EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000022706 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 60424 bases
Position: chrLZNR01009050.1:48465-108888
Accession: 25701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029471	BRK	PF07533.16	1.2e-31	1	2
ENSUAMP00000029471	BRK	PF07533.16	1.2e-31	2	2
ENSUAMP00000029470	BRK	PF07533.16	5e-31	1	2
ENSUAMP00000029470	BRK	PF07533.16	5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000032887	CHD9-201	5538	-	ENSUAMP00000029470	1845 (aa)	-	-
ENSUAMT00000032888	CHD9-202	2898	-	ENSUAMP00000029471	965 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000022706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000022706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000022706	CHD9	89	71.372	ENSUAMG00000025734	CHD7	62	71.372
ENSUAMG00000022706	CHD9	87	63.273	ENSUAMG00000024036	CHD6	59	63.273
ENSUAMG00000022706	CHD9	87	53.009	ENSUAMG00000004198	CHD8	81	69.345

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000022706	CHD9	100	98.901	ENSG00000177200	CHD9	100	98.901	Homo_sapiens
ENSUAMG00000022706	CHD9	95	69.180	ENSAPOG00000023034	chd9	76	66.736	Acanthochromis_polyacanthus
ENSUAMG00000022706	CHD9	100	99.267	ENSAMEG00000016232	CHD9	64	96.950	Ailuropoda_melanoleuca
ENSUAMG00000022706	CHD9	95	69.176	ENSAPEG00000009859	chd9	64	67.404	Amphiprion_percula
ENSUAMG00000022706	CHD9	95	69.513	ENSATEG00000002748	chd9	65	67.725	Anabas_testudineus
ENSUAMG00000022706	CHD9	98	88.645	ENSACAG00000016150	CHD9	63	83.224	Anolis_carolinensis
ENSUAMG00000022706	CHD9	100	97.802	ENSANAG00000015630	CHD9	100	97.802	Aotus_nancymaae
ENSUAMG00000022706	CHD9	100	99.267	ENSBTAG00000002287	CHD9	64	95.840	Bos_taurus
ENSUAMG00000022706	CHD9	100	98.168	ENSCJAG00000001573	CHD9	100	98.168	Callithrix_jacchus
ENSUAMG00000022706	CHD9	100	100.000	ENSCAFG00000009699	CHD9	64	96.679	Canis_familiaris
ENSUAMG00000022706	CHD9	100	100.000	ENSCAFG00020002879	CHD9	100	100.000	Canis_lupus_dingo
ENSUAMG00000022706	CHD9	100	98.901	ENSTSYG00000007693	CHD9	100	98.901	Carlito_syrichta
ENSUAMG00000022706	CHD9	100	98.168	ENSCPOG00000036544	CHD9	66	91.216	Cavia_porcellus
ENSUAMG00000022706	CHD9	100	97.436	ENSCCAG00000036178	CHD9	100	97.436	Cebus_capucinus
ENSUAMG00000022706	CHD9	100	98.168	ENSCATG00000036753	CHD9	100	98.168	Cercocebus_atys
ENSUAMG00000022706	CHD9	98	99.634	ENSCLAG00000007137	CHD9	64	94.430	Chinchilla_lanigera
ENSUAMG00000022706	CHD9	100	98.168	ENSCSAG00000005311	CHD9	64	94.757	Chlorocebus_sabaeus
ENSUAMG00000022706	CHD9	98	88.278	ENSCPBG00000012459	CHD9	68	89.469	Chrysemys_picta_bellii
ENSUAMG00000022706	CHD9	100	98.168	ENSCANG00000030349	CHD9	100	98.168	Colobus_angolensis_palliatus
ENSUAMG00000022706	CHD9	98	96.337	ENSCGRG00001016150	Chd9	63	89.919	Cricetulus_griseus_chok1gshd
ENSUAMG00000022706	CHD9	98	96.337	ENSCGRG00000012850	Chd9	63	89.919	Cricetulus_griseus_crigri
ENSUAMG00000022706	CHD9	100	96.337	ENSDNOG00000006045	CHD9	79	93.148	Dasypus_novemcinctus
ENSUAMG00000022706	CHD9	100	94.872	ENSDORG00000008523	-	93	92.017	Dipodomys_ordii
ENSUAMG00000022706	CHD9	92	100.000	ENSETEG00000009565	CHD9	58	97.895	Echinops_telfairi
ENSUAMG00000022706	CHD9	98	99.267	ENSEASG00005014832	CHD9	84	93.548	Equus_asinus_asinus
ENSUAMG00000022706	CHD9	100	99.634	ENSECAG00000011505	CHD9	64	95.396	Equus_caballus
ENSUAMG00000022706	CHD9	79	99.020	ENSEEUG00000014515	CHD9	53	93.274	Erinaceus_europaeus
ENSUAMG00000022706	CHD9	94	71.579	ENSELUG00000006031	chd9	75	65.855	Esox_lucius
ENSUAMG00000022706	CHD9	100	99.634	ENSFCAG00000022534	CHD9	100	99.634	Felis_catus
ENSUAMG00000022706	CHD9	98	91.575	ENSFALG00000013276	CHD9	76	85.598	Ficedula_albicollis
ENSUAMG00000022706	CHD9	100	99.267	ENSFDAG00000021037	CHD9	64	94.215	Fukomys_damarensis
ENSUAMG00000022706	CHD9	77	76.526	ENSGMOG00000006040	chd9	61	76.526	Gadus_morhua
ENSUAMG00000022706	CHD9	93	86.832	ENSGALG00000039178	CHD9	63	86.423	Gallus_gallus
ENSUAMG00000022706	CHD9	95	68.641	ENSGAFG00000010014	chd9	76	66.788	Gambusia_affinis
ENSUAMG00000022706	CHD9	99	64.414	ENSGACG00000016694	chd9	74	73.274	Gasterosteus_aculeatus
ENSUAMG00000022706	CHD9	98	83.881	ENSGAGG00000001048	-	98	88.645	Gopherus_agassizii
ENSUAMG00000022706	CHD9	100	98.535	ENSGGOG00000014816	CHD9	100	98.535	Gorilla_gorilla
ENSUAMG00000022706	CHD9	96	68.672	ENSHBUG00000023322	chd9	96	70.280	Haplochromis_burtoni
ENSUAMG00000022706	CHD9	100	99.267	ENSHGLG00000014938	CHD9	64	92.126	Heterocephalus_glaber_female
ENSUAMG00000022706	CHD9	100	93.057	ENSHGLG00100007620	-	100	94.872	Heterocephalus_glaber_male
ENSUAMG00000022706	CHD9	96	67.565	ENSIPUG00000016448	chd9	98	73.358	Ictalurus_punctatus
ENSUAMG00000022706	CHD9	100	97.436	ENSSTOG00000022273	CHD9	64	93.895	Ictidomys_tridecemlineatus
ENSUAMG00000022706	CHD9	100	97.436	ENSJJAG00000015741	-	93	93.247	Jaculus_jaculus
ENSUAMG00000022706	CHD9	95	68.729	ENSKMAG00000016784	chd9	61	68.985	Kryptolebias_marmoratus
ENSUAMG00000022706	CHD9	95	67.493	ENSLBEG00000012077	chd9	76	66.251	Labrus_bergylta
ENSUAMG00000022706	CHD9	100	97.070	ENSLAFG00000015374	CHD9	64	94.433	Loxodonta_africana
ENSUAMG00000022706	CHD9	100	98.168	ENSMFAG00000041354	CHD9	100	98.168	Macaca_fascicularis
ENSUAMG00000022706	CHD9	100	98.168	ENSMMUG00000016310	CHD9	100	98.168	Macaca_mulatta
ENSUAMG00000022706	CHD9	100	97.802	ENSMNEG00000031494	CHD9	64	94.703	Macaca_nemestrina
ENSUAMG00000022706	CHD9	100	98.168	ENSMLEG00000043219	CHD9	100	98.168	Mandrillus_leucophaeus
ENSUAMG00000022706	CHD9	95	68.258	ENSMAMG00000003909	chd9	64	65.904	Mastacembelus_armatus
ENSUAMG00000022706	CHD9	95	91.215	ENSMAUG00000000526	-	98	96.400	Mesocricetus_auratus
ENSUAMG00000022706	CHD9	100	98.168	ENSMICG00000016679	CHD9	100	98.168	Microcebus_murinus
ENSUAMG00000022706	CHD9	98	92.471	ENSMOCG00000010691	-	98	95.971	Microtus_ochrogaster
ENSUAMG00000022706	CHD9	98	85.664	ENSMODG00000013142	-	86	89.341	Monodelphis_domestica
ENSUAMG00000022706	CHD9	98	95.238	MGP_CAROLIEiJ_G0031364	Chd9	64	89.653	Mus_caroli
ENSUAMG00000022706	CHD9	98	94.872	ENSMUSG00000056608	Chd9	64	88.835	Mus_musculus
ENSUAMG00000022706	CHD9	98	95.238	MGP_PahariEiJ_G0022964	Chd9	63	87.943	Mus_pahari
ENSUAMG00000022706	CHD9	98	94.505	MGP_SPRETEiJ_G0032483	Chd9	64	89.268	Mus_spretus
ENSUAMG00000022706	CHD9	100	99.634	ENSMPUG00000003285	CHD9	64	96.197	Mustela_putorius_furo
ENSUAMG00000022706	CHD9	100	99.267	ENSMLUG00000004456	CHD9	64	91.966	Myotis_lucifugus
ENSUAMG00000022706	CHD9	100	92.539	ENSNGAG00000015820	-	100	97.070	Nannospalax_galili
ENSUAMG00000022706	CHD9	84	95.044	ENSNLEG00000001026	CHD9	60	95.044	Nomascus_leucogenys
ENSUAMG00000022706	CHD9	87	100.000	ENSOPRG00000011168	CHD9	56	100.000	Ochotona_princeps
ENSUAMG00000022706	CHD9	98	97.810	ENSODEG00000004466	CHD9	64	93.283	Octodon_degus
ENSUAMG00000022706	CHD9	100	93.818	ENSOANG00000013401	CHD9	64	88.651	Ornithorhynchus_anatinus
ENSUAMG00000022706	CHD9	100	97.802	ENSOCUG00000001016	CHD9	76	95.340	Oryctolagus_cuniculus
ENSUAMG00000022706	CHD9	100	98.535	ENSOGAG00000002110	CHD9	64	93.522	Otolemur_garnettii
ENSUAMG00000022706	CHD9	100	98.188	ENSOARG00000017664	CHD9	64	94.709	Ovis_aries
ENSUAMG00000022706	CHD9	100	98.535	ENSPPAG00000039388	-	78	94.697	Pan_paniscus
ENSUAMG00000022706	CHD9	100	99.267	ENSPPRG00000004801	CHD9	100	99.267	Panthera_pardus
ENSUAMG00000022706	CHD9	100	96.978	ENSPTIG00000021854	CHD9	100	94.676	Panthera_tigris_altaica
ENSUAMG00000022706	CHD9	100	98.535	ENSPTRG00000008113	CHD9	100	98.535	Pan_troglodytes
ENSUAMG00000022706	CHD9	100	98.168	ENSPANG00000019307	CHD9	100	98.168	Papio_anubis
ENSUAMG00000022706	CHD9	91	64.563	ENSPMGG00000021802	chd9	100	72.143	Periophthalmus_magnuspinnatus
ENSUAMG00000022706	CHD9	98	91.410	ENSPEMG00000021464	-	98	97.070	Peromyscus_maniculatus_bairdii
ENSUAMG00000022706	CHD9	84	56.345	ENSPMAG00000006035	-	63	66.667	Petromyzon_marinus
ENSUAMG00000022706	CHD9	82	87.403	ENSPCIG00000017215	CHD9	67	89.412	Phascolarctos_cinereus
ENSUAMG00000022706	CHD9	95	68.641	ENSPFOG00000015839	chd9	63	66.823	Poecilia_formosa
ENSUAMG00000022706	CHD9	95	68.975	ENSPLAG00000011118	chd9	76	66.980	Poecilia_latipinna
ENSUAMG00000022706	CHD9	95	69.507	ENSPMEG00000015106	chd9	63	67.356	Poecilia_mexicana
ENSUAMG00000022706	CHD9	95	69.524	ENSPREG00000006473	chd9	76	66.893	Poecilia_reticulata
ENSUAMG00000022706	CHD9	100	98.168	ENSPPYG00000007348	CHD9	64	94.751	Pongo_abelii
ENSUAMG00000022706	CHD9	100	99.267	ENSPCOG00000028433	CHD9	100	99.267	Propithecus_coquereli
ENSUAMG00000022706	CHD9	90	100.000	ENSPVAG00000015617	CHD9	61	93.603	Pteropus_vampyrus
ENSUAMG00000022706	CHD9	88	93.785	ENSRNOG00000049302	Chd9	98	84.055	Rattus_norvegicus
ENSUAMG00000022706	CHD9	100	98.168	ENSRBIG00000035553	CHD9	100	98.168	Rhinopithecus_bieti
ENSUAMG00000022706	CHD9	100	98.168	ENSRROG00000033278	CHD9	100	98.168	Rhinopithecus_roxellana
ENSUAMG00000022706	CHD9	100	97.436	ENSSBOG00000030240	CHD9	100	97.436	Saimiri_boliviensis_boliviensis
ENSUAMG00000022706	CHD9	98	92.727	ENSSHAG00000002719	CHD9	64	87.594	Sarcophilus_harrisii
ENSUAMG00000022706	CHD9	97	69.722	ENSSFOG00015020209	chd9	76	68.500	Scleropages_formosus
ENSUAMG00000022706	CHD9	95	68.607	ENSSDUG00000006139	chd9	76	66.632	Seriola_dumerili
ENSUAMG00000022706	CHD9	95	69.994	ENSSLDG00000017818	chd9	76	66.615	Seriola_lalandi_dorsalis
ENSUAMG00000022706	CHD9	100	95.324	ENSSARG00000010632	CHD9	64	92.184	Sorex_araneus
ENSUAMG00000022706	CHD9	98	86.214	ENSSPUG00000017465	-	98	91.941	Sphenodon_punctatus
ENSUAMG00000022706	CHD9	84	87.254	ENSTGUG00000007476	CHD9	60	87.571	Taeniopygia_guttata
ENSUAMG00000022706	CHD9	75	68.310	ENSTNIG00000003825	chd9	70	53.546	Tetraodon_nigroviridis
ENSUAMG00000022706	CHD9	84	93.456	ENSTTRG00000012674	CHD9	54	93.456	Tursiops_truncatus
ENSUAMG00000022706	CHD9	86	100.000	ENSUMAG00000004043	CHD9	80	100.000	Ursus_maritimus
ENSUAMG00000022706	CHD9	98	98.535	ENSVPAG00000001374	CHD9	64	95.218	Vicugna_pacos
ENSUAMG00000022706	CHD9	100	100.000	ENSVVUG00000019435	CHD9	64	96.733	Vulpes_vulpes
ENSUAMG00000022706	CHD9	98	81.319	ENSXETG00000000349	chd9	53	83.257	Xenopus_tropicalis
ENSUAMG00000022706	CHD9	95	69.298	ENSXCOG00000012997	chd9	76	67.332	Xiphophorus_couchianus
ENSUAMG00000022706	CHD9	95	68.672	ENSXMAG00000016192	chd9	78	66.909	Xiphophorus_maculatus