EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000022911 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 11097 bases
Position: chrLZNR01007953.1:63768-74864
Accession: 25980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029857	zf-CCCH	PF00642.24	4.4e-06	1	1
ENSUAMP00000029851	zf-CCCH	PF00642.24	4.5e-06	1	1
ENSUAMP00000029866	zf-CCCH	PF00642.24	4.6e-06	1	1
ENSUAMP00000029867	zf-CCCH	PF00642.24	4.6e-06	1	1
ENSUAMP00000029799	zf-CCCH	PF00642.24	4.9e-06	1	1
ENSUAMP00000029812	zf-CCCH	PF00642.24	5.1e-06	1	1
ENSUAMP00000029835	zf-CCCH	PF00642.24	5.2e-06	1	1
ENSUAMP00000029867	TRM	PF02005.16	4.9e-148	1	1
ENSUAMP00000029866	TRM	PF02005.16	8.6e-148	1	1
ENSUAMP00000029856	TRM	PF02005.16	9.5e-148	1	1
ENSUAMP00000029851	TRM	PF02005.16	9.7e-148	1	1
ENSUAMP00000029799	TRM	PF02005.16	9.9e-148	1	1
ENSUAMP00000029812	TRM	PF02005.16	1.1e-147	1	1
ENSUAMP00000029835	TRM	PF02005.16	1.3e-147	1	1
ENSUAMP00000029857	TRM	PF02005.16	3.4e-139	1	1
ENSUAMP00000029867	Met_10	PF02475.16	5.3e-06	1	1
ENSUAMP00000029857	Met_10	PF02475.16	5.4e-06	1	1
ENSUAMP00000029866	Met_10	PF02475.16	5.5e-06	1	1
ENSUAMP00000029856	Met_10	PF02475.16	5.7e-06	1	1
ENSUAMP00000029851	Met_10	PF02475.16	5.8e-06	1	1
ENSUAMP00000029799	Met_10	PF02475.16	5.9e-06	1	1
ENSUAMP00000029812	Met_10	PF02475.16	6.1e-06	1	1
ENSUAMP00000029835	Met_10	PF02475.16	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000033300	TRMT1-204	1959	-	ENSUAMP00000029851	652 (aa)	-	-
ENSUAMT00000033281	TRMT1-203	1812	-	ENSUAMP00000029835	603 (aa)	-	-
ENSUAMT00000033306	TRMT1-205	1941	-	ENSUAMP00000029856	646 (aa)	-	-
ENSUAMT00000033307	TRMT1-206	1872	-	ENSUAMP00000029857	623 (aa)	-	-
ENSUAMT00000033256	TRMT1-202	2022	-	ENSUAMP00000029812	673 (aa)	-	-
ENSUAMT00000033317	TRMT1-208	1875	-	ENSUAMP00000029867	624 (aa)	-	-
ENSUAMT00000033241	TRMT1-201	1971	-	ENSUAMP00000029799	656 (aa)	-	-
ENSUAMT00000033316	TRMT1-207	1881	-	ENSUAMP00000029866	626 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000022911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000022911's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000022911	TRMT1	98	88.342	ENSG00000104907	TRMT1	100	93.194	Homo_sapiens
ENSUAMG00000022911	TRMT1	99	98.925	ENSAMEG00000012598	TRMT1	97	98.925	Ailuropoda_melanoleuca
ENSUAMG00000022911	TRMT1	94	56.672	ENSACIG00000018680	trmt1	88	59.408	Amphilophus_citrinellus
ENSUAMG00000022911	TRMT1	95	62.799	ENSAOCG00000006781	trmt1	86	65.921	Amphiprion_ocellaris
ENSUAMG00000022911	TRMT1	95	62.969	ENSAPEG00000007712	trmt1	86	65.979	Amphiprion_percula
ENSUAMG00000022911	TRMT1	95	64.856	ENSATEG00000001872	trmt1	86	67.577	Anabas_testudineus
ENSUAMG00000022911	TRMT1	94	65.455	ENSACAG00000003825	TRMT1	97	65.842	Anolis_carolinensis
ENSUAMG00000022911	TRMT1	97	84.185	ENSANAG00000023016	TRMT1	99	86.016	Aotus_nancymaae
ENSUAMG00000022911	TRMT1	94	61.938	ENSACLG00000010073	trmt1	92	65.331	Astatotilapia_calliptera
ENSUAMG00000022911	TRMT1	93	66.113	ENSAMXG00000012026	trmt1	91	64.734	Astyanax_mexicanus
ENSUAMG00000022911	TRMT1	99	88.923	ENSBTAG00000019325	TRMT1	92	88.923	Bos_taurus
ENSUAMG00000022911	TRMT1	85	40.267	WBGene00006613	trm-1	94	41.210	Caenorhabditis_elegans
ENSUAMG00000022911	TRMT1	99	83.172	ENSCJAG00000004566	TRMT1	99	83.172	Callithrix_jacchus
ENSUAMG00000022911	TRMT1	99	94.470	ENSCAFG00000017070	TRMT1	100	94.976	Canis_familiaris
ENSUAMG00000022911	TRMT1	99	94.695	ENSCAFG00020005397	TRMT1	98	94.695	Canis_lupus_dingo
ENSUAMG00000022911	TRMT1	99	88.479	ENSCHIG00000013569	TRMT1	98	88.479	Capra_hircus
ENSUAMG00000022911	TRMT1	98	82.031	ENSTSYG00000003207	TRMT1	99	81.930	Carlito_syrichta
ENSUAMG00000022911	TRMT1	92	77.897	ENSCAPG00000003355	TRMT1	99	80.000	Cavia_aperea
ENSUAMG00000022911	TRMT1	99	83.127	ENSCPOG00000011754	TRMT1	97	83.127	Cavia_porcellus
ENSUAMG00000022911	TRMT1	99	82.602	ENSCCAG00000022263	TRMT1	99	84.691	Cebus_capucinus
ENSUAMG00000022911	TRMT1	100	86.342	ENSCATG00000039850	TRMT1	98	87.250	Cercocebus_atys
ENSUAMG00000022911	TRMT1	99	63.394	ENSCATG00000038220	-	98	73.150	Cercocebus_atys
ENSUAMG00000022911	TRMT1	98	85.893	ENSCLAG00000015295	TRMT1	98	82.120	Chinchilla_lanigera
ENSUAMG00000022911	TRMT1	81	89.505	ENSCSAG00000006500	TRMT1	98	88.439	Chlorocebus_sabaeus
ENSUAMG00000022911	TRMT1	97	66.877	ENSCPBG00000023866	TRMT1	94	66.667	Chrysemys_picta_bellii
ENSUAMG00000022911	TRMT1	89	45.550	ENSCING00000002884	-	99	45.660	Ciona_intestinalis
ENSUAMG00000022911	TRMT1	86	45.766	ENSCSAVG00000010927	-	100	45.572	Ciona_savignyi
ENSUAMG00000022911	TRMT1	99	71.166	ENSCANG00000040631	TRMT1	99	71.166	Colobus_angolensis_palliatus
ENSUAMG00000022911	TRMT1	95	67.554	ENSCANG00000031650	-	96	68.760	Colobus_angolensis_palliatus
ENSUAMG00000022911	TRMT1	99	82.753	ENSCGRG00001022594	Trmt1	98	83.048	Cricetulus_griseus_chok1gshd
ENSUAMG00000022911	TRMT1	99	82.753	ENSCGRG00000017732	Trmt1	97	83.279	Cricetulus_griseus_crigri
ENSUAMG00000022911	TRMT1	95	63.373	ENSCSEG00000001643	trmt1	91	65.062	Cynoglossus_semilaevis
ENSUAMG00000022911	TRMT1	95	64.151	ENSCVAG00000011886	trmt1	92	64.032	Cyprinodon_variegatus
ENSUAMG00000022911	TRMT1	93	63.432	ENSDARG00000010978	trmt1	95	61.350	Danio_rerio
ENSUAMG00000022911	TRMT1	91	56.415	ENSDNOG00000048240	-	95	62.143	Dasypus_novemcinctus
ENSUAMG00000022911	TRMT1	99	80.923	ENSDORG00000014298	Trmt1	99	80.923	Dipodomys_ordii
ENSUAMG00000022911	TRMT1	85	46.833	FBgn0032430	CG6388	89	47.736	Drosophila_melanogaster
ENSUAMG00000022911	TRMT1	55	85.075	ENSETEG00000015483	-	52	85.075	Echinops_telfairi
ENSUAMG00000022911	TRMT1	93	50.000	ENSEBUG00000003449	trmt1	82	52.415	Eptatretus_burgeri
ENSUAMG00000022911	TRMT1	96	88.141	ENSEASG00005004050	TRMT1	100	88.069	Equus_asinus_asinus
ENSUAMG00000022911	TRMT1	96	88.462	ENSECAG00000016149	TRMT1	100	88.383	Equus_caballus
ENSUAMG00000022911	TRMT1	61	71.788	ENSEEUG00000014102	-	100	71.788	Erinaceus_europaeus
ENSUAMG00000022911	TRMT1	93	61.897	ENSELUG00000021659	trmt1	85	65.451	Esox_lucius
ENSUAMG00000022911	TRMT1	99	92.780	ENSFCAG00000000483	TRMT1	99	92.780	Felis_catus
ENSUAMG00000022911	TRMT1	99	82.488	ENSFDAG00000007386	TRMT1	98	82.488	Fukomys_damarensis
ENSUAMG00000022911	TRMT1	92	65.062	ENSFHEG00000012865	trmt1	92	66.129	Fundulus_heteroclitus
ENSUAMG00000022911	TRMT1	93	58.160	ENSGMOG00000006564	trmt1	98	61.296	Gadus_morhua
ENSUAMG00000022911	TRMT1	95	64.726	ENSGAFG00000011862	trmt1	89	68.116	Gambusia_affinis
ENSUAMG00000022911	TRMT1	93	62.479	ENSGACG00000000227	trmt1	98	61.639	Gasterosteus_aculeatus
ENSUAMG00000022911	TRMT1	95	68.257	ENSGAGG00000016432	TRMT1	94	66.357	Gopherus_agassizii
ENSUAMG00000022911	TRMT1	98	88.506	ENSGGOG00000014007	TRMT1	99	88.264	Gorilla_gorilla
ENSUAMG00000022911	TRMT1	89	57.443	ENSHBUG00000008821	trmt1	94	57.692	Haplochromis_burtoni
ENSUAMG00000022911	TRMT1	99	83.926	ENSHGLG00000015972	TRMT1	98	83.926	Heterocephalus_glaber_female
ENSUAMG00000022911	TRMT1	99	78.812	ENSHGLG00100018112	TRMT1	99	77.245	Heterocephalus_glaber_male
ENSUAMG00000022911	TRMT1	93	61.207	ENSHCOG00000009447	trmt1	88	63.573	Hippocampus_comes
ENSUAMG00000022911	TRMT1	95	63.390	ENSIPUG00000002899	trmt1	85	65.932	Ictalurus_punctatus
ENSUAMG00000022911	TRMT1	100	85.400	ENSSTOG00000012531	TRMT1	99	85.957	Ictidomys_tridecemlineatus
ENSUAMG00000022911	TRMT1	96	82.287	ENSJJAG00000017154	Trmt1	98	81.776	Jaculus_jaculus
ENSUAMG00000022911	TRMT1	93	64.410	ENSKMAG00000011809	trmt1	98	65.144	Kryptolebias_marmoratus
ENSUAMG00000022911	TRMT1	93	64.757	ENSLBEG00000012703	trmt1	84	67.601	Labrus_bergylta
ENSUAMG00000022911	TRMT1	94	55.077	ENSLACG00000014585	TRMT1	99	56.026	Latimeria_chalumnae
ENSUAMG00000022911	TRMT1	93	60.938	ENSLOCG00000006479	trmt1	97	63.176	Lepisosteus_oculatus
ENSUAMG00000022911	TRMT1	98	86.739	ENSLAFG00000014072	TRMT1	99	86.739	Loxodonta_africana
ENSUAMG00000022911	TRMT1	99	87.404	ENSMFAG00000033143	TRMT1	98	87.404	Macaca_fascicularis
ENSUAMG00000022911	TRMT1	99	83.628	ENSMMUG00000001167	TRMT1	99	83.628	Macaca_mulatta
ENSUAMG00000022911	TRMT1	99	87.250	ENSMNEG00000037867	TRMT1	98	87.250	Macaca_nemestrina
ENSUAMG00000022911	TRMT1	99	87.138	ENSMLEG00000016142	TRMT1	99	87.138	Mandrillus_leucophaeus
ENSUAMG00000022911	TRMT1	94	64.298	ENSMAMG00000004357	trmt1	85	67.657	Mastacembelus_armatus
ENSUAMG00000022911	TRMT1	94	62.111	ENSMZEG00005014510	trmt1	85	65.505	Maylandia_zebra
ENSUAMG00000022911	TRMT1	98	82.080	ENSMAUG00000011134	Trmt1	97	82.955	Mesocricetus_auratus
ENSUAMG00000022911	TRMT1	99	88.172	ENSMICG00000000793	TRMT1	98	88.172	Microcebus_murinus
ENSUAMG00000022911	TRMT1	98	82.710	ENSMOCG00000015895	Trmt1	99	82.040	Microtus_ochrogaster
ENSUAMG00000022911	TRMT1	93	64.522	ENSMMOG00000011097	trmt1	92	67.250	Mola_mola
ENSUAMG00000022911	TRMT1	96	74.716	ENSMODG00000011619	TRMT1	99	76.052	Monodelphis_domestica
ENSUAMG00000022911	TRMT1	100	82.059	MGP_CAROLIEiJ_G0031304	Trmt1	100	84.791	Mus_caroli
ENSUAMG00000022911	TRMT1	100	81.747	ENSMUSG00000001909	Trmt1	100	83.650	Mus_musculus
ENSUAMG00000022911	TRMT1	100	81.747	MGP_SPRETEiJ_G0032422	Trmt1	100	83.650	Mus_spretus
ENSUAMG00000022911	TRMT1	99	94.931	ENSMPUG00000004210	TRMT1	93	94.931	Mustela_putorius_furo
ENSUAMG00000022911	TRMT1	100	87.284	ENSMLUG00000012809	TRMT1	97	88.172	Myotis_lucifugus
ENSUAMG00000022911	TRMT1	99	82.381	ENSNGAG00000022486	Trmt1	97	82.736	Nannospalax_galili
ENSUAMG00000022911	TRMT1	81	66.163	ENSNBRG00000024376	trmt1	85	67.953	Neolamprologus_brichardi
ENSUAMG00000022911	TRMT1	82	87.009	ENSNLEG00000013019	-	98	87.009	Nomascus_leucogenys
ENSUAMG00000022911	TRMT1	95	73.116	ENSMEUG00000013756	TRMT1	99	75.717	Notamacropus_eugenii
ENSUAMG00000022911	TRMT1	83	85.843	ENSOPRG00000009471	-	82	85.843	Ochotona_princeps
ENSUAMG00000022911	TRMT1	98	84.867	ENSODEG00000010323	TRMT1	97	84.867	Octodon_degus
ENSUAMG00000022911	TRMT1	93	65.997	ENSONIG00000000400	trmt1	95	66.221	Oreochromis_niloticus
ENSUAMG00000022911	TRMT1	81	89.901	ENSOCUG00000021934	TRMT1	98	89.017	Oryctolagus_cuniculus
ENSUAMG00000022911	TRMT1	96	59.799	ENSORLG00000020074	trmt1	92	62.395	Oryzias_latipes
ENSUAMG00000022911	TRMT1	95	62.969	ENSORLG00020007561	trmt1	91	64.948	Oryzias_latipes_hni
ENSUAMG00000022911	TRMT1	95	63.140	ENSORLG00015006547	trmt1	88	65.636	Oryzias_latipes_hsok
ENSUAMG00000022911	TRMT1	93	64.125	ENSOMEG00000019343	trmt1	86	66.087	Oryzias_melastigma
ENSUAMG00000022911	TRMT1	96	85.463	ENSOGAG00000025576	TRMT1	99	85.039	Otolemur_garnettii
ENSUAMG00000022911	TRMT1	99	75.840	ENSOARG00000009397	TRMT1	92	74.922	Ovis_aries
ENSUAMG00000022911	TRMT1	99	84.462	ENSPPRG00000012117	TRMT1	100	84.462	Panthera_pardus
ENSUAMG00000022911	TRMT1	82	94.260	ENSPTIG00000008833	TRMT1	97	94.529	Panthera_tigris_altaica
ENSUAMG00000022911	TRMT1	98	88.342	ENSPTRG00000010557	TRMT1	99	88.103	Pan_troglodytes
ENSUAMG00000022911	TRMT1	99	66.984	ENSPTRG00000050421	-	96	68.413	Pan_troglodytes
ENSUAMG00000022911	TRMT1	99	87.781	ENSPANG00000009247	TRMT1	98	87.781	Papio_anubis
ENSUAMG00000022911	TRMT1	90	73.013	ENSPANG00000034058	-	96	73.013	Papio_anubis
ENSUAMG00000022911	TRMT1	95	64.007	ENSPKIG00000005309	trmt1	85	66.952	Paramormyrops_kingsleyae
ENSUAMG00000022911	TRMT1	88	60.036	ENSPSIG00000008762	TRMT1	80	60.284	Pelodiscus_sinensis
ENSUAMG00000022911	TRMT1	93	63.240	ENSPMGG00000019764	trmt1	90	65.385	Periophthalmus_magnuspinnatus
ENSUAMG00000022911	TRMT1	97	85.572	ENSPEMG00000016247	Trmt1	98	84.135	Peromyscus_maniculatus_bairdii
ENSUAMG00000022911	TRMT1	95	56.143	ENSPMAG00000004329	trmt1	92	58.545	Petromyzon_marinus
ENSUAMG00000022911	TRMT1	97	73.776	ENSPCIG00000019273	TRMT1	97	73.776	Phascolarctos_cinereus
ENSUAMG00000022911	TRMT1	94	65.917	ENSPFOG00000008527	trmt1	88	69.164	Poecilia_formosa
ENSUAMG00000022911	TRMT1	94	66.842	ENSPLAG00000018788	trmt1	87	71.567	Poecilia_latipinna
ENSUAMG00000022911	TRMT1	93	65.972	ENSPMEG00000013120	trmt1	88	69.056	Poecilia_mexicana
ENSUAMG00000022911	TRMT1	94	65.112	ENSPREG00000000211	trmt1	85	68.576	Poecilia_reticulata
ENSUAMG00000022911	TRMT1	98	88.088	ENSPPYG00000009622	TRMT1	99	87.865	Pongo_abelii
ENSUAMG00000022911	TRMT1	99	79.503	ENSPCAG00000003698	TRMT1	99	79.503	Procavia_capensis
ENSUAMG00000022911	TRMT1	99	88.103	ENSPCOG00000008653	TRMT1	99	88.103	Propithecus_coquereli
ENSUAMG00000022911	TRMT1	99	89.555	ENSPVAG00000015076	TRMT1	99	89.555	Pteropus_vampyrus
ENSUAMG00000022911	TRMT1	94	60.381	ENSPNYG00000013960	trmt1	92	63.415	Pundamilia_nyererei
ENSUAMG00000022911	TRMT1	86	67.015	ENSPNAG00000024859	trmt1	88	68.894	Pygocentrus_nattereri
ENSUAMG00000022911	TRMT1	100	82.371	ENSRNOG00000002914	Trmt1	100	83.931	Rattus_norvegicus
ENSUAMG00000022911	TRMT1	99	87.097	ENSRBIG00000038324	TRMT1	98	87.097	Rhinopithecus_bieti
ENSUAMG00000022911	TRMT1	96	67.937	ENSRBIG00000037505	-	99	68.118	Rhinopithecus_bieti
ENSUAMG00000022911	TRMT1	96	67.143	ENSRROG00000031847	-	98	67.341	Rhinopithecus_roxellana
ENSUAMG00000022911	TRMT1	99	86.943	ENSRROG00000028599	TRMT1	98	86.943	Rhinopithecus_roxellana
ENSUAMG00000022911	TRMT1	85	35.807	YDR120C	-	92	37.127	Saccharomyces_cerevisiae
ENSUAMG00000022911	TRMT1	99	82.315	ENSSBOG00000028861	TRMT1	99	84.365	Saimiri_boliviensis_boliviensis
ENSUAMG00000022911	TRMT1	94	74.742	ENSSHAG00000014381	TRMT1	100	75.080	Sarcophilus_harrisii
ENSUAMG00000022911	TRMT1	95	64.068	ENSSFOG00015004139	trmt1	85	67.586	Scleropages_formosus
ENSUAMG00000022911	TRMT1	95	64.516	ENSSMAG00000021136	trmt1	87	67.521	Scophthalmus_maximus
ENSUAMG00000022911	TRMT1	93	64.410	ENSSDUG00000012740	trmt1	84	67.483	Seriola_dumerili
ENSUAMG00000022911	TRMT1	93	64.236	ENSSLDG00000005971	trmt1	84	67.075	Seriola_lalandi_dorsalis
ENSUAMG00000022911	TRMT1	86	86.506	ENSSARG00000005138	TRMT1	99	85.357	Sorex_araneus
ENSUAMG00000022911	TRMT1	97	53.990	ENSSPUG00000001084	TRMT1	95	54.958	Sphenodon_punctatus
ENSUAMG00000022911	TRMT1	95	61.775	ENSSPAG00000007153	trmt1	95	64.605	Stegastes_partitus
ENSUAMG00000022911	TRMT1	98	90.596	ENSSSCG00000013744	TRMT1	100	90.596	Sus_scrofa
ENSUAMG00000022911	TRMT1	93	59.725	ENSTRUG00000010700	trmt1	86	62.715	Takifugu_rubripes
ENSUAMG00000022911	TRMT1	94	62.976	ENSTNIG00000018808	trmt1	98	65.969	Tetraodon_nigroviridis
ENSUAMG00000022911	TRMT1	98	87.051	ENSTTRG00000006379	TRMT1	99	86.636	Tursiops_truncatus
ENSUAMG00000022911	TRMT1	98	99.215	ENSUMAG00000006027	TRMT1	100	99.215	Ursus_maritimus
ENSUAMG00000022911	TRMT1	99	94.316	ENSVVUG00000024177	TRMT1	98	94.316	Vulpes_vulpes
ENSUAMG00000022911	TRMT1	78	69.787	ENSXETG00000033863	TRMT1	92	71.800	Xenopus_tropicalis
ENSUAMG00000022911	TRMT1	94	64.940	ENSXCOG00000015733	trmt1	88	68.403	Xiphophorus_couchianus
ENSUAMG00000022911	TRMT1	94	64.494	ENSXMAG00000013823	trmt1	98	68.221	Xiphophorus_maculatus