EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000022574 (Gene tree)
Gene ID: -
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 20256 bases
Position: chrLZNR01004929.1:173448-193703
Accession: 17341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029299	PolyA_pol	PF01743.20	2.9e-33	1	1
ENSUAMP00000029301	PolyA_pol	PF01743.20	3.1e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000032699	TRNT1-201	1636	-	ENSUAMP00000029299	436 (aa)	-	-
ENSUAMT00000032701	TRNT1-202	2106	-	ENSUAMP00000029301	450 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000022574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000022574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000022574	TRNT1	99	91.935	ENSG00000072756	TRNT1	100	91.935	Homo_sapiens
ENSUAMG00000022574	TRNT1	98	66.667	ENSAPOG00000013687	trnt1	99	66.667	Acanthochromis_polyacanthus
ENSUAMG00000022574	TRNT1	99	98.165	ENSAMEG00000014520	TRNT1	100	98.165	Ailuropoda_melanoleuca
ENSUAMG00000022574	TRNT1	97	68.471	ENSACIG00000021706	trnt1	99	68.471	Amphilophus_citrinellus
ENSUAMG00000022574	TRNT1	97	67.294	ENSAOCG00000024612	trnt1	99	67.294	Amphiprion_ocellaris
ENSUAMG00000022574	TRNT1	96	60.192	ENSAPEG00000022627	trnt1	97	60.192	Amphiprion_percula
ENSUAMG00000022574	TRNT1	92	70.471	ENSATEG00000008928	trnt1	99	70.471	Anabas_testudineus
ENSUAMG00000022574	TRNT1	89	76.486	ENSAPLG00000004258	TRNT1	96	76.486	Anas_platyrhynchos
ENSUAMG00000022574	TRNT1	98	74.651	ENSACAG00000005657	TRNT1	98	74.651	Anolis_carolinensis
ENSUAMG00000022574	TRNT1	99	91.705	ENSANAG00000024802	TRNT1	100	91.705	Aotus_nancymaae
ENSUAMG00000022574	TRNT1	97	67.059	ENSACLG00000022227	trnt1	99	67.059	Astatotilapia_calliptera
ENSUAMG00000022574	TRNT1	99	67.442	ENSAMXG00000003960	trnt1	99	67.442	Astyanax_mexicanus
ENSUAMG00000022574	TRNT1	99	90.323	ENSBTAG00000019534	TRNT1	100	90.323	Bos_taurus
ENSUAMG00000022574	TRNT1	93	44.787	WBGene00010089	hpo-31	95	44.787	Caenorhabditis_elegans
ENSUAMG00000022574	TRNT1	99	91.705	ENSCJAG00000015466	TRNT1	100	91.705	Callithrix_jacchus
ENSUAMG00000022574	TRNT1	100	95.183	ENSCAFG00000005985	TRNT1	100	95.183	Canis_familiaris
ENSUAMG00000022574	TRNT1	100	95.183	ENSCAFG00020014746	TRNT1	100	95.183	Canis_lupus_dingo
ENSUAMG00000022574	TRNT1	99	90.323	ENSCHIG00000007030	TRNT1	99	90.323	Capra_hircus
ENSUAMG00000022574	TRNT1	99	91.705	ENSTSYG00000013390	TRNT1	100	91.705	Carlito_syrichta
ENSUAMG00000022574	TRNT1	87	73.879	ENSCAPG00000006891	TRNT1	100	73.879	Cavia_aperea
ENSUAMG00000022574	TRNT1	99	90.300	ENSCPOG00000007849	TRNT1	99	90.300	Cavia_porcellus
ENSUAMG00000022574	TRNT1	95	88.702	ENSCCAG00000002919	TRNT1	100	90.773	Cebus_capucinus
ENSUAMG00000022574	TRNT1	99	92.841	ENSCATG00000031985	TRNT1	99	92.841	Cercocebus_atys
ENSUAMG00000022574	TRNT1	99	90.300	ENSCLAG00000005186	TRNT1	99	90.300	Chinchilla_lanigera
ENSUAMG00000022574	TRNT1	99	92.857	ENSCSAG00000011052	TRNT1	100	92.857	Chlorocebus_sabaeus
ENSUAMG00000022574	TRNT1	84	92.079	ENSCHOG00000005712	TRNT1	85	92.079	Choloepus_hoffmanni
ENSUAMG00000022574	TRNT1	99	77.958	ENSCPBG00000017636	TRNT1	98	77.958	Chrysemys_picta_bellii
ENSUAMG00000022574	TRNT1	93	43.735	ENSCING00000007069	-	100	43.735	Ciona_intestinalis
ENSUAMG00000022574	TRNT1	97	44.706	ENSCSAVG00000007494	-	100	44.706	Ciona_savignyi
ENSUAMG00000022574	TRNT1	99	92.627	ENSCANG00000039030	TRNT1	100	92.627	Colobus_angolensis_palliatus
ENSUAMG00000022574	TRNT1	99	90.323	ENSCGRG00001009998	Trnt1	100	90.323	Cricetulus_griseus_chok1gshd
ENSUAMG00000022574	TRNT1	99	90.323	ENSCGRG00000013410	Trnt1	100	90.323	Cricetulus_griseus_crigri
ENSUAMG00000022574	TRNT1	93	68.227	ENSCSEG00000008157	trnt1	95	68.227	Cynoglossus_semilaevis
ENSUAMG00000022574	TRNT1	95	68.357	ENSCVAG00000019770	trnt1	97	68.357	Cyprinodon_variegatus
ENSUAMG00000022574	TRNT1	94	69.608	ENSDARG00000075297	trnt1	95	69.608	Danio_rerio
ENSUAMG00000022574	TRNT1	99	89.862	ENSDNOG00000008837	TRNT1	100	89.862	Dasypus_novemcinctus
ENSUAMG00000022574	TRNT1	99	88.710	ENSDORG00000014035	Trnt1	100	88.710	Dipodomys_ordii
ENSUAMG00000022574	TRNT1	92	50.000	FBgn0037369	CG2100	83	50.000	Drosophila_melanogaster
ENSUAMG00000022574	TRNT1	57	90.763	ENSETEG00000018177	TRNT1	100	90.763	Echinops_telfairi
ENSUAMG00000022574	TRNT1	92	61.787	ENSEBUG00000012779	-	95	61.787	Eptatretus_burgeri
ENSUAMG00000022574	TRNT1	99	92.396	ENSEASG00005003577	TRNT1	100	92.396	Equus_asinus_asinus
ENSUAMG00000022574	TRNT1	99	92.627	ENSECAG00000014420	TRNT1	100	92.627	Equus_caballus
ENSUAMG00000022574	TRNT1	99	87.558	ENSEEUG00000009567	TRNT1	100	87.558	Erinaceus_europaeus
ENSUAMG00000022574	TRNT1	99	67.361	ENSELUG00000003802	trnt1	99	67.361	Esox_lucius
ENSUAMG00000022574	TRNT1	100	95.642	ENSFCAG00000026805	TRNT1	100	95.642	Felis_catus
ENSUAMG00000022574	TRNT1	88	75.000	ENSFALG00000013539	TRNT1	99	75.000	Ficedula_albicollis
ENSUAMG00000022574	TRNT1	99	90.069	ENSFDAG00000018412	TRNT1	99	90.069	Fukomys_damarensis
ENSUAMG00000022574	TRNT1	93	68.966	ENSFHEG00000019294	trnt1	96	68.966	Fundulus_heteroclitus
ENSUAMG00000022574	TRNT1	94	66.341	ENSGMOG00000007460	trnt1	96	66.341	Gadus_morhua
ENSUAMG00000022574	TRNT1	93	75.062	ENSGALG00000017368	TRNT1	94	75.062	Gallus_gallus
ENSUAMG00000022574	TRNT1	93	68.966	ENSGAFG00000008647	trnt1	96	68.966	Gambusia_affinis
ENSUAMG00000022574	TRNT1	97	64.941	ENSGACG00000011903	trnt1	99	64.941	Gasterosteus_aculeatus
ENSUAMG00000022574	TRNT1	99	78.654	ENSGAGG00000020942	TRNT1	98	78.654	Gopherus_agassizii
ENSUAMG00000022574	TRNT1	99	92.396	ENSGGOG00000015286	TRNT1	100	92.396	Gorilla_gorilla
ENSUAMG00000022574	TRNT1	97	67.059	ENSHBUG00000002797	trnt1	99	67.059	Haplochromis_burtoni
ENSUAMG00000022574	TRNT1	99	85.253	ENSHGLG00000000221	-	99	85.253	Heterocephalus_glaber_female
ENSUAMG00000022574	TRNT1	99	90.069	ENSHGLG00000003649	TRNT1	99	90.069	Heterocephalus_glaber_female
ENSUAMG00000022574	TRNT1	99	88.915	ENSHGLG00100016421	TRNT1	99	88.915	Heterocephalus_glaber_male
ENSUAMG00000022574	TRNT1	97	64.941	ENSHCOG00000010618	trnt1	99	64.941	Hippocampus_comes
ENSUAMG00000022574	TRNT1	95	68.510	ENSIPUG00000000971	trnt1	97	68.510	Ictalurus_punctatus
ENSUAMG00000022574	TRNT1	100	86.697	ENSSTOG00000000150	TRNT1	98	91.089	Ictidomys_tridecemlineatus
ENSUAMG00000022574	TRNT1	99	89.631	ENSJJAG00000018561	Trnt1	99	89.631	Jaculus_jaculus
ENSUAMG00000022574	TRNT1	97	66.588	ENSKMAG00000011307	trnt1	99	66.588	Kryptolebias_marmoratus
ENSUAMG00000022574	TRNT1	94	62.683	ENSLBEG00000019457	trnt1	97	62.683	Labrus_bergylta
ENSUAMG00000022574	TRNT1	100	70.642	ENSLACG00000013227	TRNT1	99	70.642	Latimeria_chalumnae
ENSUAMG00000022574	TRNT1	98	69.231	ENSLOCG00000011105	trnt1	98	69.231	Lepisosteus_oculatus
ENSUAMG00000022574	TRNT1	99	91.705	ENSLAFG00000023191	TRNT1	100	91.705	Loxodonta_africana
ENSUAMG00000022574	TRNT1	99	92.841	ENSMFAG00000045113	TRNT1	99	92.841	Macaca_fascicularis
ENSUAMG00000022574	TRNT1	99	92.841	ENSMMUG00000017983	TRNT1	99	92.841	Macaca_mulatta
ENSUAMG00000022574	TRNT1	99	92.841	ENSMNEG00000037805	TRNT1	99	92.841	Macaca_nemestrina
ENSUAMG00000022574	TRNT1	88	93.979	ENSMLEG00000033671	TRNT1	99	93.979	Mandrillus_leucophaeus
ENSUAMG00000022574	TRNT1	97	68.235	ENSMAMG00000023401	trnt1	99	68.235	Mastacembelus_armatus
ENSUAMG00000022574	TRNT1	97	67.059	ENSMZEG00005009141	trnt1	99	67.059	Maylandia_zebra
ENSUAMG00000022574	TRNT1	73	75.312	ENSMGAG00000009971	TRNT1	99	75.312	Meleagris_gallopavo
ENSUAMG00000022574	TRNT1	99	90.553	ENSMAUG00000020707	Trnt1	100	90.553	Mesocricetus_auratus
ENSUAMG00000022574	TRNT1	99	91.244	ENSMICG00000016615	TRNT1	100	91.244	Microcebus_murinus
ENSUAMG00000022574	TRNT1	99	89.631	ENSMOCG00000004539	Trnt1	100	89.631	Microtus_ochrogaster
ENSUAMG00000022574	TRNT1	95	67.554	ENSMMOG00000010742	trnt1	97	67.554	Mola_mola
ENSUAMG00000022574	TRNT1	99	82.719	ENSMODG00000004368	TRNT1	100	82.719	Monodelphis_domestica
ENSUAMG00000022574	TRNT1	97	66.353	ENSMALG00000008376	trnt1	99	66.353	Monopterus_albus
ENSUAMG00000022574	TRNT1	99	90.553	MGP_CAROLIEiJ_G0028698	Trnt1	100	90.553	Mus_caroli
ENSUAMG00000022574	TRNT1	99	90.092	ENSMUSG00000013736	Trnt1	100	90.092	Mus_musculus
ENSUAMG00000022574	TRNT1	99	90.092	MGP_PahariEiJ_G0022449	Trnt1	100	90.148	Mus_pahari
ENSUAMG00000022574	TRNT1	99	90.092	MGP_SPRETEiJ_G0029726	Trnt1	100	90.092	Mus_spretus
ENSUAMG00000022574	TRNT1	100	96.330	ENSMPUG00000017017	TRNT1	100	96.330	Mustela_putorius_furo
ENSUAMG00000022574	TRNT1	89	87.824	ENSMLUG00000011864	TRNT1	100	87.824	Myotis_lucifugus
ENSUAMG00000022574	TRNT1	99	88.940	ENSNGAG00000000537	Trnt1	100	88.940	Nannospalax_galili
ENSUAMG00000022574	TRNT1	79	67.246	ENSNBRG00000023606	trnt1	99	67.246	Neolamprologus_brichardi
ENSUAMG00000022574	TRNT1	99	92.166	ENSNLEG00000003226	TRNT1	100	92.166	Nomascus_leucogenys
ENSUAMG00000022574	TRNT1	99	83.180	ENSMEUG00000004684	TRNT1	100	83.180	Notamacropus_eugenii
ENSUAMG00000022574	TRNT1	88	78.068	ENSOPRG00000015067	TRNT1	99	78.068	Ochotona_princeps
ENSUAMG00000022574	TRNT1	99	89.376	ENSODEG00000007597	TRNT1	99	89.376	Octodon_degus
ENSUAMG00000022574	TRNT1	97	67.059	ENSONIG00000020273	trnt1	98	67.059	Oreochromis_niloticus
ENSUAMG00000022574	TRNT1	99	73.843	ENSOANG00000007514	TRNT1	99	73.843	Ornithorhynchus_anatinus
ENSUAMG00000022574	TRNT1	100	84.862	ENSOCUG00000008580	TRNT1	100	84.862	Oryctolagus_cuniculus
ENSUAMG00000022574	TRNT1	93	66.749	ENSORLG00000003165	trnt1	96	66.749	Oryzias_latipes
ENSUAMG00000022574	TRNT1	93	66.995	ENSORLG00020022060	trnt1	96	66.995	Oryzias_latipes_hni
ENSUAMG00000022574	TRNT1	93	66.256	ENSORLG00015018915	trnt1	95	66.256	Oryzias_latipes_hsok
ENSUAMG00000022574	TRNT1	94	64.806	ENSOMEG00000003331	trnt1	97	64.806	Oryzias_melastigma
ENSUAMG00000022574	TRNT1	99	90.092	ENSOARG00000008631	TRNT1	99	90.092	Ovis_aries
ENSUAMG00000022574	TRNT1	99	92.396	ENSPPAG00000043566	TRNT1	100	92.396	Pan_paniscus
ENSUAMG00000022574	TRNT1	100	94.954	ENSPPRG00000001327	TRNT1	100	94.954	Panthera_pardus
ENSUAMG00000022574	TRNT1	100	95.183	ENSPTIG00000011448	TRNT1	100	95.183	Panthera_tigris_altaica
ENSUAMG00000022574	TRNT1	99	91.935	ENSPTRG00000014564	TRNT1	100	91.935	Pan_troglodytes
ENSUAMG00000022574	TRNT1	99	92.841	ENSPANG00000025944	TRNT1	99	92.841	Papio_anubis
ENSUAMG00000022574	TRNT1	98	68.372	ENSPKIG00000020015	trnt1	99	68.372	Paramormyrops_kingsleyae
ENSUAMG00000022574	TRNT1	91	80.353	ENSPSIG00000017356	TRNT1	99	82.222	Pelodiscus_sinensis
ENSUAMG00000022574	TRNT1	97	66.118	ENSPMGG00000008888	trnt1	98	66.118	Periophthalmus_magnuspinnatus
ENSUAMG00000022574	TRNT1	99	90.553	ENSPEMG00000019845	Trnt1	100	90.553	Peromyscus_maniculatus_bairdii
ENSUAMG00000022574	TRNT1	99	83.410	ENSPCIG00000030436	TRNT1	100	83.410	Phascolarctos_cinereus
ENSUAMG00000022574	TRNT1	93	68.719	ENSPFOG00000006194	trnt1	95	68.719	Poecilia_formosa
ENSUAMG00000022574	TRNT1	93	68.719	ENSPLAG00000015623	trnt1	99	68.486	Poecilia_latipinna
ENSUAMG00000022574	TRNT1	93	68.719	ENSPMEG00000012216	trnt1	99	68.486	Poecilia_mexicana
ENSUAMG00000022574	TRNT1	93	68.473	ENSPREG00000021470	trnt1	96	68.473	Poecilia_reticulata
ENSUAMG00000022574	TRNT1	99	91.935	ENSPPYG00000013702	TRNT1	100	91.935	Pongo_abelii
ENSUAMG00000022574	TRNT1	88	91.123	ENSPCAG00000001951	TRNT1	100	91.123	Procavia_capensis
ENSUAMG00000022574	TRNT1	99	93.088	ENSPCOG00000022228	TRNT1	100	93.088	Propithecus_coquereli
ENSUAMG00000022574	TRNT1	88	91.146	ENSPVAG00000008784	TRNT1	100	91.146	Pteropus_vampyrus
ENSUAMG00000022574	TRNT1	97	67.059	ENSPNYG00000003120	trnt1	99	67.059	Pundamilia_nyererei
ENSUAMG00000022574	TRNT1	98	66.744	ENSPNAG00000000565	trnt1	99	66.744	Pygocentrus_nattereri
ENSUAMG00000022574	TRNT1	99	89.862	ENSRNOG00000006432	Trnt1	100	89.862	Rattus_norvegicus
ENSUAMG00000022574	TRNT1	99	90.323	ENSRBIG00000042632	TRNT1	100	90.323	Rhinopithecus_bieti
ENSUAMG00000022574	TRNT1	99	92.627	ENSRROG00000036866	TRNT1	100	92.627	Rhinopithecus_roxellana
ENSUAMG00000022574	TRNT1	99	91.705	ENSSBOG00000021208	TRNT1	100	91.705	Saimiri_boliviensis_boliviensis
ENSUAMG00000022574	TRNT1	99	82.719	ENSSHAG00000018861	TRNT1	100	82.719	Sarcophilus_harrisii
ENSUAMG00000022574	TRNT1	99	67.426	ENSSFOG00015020844	trnt1	99	67.898	Scleropages_formosus
ENSUAMG00000022574	TRNT1	97	66.824	ENSSMAG00000015432	trnt1	97	66.824	Scophthalmus_maximus
ENSUAMG00000022574	TRNT1	97	66.118	ENSSDUG00000012320	trnt1	99	66.118	Seriola_dumerili
ENSUAMG00000022574	TRNT1	97	66.118	ENSSLDG00000009325	trnt1	99	66.118	Seriola_lalandi_dorsalis
ENSUAMG00000022574	TRNT1	55	64.435	ENSSLDG00000016463	-	91	64.435	Seriola_lalandi_dorsalis
ENSUAMG00000022574	TRNT1	88	81.984	ENSSPUG00000014153	TRNT1	99	81.984	Sphenodon_punctatus
ENSUAMG00000022574	TRNT1	97	67.059	ENSSPAG00000021005	trnt1	99	67.059	Stegastes_partitus
ENSUAMG00000022574	TRNT1	99	91.244	ENSSSCG00000011529	TRNT1	100	91.244	Sus_scrofa
ENSUAMG00000022574	TRNT1	93	74.568	ENSTGUG00000010192	TRNT1	99	74.568	Taeniopygia_guttata
ENSUAMG00000022574	TRNT1	97	67.294	ENSTRUG00000001088	trnt1	99	67.294	Takifugu_rubripes
ENSUAMG00000022574	TRNT1	93	69.704	ENSTNIG00000007363	trnt1	94	69.704	Tetraodon_nigroviridis
ENSUAMG00000022574	TRNT1	70	77.903	ENSTBEG00000006367	TRNT1	100	77.903	Tupaia_belangeri
ENSUAMG00000022574	TRNT1	99	90.092	ENSTTRG00000007803	TRNT1	100	90.092	Tursiops_truncatus
ENSUAMG00000022574	TRNT1	100	99.541	ENSUMAG00000024092	TRNT1	100	99.541	Ursus_maritimus
ENSUAMG00000022574	TRNT1	100	95.413	ENSVVUG00000012810	TRNT1	100	95.413	Vulpes_vulpes
ENSUAMG00000022574	TRNT1	96	63.981	ENSXETG00000025091	trnt1	99	65.920	Xenopus_tropicalis
ENSUAMG00000022574	TRNT1	93	68.966	ENSXCOG00000010150	trnt1	96	68.966	Xiphophorus_couchianus
ENSUAMG00000022574	TRNT1	93	68.473	ENSXMAG00000002227	trnt1	96	68.473	Xiphophorus_maculatus