EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000022721 (Gene tree)
Gene ID: -
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 11723 bases
Position: chrLZNR01009061.1:3031-14753
Accession: 2890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029888	TruB_N	PF01509.18	3.3e-22	1	1
ENSUAMP00000029862	TruB_N	PF01509.18	1.8e-21	1	1
ENSUAMP00000029884	TruB_N	PF01509.18	1.9e-21	1	1
ENSUAMP00000029863	TruB_N	PF01509.18	2.4e-21	1	1
ENSUAMP00000029887	TruB_N	PF01509.18	2.4e-21	1	1
ENSUAMP00000029862	PUA	PF01472.20	4.7e-18	1	1
ENSUAMP00000029884	PUA	PF01472.20	4.8e-18	1	1
ENSUAMP00000029863	PUA	PF01472.20	5.2e-18	1	1
ENSUAMP00000029887	PUA	PF01472.20	5.3e-18	1	1
ENSUAMP00000029862	DKCLD	PF08068.12	1.2e-31	1	1
ENSUAMP00000029884	DKCLD	PF08068.12	1.4e-31	1	1
ENSUAMP00000029887	DKCLD	PF08068.12	1.5e-31	1	1
ENSUAMP00000029863	DKCLD	PF08068.12	1.6e-31	1	1
ENSUAMP00000029888	DKCLD	PF08068.12	1.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000033341	DKC1-204	1572	-	ENSUAMP00000029887	523 (aa)	-	-
ENSUAMT00000033313	DKC1-202	1614	-	ENSUAMP00000029863	537 (aa)	-	-
ENSUAMT00000033312	DKC1-201	1428	-	ENSUAMP00000029862	475 (aa)	-	-
ENSUAMT00000033342	DKC1-205	924	-	ENSUAMP00000029888	307 (aa)	-	-
ENSUAMT00000033338	DKC1-203	1491	-	ENSUAMP00000029884	496 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000022721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000022721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000022721	DKC1	95	94.678	ENSG00000130826	DKC1	99	99.515	Homo_sapiens
ENSUAMG00000022721	DKC1	87	83.575	ENSAPOG00000007799	dkc1	87	80.180	Acanthochromis_polyacanthus
ENSUAMG00000022721	DKC1	93	98.186	ENSAMEG00000002776	DKC1	95	95.927	Ailuropoda_melanoleuca
ENSUAMG00000022721	DKC1	83	87.121	ENSACIG00000022614	dkc1	85	85.610	Amphilophus_citrinellus
ENSUAMG00000022721	DKC1	87	83.575	ENSAOCG00000013159	dkc1	90	79.910	Amphiprion_ocellaris
ENSUAMG00000022721	DKC1	87	83.575	ENSAPEG00000002284	dkc1	90	79.910	Amphiprion_percula
ENSUAMG00000022721	DKC1	85	83.455	ENSATEG00000013682	dkc1	89	77.925	Anabas_testudineus
ENSUAMG00000022721	DKC1	90	86.682	ENSACAG00000015600	DKC1	79	80.702	Anolis_carolinensis
ENSUAMG00000022721	DKC1	95	94.013	ENSANAG00000022732	DKC1	95	90.946	Aotus_nancymaae
ENSUAMG00000022721	DKC1	83	86.111	ENSACLG00000015605	dkc1	94	76.559	Astatotilapia_calliptera
ENSUAMG00000022721	DKC1	88	84.173	ENSAMXG00000017108	dkc1	92	77.970	Astyanax_mexicanus
ENSUAMG00000022721	DKC1	93	96.372	ENSBTAG00000013045	DKC1	95	91.039	Bos_taurus
ENSUAMG00000022721	DKC1	87	67.070	WBGene00010478	K01G5.5	98	63.901	Caenorhabditis_elegans
ENSUAMG00000022721	DKC1	93	95.238	ENSCJAG00000004210	DKC1	95	90.763	Callithrix_jacchus
ENSUAMG00000022721	DKC1	92	84.598	ENSCAFG00000009311	-	94	80.943	Canis_familiaris
ENSUAMG00000022721	DKC1	95	96.452	ENSCAFG00000019620	-	95	94.501	Canis_familiaris
ENSUAMG00000022721	DKC1	95	96.452	ENSCAFG00020008918	-	95	94.501	Canis_lupus_dingo
ENSUAMG00000022721	DKC1	92	83.448	ENSCAFG00020009379	-	90	79.918	Canis_lupus_dingo
ENSUAMG00000022721	DKC1	93	96.145	ENSCHIG00000017392	DKC1	95	90.835	Capra_hircus
ENSUAMG00000022721	DKC1	95	94.900	ENSTSYG00000007681	DKC1	95	92.354	Carlito_syrichta
ENSUAMG00000022721	DKC1	83	94.924	ENSCAPG00000003342	DKC1	100	89.310	Cavia_aperea
ENSUAMG00000022721	DKC1	95	93.111	ENSCPOG00000008825	DKC1	95	89.738	Cavia_porcellus
ENSUAMG00000022721	DKC1	95	84.701	ENSCCAG00000027418	DKC1	94	82.897	Cebus_capucinus
ENSUAMG00000022721	DKC1	95	93.792	ENSCATG00000033602	DKC1	95	91.147	Cercocebus_atys
ENSUAMG00000022721	DKC1	93	95.455	ENSCLAG00000000720	DKC1	96	90.524	Chinchilla_lanigera
ENSUAMG00000022721	DKC1	95	94.013	ENSCSAG00000006706	DKC1	95	91.348	Chlorocebus_sabaeus
ENSUAMG00000022721	DKC1	85	90.123	ENSCPBG00000005858	DKC1	89	87.915	Chrysemys_picta_bellii
ENSUAMG00000022721	DKC1	88	76.019	ENSCING00000004599	-	84	73.696	Ciona_intestinalis
ENSUAMG00000022721	DKC1	83	78.880	ENSCSAVG00000010047	-	94	75.118	Ciona_savignyi
ENSUAMG00000022721	DKC1	95	94.013	ENSCANG00000027987	DKC1	95	91.348	Colobus_angolensis_palliatus
ENSUAMG00000022721	DKC1	93	92.744	ENSCGRG00001014574	-	95	88.129	Cricetulus_griseus_chok1gshd
ENSUAMG00000022721	DKC1	91	69.111	ENSCGRG00001016789	-	96	68.919	Cricetulus_griseus_chok1gshd
ENSUAMG00000022721	DKC1	93	92.744	ENSCGRG00000016075	-	95	88.129	Cricetulus_griseus_crigri
ENSUAMG00000022721	DKC1	89	69.977	ENSCGRG00000014809	-	91	70.276	Cricetulus_griseus_crigri
ENSUAMG00000022721	DKC1	87	83.095	ENSCSEG00000012633	dkc1	96	78.936	Cynoglossus_semilaevis
ENSUAMG00000022721	DKC1	87	83.575	ENSCVAG00000010155	dkc1	91	77.039	Cyprinodon_variegatus
ENSUAMG00000022721	DKC1	87	83.738	ENSDARG00000016484	dkc1	89	78.571	Danio_rerio
ENSUAMG00000022721	DKC1	93	94.785	ENSDNOG00000004218	DKC1	95	90.524	Dasypus_novemcinctus
ENSUAMG00000022721	DKC1	69	95.755	ENSDORG00000013566	-	98	83.051	Dipodomys_ordii
ENSUAMG00000022721	DKC1	84	73.935	FBgn0259937	Nop60B	89	68.473	Drosophila_melanogaster
ENSUAMG00000022721	DKC1	84	94.486	ENSETEG00000016095	DKC1	81	94.486	Echinops_telfairi
ENSUAMG00000022721	DKC1	81	77.108	ENSEBUG00000015962	dkc1	99	82.253	Eptatretus_burgeri
ENSUAMG00000022721	DKC1	95	96.231	ENSEASG00005007484	DKC1	95	95.132	Equus_asinus_asinus
ENSUAMG00000022721	DKC1	95	96.231	ENSECAG00000023524	DKC1	95	95.132	Equus_caballus
ENSUAMG00000022721	DKC1	88	90.887	ENSEEUG00000003323	DKC1	98	90.887	Erinaceus_europaeus
ENSUAMG00000022721	DKC1	90	82.864	ENSELUG00000014538	dkc1	87	81.279	Esox_lucius
ENSUAMG00000022721	DKC1	93	95.692	ENSFCAG00000006577	DKC1	95	94.297	Felis_catus
ENSUAMG00000022721	DKC1	90	84.954	ENSFALG00000011496	DKC1	90	78.814	Ficedula_albicollis
ENSUAMG00000022721	DKC1	93	94.558	ENSFDAG00000002516	DKC1	96	87.269	Fukomys_damarensis
ENSUAMG00000022721	DKC1	87	82.850	ENSFHEG00000004627	dkc1	88	79.318	Fundulus_heteroclitus
ENSUAMG00000022721	DKC1	82	83.376	ENSGMOG00000017277	dkc1	100	83.376	Gadus_morhua
ENSUAMG00000022721	DKC1	90	87.089	ENSGALG00000005054	DKC1	91	79.830	Gallus_gallus
ENSUAMG00000022721	DKC1	89	82.185	ENSGAFG00000011486	dkc1	81	76.596	Gambusia_affinis
ENSUAMG00000022721	DKC1	84	86.181	ENSGACG00000004373	dkc1	96	89.058	Gasterosteus_aculeatus
ENSUAMG00000022721	DKC1	85	90.370	ENSGAGG00000011330	DKC1	90	82.189	Gopherus_agassizii
ENSUAMG00000022721	DKC1	95	94.678	ENSGGOG00000001045	DKC1	95	91.952	Gorilla_gorilla
ENSUAMG00000022721	DKC1	88	83.493	ENSHBUG00000012436	dkc1	92	77.874	Haplochromis_burtoni
ENSUAMG00000022721	DKC1	95	93.126	ENSHGLG00000000649	DKC1	95	86.531	Heterocephalus_glaber_female
ENSUAMG00000022721	DKC1	95	93.111	ENSHGLG00100001153	DKC1	96	86.503	Heterocephalus_glaber_male
ENSUAMG00000022721	DKC1	83	86.329	ENSHCOG00000021099	dkc1	88	79.866	Hippocampus_comes
ENSUAMG00000022721	DKC1	86	84.390	ENSIPUG00000010309	dkc1	89	77.378	Ictalurus_punctatus
ENSUAMG00000022721	DKC1	95	94.013	ENSSTOG00000001074	-	99	89.583	Ictidomys_tridecemlineatus
ENSUAMG00000022721	DKC1	95	82.483	ENSSTOG00000011904	-	91	80.684	Ictidomys_tridecemlineatus
ENSUAMG00000022721	DKC1	92	84.862	ENSSTOG00000020149	-	95	82.809	Ictidomys_tridecemlineatus
ENSUAMG00000022721	DKC1	69	95.755	ENSJJAG00000010086	-	98	83.390	Jaculus_jaculus
ENSUAMG00000022721	DKC1	88	81.295	ENSKMAG00000008010	dkc1	94	75.855	Kryptolebias_marmoratus
ENSUAMG00000022721	DKC1	87	83.413	ENSLBEG00000019122	dkc1	92	79.372	Labrus_bergylta
ENSUAMG00000022721	DKC1	85	88.148	ENSLACG00000014025	DKC1	91	88.693	Latimeria_chalumnae
ENSUAMG00000022721	DKC1	85	87.562	ENSLOCG00000013713	dkc1	82	88.550	Lepisosteus_oculatus
ENSUAMG00000022721	DKC1	90	94.366	ENSLAFG00000000221	DKC1	86	91.778	Loxodonta_africana
ENSUAMG00000022721	DKC1	95	94.013	ENSMFAG00000032398	DKC1	82	91.952	Macaca_fascicularis
ENSUAMG00000022721	DKC1	95	94.013	ENSMMUG00000005768	DKC1	95	91.348	Macaca_mulatta
ENSUAMG00000022721	DKC1	95	94.013	ENSMNEG00000034503	DKC1	95	91.348	Macaca_nemestrina
ENSUAMG00000022721	DKC1	95	94.013	ENSMLEG00000034422	DKC1	95	91.348	Mandrillus_leucophaeus
ENSUAMG00000022721	DKC1	87	83.981	ENSMAMG00000005427	dkc1	91	85.185	Mastacembelus_armatus
ENSUAMG00000022721	DKC1	88	83.732	ENSMZEG00005014503	dkc1	92	78.091	Maylandia_zebra
ENSUAMG00000022721	DKC1	82	86.889	ENSMGAG00000009238	DKC1	94	79.493	Meleagris_gallopavo
ENSUAMG00000022721	DKC1	69	95.755	ENSMAUG00000016454	-	98	83.390	Mesocricetus_auratus
ENSUAMG00000022721	DKC1	95	94.457	ENSMICG00000038751	-	95	91.919	Microcebus_murinus
ENSUAMG00000022721	DKC1	84	83.292	ENSMICG00000002818	-	99	83.562	Microcebus_murinus
ENSUAMG00000022721	DKC1	69	92.453	ENSMOCG00000001169	-	98	80.339	Microtus_ochrogaster
ENSUAMG00000022721	DKC1	85	84.691	ENSMMOG00000020348	dkc1	88	84.691	Mola_mola
ENSUAMG00000022721	DKC1	84	91.250	ENSMODG00000009243	DKC1	70	91.250	Monodelphis_domestica
ENSUAMG00000022721	DKC1	86	84.069	ENSMALG00000009454	dkc1	90	78.414	Monopterus_albus
ENSUAMG00000022721	DKC1	88	82.477	MGP_CAROLIEiJ_G0033191	Dkc1	86	96.032	Mus_caroli
ENSUAMG00000022721	DKC1	93	93.197	ENSMUSG00000031403	Dkc1	95	89.293	Mus_musculus
ENSUAMG00000022721	DKC1	92	93.607	MGP_PahariEiJ_G0031735	Dkc1	95	88.508	Mus_pahari
ENSUAMG00000022721	DKC1	92	93.607	MGP_SPRETEiJ_G0034351	Dkc1	95	88.889	Mus_spretus
ENSUAMG00000022721	DKC1	95	97.339	ENSMPUG00000016136	DKC1	91	95.927	Mustela_putorius_furo
ENSUAMG00000022721	DKC1	95	87.583	ENSMLUG00000011918	DKC1	87	87.069	Myotis_lucifugus
ENSUAMG00000022721	DKC1	68	96.190	ENSNGAG00000015724	-	98	83.618	Nannospalax_galili
ENSUAMG00000022721	DKC1	83	86.616	ENSNBRG00000005638	dkc1	81	86.216	Neolamprologus_brichardi
ENSUAMG00000022721	DKC1	95	94.678	ENSNLEG00000014323	DKC1	95	91.952	Nomascus_leucogenys
ENSUAMG00000022721	DKC1	86	86.553	ENSMEUG00000001066	DKC1	97	81.081	Notamacropus_eugenii
ENSUAMG00000022721	DKC1	82	84.921	ENSOPRG00000005248	DKC1	73	89.617	Ochotona_princeps
ENSUAMG00000022721	DKC1	69	96.698	ENSODEG00000000549	-	98	84.068	Octodon_degus
ENSUAMG00000022721	DKC1	91	95.128	ENSODEG00000011816	-	89	91.810	Octodon_degus
ENSUAMG00000022721	DKC1	88	84.450	ENSONIG00000013889	dkc1	92	78.788	Oreochromis_niloticus
ENSUAMG00000022721	DKC1	86	92.195	ENSOANG00000008713	-	85	92.195	Ornithorhynchus_anatinus
ENSUAMG00000022721	DKC1	55	64.706	ENSOANG00000022295	-	83	65.033	Ornithorhynchus_anatinus
ENSUAMG00000022721	DKC1	93	95.238	ENSOCUG00000012646	DKC1	95	90.927	Oryctolagus_cuniculus
ENSUAMG00000022721	DKC1	82	86.445	ENSORLG00000018748	dkc1	89	77.483	Oryzias_latipes
ENSUAMG00000022721	DKC1	83	86.364	ENSOMEG00000005786	dkc1	82	86.555	Oryzias_melastigma
ENSUAMG00000022721	DKC1	95	93.570	ENSOGAG00000003399	DKC1	95	91.734	Otolemur_garnettii
ENSUAMG00000022721	DKC1	93	95.918	ENSOARG00000003047	DKC1	95	90.631	Ovis_aries
ENSUAMG00000022721	DKC1	95	94.678	ENSPPAG00000023820	DKC1	95	91.348	Pan_paniscus
ENSUAMG00000022721	DKC1	93	95.692	ENSPPRG00000009104	DKC1	95	94.094	Panthera_pardus
ENSUAMG00000022721	DKC1	89	96.471	ENSPTIG00000017469	DKC1	95	92.781	Panthera_tigris_altaica
ENSUAMG00000022721	DKC1	95	94.678	ENSPTRG00000022449	DKC1	95	91.952	Pan_troglodytes
ENSUAMG00000022721	DKC1	95	94.678	ENSPTRG00000043416	-	82	92.555	Pan_troglodytes
ENSUAMG00000022721	DKC1	95	94.013	ENSPANG00000011978	DKC1	95	91.348	Papio_anubis
ENSUAMG00000022721	DKC1	83	88.071	ENSPKIG00000008443	dkc1	84	87.595	Paramormyrops_kingsleyae
ENSUAMG00000022721	DKC1	77	90.836	ENSPSIG00000013765	DKC1	86	93.557	Pelodiscus_sinensis
ENSUAMG00000022721	DKC1	83	82.576	ENSPMGG00000004097	dkc1	76	80.676	Periophthalmus_magnuspinnatus
ENSUAMG00000022721	DKC1	64	94.924	ENSPEMG00000013348	Dkc1	94	94.737	Peromyscus_maniculatus_bairdii
ENSUAMG00000022721	DKC1	85	91.111	ENSPCIG00000016706	DKC1	70	89.882	Phascolarctos_cinereus
ENSUAMG00000022721	DKC1	89	82.227	ENSPFOG00000018653	dkc1	94	76.858	Poecilia_formosa
ENSUAMG00000022721	DKC1	89	82.227	ENSPLAG00000003272	dkc1	85	76.858	Poecilia_latipinna
ENSUAMG00000022721	DKC1	89	81.991	ENSPMEG00000010413	dkc1	94	76.645	Poecilia_mexicana
ENSUAMG00000022721	DKC1	89	82.464	ENSPREG00000004100	dkc1	78	85.894	Poecilia_reticulata
ENSUAMG00000022721	DKC1	95	94.678	ENSPPYG00000020892	DKC1	97	91.434	Pongo_abelii
ENSUAMG00000022721	DKC1	79	94.652	ENSPCAG00000015034	DKC1	73	94.652	Procavia_capensis
ENSUAMG00000022721	DKC1	95	94.900	ENSPCOG00000026874	DKC1	95	92.555	Propithecus_coquereli
ENSUAMG00000022721	DKC1	93	93.409	ENSPVAG00000009222	DKC1	95	90.698	Pteropus_vampyrus
ENSUAMG00000022721	DKC1	83	86.111	ENSPNYG00000020063	dkc1	79	86.111	Pundamilia_nyererei
ENSUAMG00000022721	DKC1	87	85.060	ENSPNAG00000005780	dkc1	89	78.541	Pygocentrus_nattereri
ENSUAMG00000022721	DKC1	89	86.385	ENSRNOG00000055562	Dkc1	87	85.747	Rattus_norvegicus
ENSUAMG00000022721	DKC1	95	94.013	ENSRBIG00000028457	DKC1	82	91.952	Rhinopithecus_bieti
ENSUAMG00000022721	DKC1	95	94.013	ENSRROG00000044780	DKC1	95	91.348	Rhinopithecus_roxellana
ENSUAMG00000022721	DKC1	83	70.202	YLR175W	-	89	65.814	Saccharomyces_cerevisiae
ENSUAMG00000022721	DKC1	95	94.678	ENSSBOG00000033746	DKC1	95	91.751	Saimiri_boliviensis_boliviensis
ENSUAMG00000022721	DKC1	85	91.111	ENSSHAG00000002463	DKC1	86	91.111	Sarcophilus_harrisii
ENSUAMG00000022721	DKC1	87	84.783	ENSSFOG00015009585	dkc1	81	84.783	Scleropages_formosus
ENSUAMG00000022721	DKC1	86	86.520	ENSSMAG00000002552	dkc1	88	80.000	Scophthalmus_maximus
ENSUAMG00000022721	DKC1	84	86.750	ENSSDUG00000009963	dkc1	88	80.769	Seriola_dumerili
ENSUAMG00000022721	DKC1	86	85.330	ENSSLDG00000019342	dkc1	96	78.710	Seriola_lalandi_dorsalis
ENSUAMG00000022721	DKC1	88	89.260	ENSSARG00000001822	DKC1	96	83.469	Sorex_araneus
ENSUAMG00000022721	DKC1	90	86.247	ENSSPUG00000018907	DKC1	83	85.135	Sphenodon_punctatus
ENSUAMG00000022721	DKC1	88	83.894	ENSSPAG00000002585	dkc1	79	83.894	Stegastes_partitus
ENSUAMG00000022721	DKC1	95	94.013	ENSSSCG00000012823	DKC1	95	93.819	Sus_scrofa
ENSUAMG00000022721	DKC1	82	86.632	ENSTGUG00000006781	DKC1	94	79.582	Taeniopygia_guttata
ENSUAMG00000022721	DKC1	88	83.413	ENSTRUG00000004413	dkc1	84	83.413	Takifugu_rubripes
ENSUAMG00000022721	DKC1	87	67.943	ENSTNIG00000002582	dkc1	82	67.943	Tetraodon_nigroviridis
ENSUAMG00000022721	DKC1	62	93.919	ENSTBEG00000011262	DKC1	94	88.319	Tupaia_belangeri
ENSUAMG00000022721	DKC1	75	99.563	ENSTTRG00000008089	DKC1	66	99.639	Tursiops_truncatus
ENSUAMG00000022721	DKC1	100	99.597	ENSUMAG00000016899	DKC1	100	99.597	Ursus_maritimus
ENSUAMG00000022721	DKC1	90	79.070	ENSVVUG00000021671	-	89	74.442	Vulpes_vulpes
ENSUAMG00000022721	DKC1	96	94.816	ENSVVUG00000020734	-	87	93.241	Vulpes_vulpes
ENSUAMG00000022721	DKC1	87	86.408	ENSXETG00000032517	DKC1	92	79.826	Xenopus_tropicalis
ENSUAMG00000022721	DKC1	83	85.354	ENSXCOG00000005498	dkc1	91	80.615	Xiphophorus_couchianus
ENSUAMG00000022721	DKC1	89	81.991	ENSXMAG00000004919	dkc1	93	77.489	Xiphophorus_maculatus