSUAMG00000022445	SLIRP	100	99.099	ENSUMAG00000007166	SLIRP	100	99.099	Ursus_maritimus
ENSUAMG00000022445	SLIRP	100	78.378	ENSVPAG00000001781	SLIRP	100	78.378	Vicugna_pacos
ENSUAMG00000022445	SLIRP	86	85.417	ENSVVUG00000004436	SLIRP	100	84.685	Vulpes_vulpes
ENSUAMG00000022445	SLIRP	63	58.571	ENSXETG00000030343	SLIRP	79	58.571	Xenopus_tropicalis
ENSUAMG00000022445	SLIRP	81	53.846	ENSXCOG00000009422	slirp	88	53.846	Xiphophorus_couchianus
ENSUAMG00000022445	SLIRP	81	54.945	ENSXMAG00000015655	slirp	88	54.945	Xiphophorus_maculatus