EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000022940 (Gene tree)
Gene ID: -
Gene Symbol: LRPPRC
Alias: GP130|LRP130|LSFC
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 110298 bases
Position: chrLZNR01003529.1:137401-247698
Accession: 15714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000029842	PPR	PF01535.20	4.4e-29	1	6
ENSUAMP00000029842	PPR	PF01535.20	4.4e-29	2	6
ENSUAMP00000029842	PPR	PF01535.20	4.4e-29	3	6
ENSUAMP00000029842	PPR	PF01535.20	4.4e-29	4	6
ENSUAMP00000029842	PPR	PF01535.20	4.4e-29	5	6
ENSUAMP00000029842	PPR	PF01535.20	4.4e-29	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000033288	LRPPRC-201	4320	-	ENSUAMP00000029842	1395 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000022940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000022940's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000022940	LRPPRC	100	80.717	ENSG00000138095	LRPPRC	99	82.576	Homo_sapiens
ENSUAMG00000022940	LRPPRC	94	59.620	ENSAPLG00000008902	LRPPRC	99	59.544	Anas_platyrhynchos
ENSUAMG00000022940	LRPPRC	99	85.334	ENSBTAG00000016368	LRPPRC	99	85.334	Bos_taurus
ENSUAMG00000022940	LRPPRC	99	89.885	ENSCAFG00000002527	LRPPRC	99	89.885	Canis_familiaris
ENSUAMG00000022940	LRPPRC	99	88.881	ENSCAFG00020025995	LRPPRC	99	88.881	Canis_lupus_dingo
ENSUAMG00000022940	LRPPRC	96	84.684	ENSTSYG00000013197	LRPPRC	96	84.684	Carlito_syrichta
ENSUAMG00000022940	LRPPRC	99	63.415	ENSCPBG00000005446	LRPPRC	99	65.574	Chrysemys_picta_bellii
ENSUAMG00000022940	LRPPRC	67	33.470	FBgn0284256	bsf	68	33.470	Drosophila_melanogaster
ENSUAMG00000022940	LRPPRC	99	87.733	ENSEASG00005003715	LRPPRC	99	87.733	Equus_asinus_asinus
ENSUAMG00000022940	LRPPRC	98	87.894	ENSECAG00000023814	LRPPRC	95	87.894	Equus_caballus
ENSUAMG00000022940	LRPPRC	96	57.727	ENSGALG00000009967	LRPPRC	98	57.585	Gallus_gallus
ENSUAMG00000022940	LRPPRC	97	64.823	ENSGAGG00000020227	LRPPRC	97	64.495	Gopherus_agassizii
ENSUAMG00000022940	LRPPRC	100	81.630	ENSMLEG00000043673	LRPPRC	99	83.523	Mandrillus_leucophaeus
ENSUAMG00000022940	LRPPRC	96	58.408	ENSMGAG00000010201	LRPPRC	99	58.408	Meleagris_gallopavo
ENSUAMG00000022940	LRPPRC	100	76.631	MGP_CAROLIEiJ_G0021927	Lrpprc	100	76.631	Mus_caroli
ENSUAMG00000022940	LRPPRC	100	76.846	ENSMUSG00000024120	Lrpprc	100	76.846	Mus_musculus
ENSUAMG00000022940	LRPPRC	100	77.419	MGP_PahariEiJ_G0020917	Lrpprc	100	77.419	Mus_pahari
ENSUAMG00000022940	LRPPRC	100	76.918	MGP_SPRETEiJ_G0022843	Lrpprc	100	76.918	Mus_spretus
ENSUAMG00000022940	LRPPRC	81	80.000	ENSMEUG00000004430	-	89	80.000	Notamacropus_eugenii
ENSUAMG00000022940	LRPPRC	100	78.280	ENSPEMG00000022720	Lrpprc	100	78.280	Peromyscus_maniculatus_bairdii
ENSUAMG00000022940	LRPPRC	99	69.544	ENSPCIG00000006872	LRPPRC	99	69.116	Phascolarctos_cinereus
ENSUAMG00000022940	LRPPRC	99	84.720	ENSPCOG00000001309	LRPPRC	99	87.879	Propithecus_coquereli
ENSUAMG00000022940	LRPPRC	89	61.213	ENSSPUG00000005188	LRPPRC	99	61.213	Sphenodon_punctatus
ENSUAMG00000022940	LRPPRC	67	82.353	ENSTBEG00000011055	-	66	82.353	Tupaia_belangeri
ENSUAMG00000022940	LRPPRC	100	99.427	ENSUMAG00000012801	LRPPRC	100	99.427	Ursus_maritimus
ENSUAMG00000022940	LRPPRC	99	88.379	ENSVVUG00000002339	LRPPRC	99	88.379	Vulpes_vulpes