EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000023061 (Gene tree)
Gene ID: -
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 94395 bases
Position: chrLZNR01000041.1:1322046-1416440
Accession: 18734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000030012	rRNA_proc-arch	PF13234.6	4.8e-87	1	1
ENSUAMP00000030011	rRNA_proc-arch	PF13234.6	4.8e-87	1	1
ENSUAMP00000030011	DEAD	PF00270.29	5.1e-17	1	1
ENSUAMP00000030012	DEAD	PF00270.29	5.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000033485	MTREX-202	3433	-	ENSUAMP00000030012	1013 (aa)	-	-
ENSUAMT00000033484	MTREX-201	3180	-	ENSUAMP00000030011	1042 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000023061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000023061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000023061	MTREX	89	36.724	ENSUAMG00000024336	SKIV2L	77	36.724

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000023061	MTREX	100	98.560	ENSG00000039123	MTREX	100	98.560	Homo_sapiens
ENSUAMG00000023061	MTREX	100	83.159	ENSAPOG00000007814	mtrex	100	83.206	Acanthochromis_polyacanthus
ENSUAMG00000023061	MTREX	100	99.521	ENSAMEG00000013856	MTREX	100	99.521	Ailuropoda_melanoleuca
ENSUAMG00000023061	MTREX	100	81.931	ENSACIG00000015117	mtrex	96	87.879	Amphilophus_citrinellus
ENSUAMG00000023061	MTREX	100	83.143	ENSAOCG00000011884	mtrex	100	83.143	Amphiprion_ocellaris
ENSUAMG00000023061	MTREX	100	83.048	ENSAPEG00000019384	mtrex	100	83.048	Amphiprion_percula
ENSUAMG00000023061	MTREX	100	83.889	ENSATEG00000015117	mtrex	100	83.889	Anabas_testudineus
ENSUAMG00000023061	MTREX	94	93.489	ENSAPLG00000009694	MTREX	99	93.489	Anas_platyrhynchos
ENSUAMG00000023061	MTREX	100	90.787	ENSACAG00000015200	MTREX	96	90.691	Anolis_carolinensis
ENSUAMG00000023061	MTREX	100	98.656	ENSANAG00000023095	MTREX	100	98.656	Aotus_nancymaae
ENSUAMG00000023061	MTREX	100	82.667	ENSACLG00000001921	mtrex	100	82.538	Astatotilapia_calliptera
ENSUAMG00000023061	MTREX	98	83.884	ENSAMXG00000018751	mtrex	99	84.036	Astyanax_mexicanus
ENSUAMG00000023061	MTREX	100	98.752	ENSBTAG00000010518	MTREX	100	98.752	Bos_taurus
ENSUAMG00000023061	MTREX	91	53.628	WBGene00012342	mtr-4	94	53.299	Caenorhabditis_elegans
ENSUAMG00000023061	MTREX	100	97.710	ENSCJAG00000001773	MTREX	100	97.710	Callithrix_jacchus
ENSUAMG00000023061	MTREX	100	99.040	ENSCAFG00000006818	MTREX	100	99.040	Canis_familiaris
ENSUAMG00000023061	MTREX	100	99.040	ENSCAFG00020024352	MTREX	100	99.040	Canis_lupus_dingo
ENSUAMG00000023061	MTREX	100	98.944	ENSCHIG00000024413	MTREX	100	98.944	Capra_hircus
ENSUAMG00000023061	MTREX	94	98.384	ENSTSYG00000007389	MTREX	100	98.384	Carlito_syrichta
ENSUAMG00000023061	MTREX	95	73.668	ENSCAPG00000008696	MTREX	99	73.668	Cavia_aperea
ENSUAMG00000023061	MTREX	100	98.081	ENSCPOG00000009797	MTREX	100	98.081	Cavia_porcellus
ENSUAMG00000023061	MTREX	100	98.656	ENSCCAG00000014177	MTREX	100	98.656	Cebus_capucinus
ENSUAMG00000023061	MTREX	100	98.369	ENSCATG00000042153	MTREX	100	98.369	Cercocebus_atys
ENSUAMG00000023061	MTREX	100	97.889	ENSCLAG00000006622	MTREX	100	97.889	Chinchilla_lanigera
ENSUAMG00000023061	MTREX	100	93.876	ENSCSAG00000016445	MTREX	100	93.876	Chlorocebus_sabaeus
ENSUAMG00000023061	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSUAMG00000023061	MTREX	100	91.946	ENSCPBG00000026551	MTREX	94	92.138	Chrysemys_picta_bellii
ENSUAMG00000023061	MTREX	99	66.539	ENSCING00000003239	-	99	66.539	Ciona_intestinalis
ENSUAMG00000023061	MTREX	99	65.366	ENSCSAVG00000009304	-	100	70.000	Ciona_savignyi
ENSUAMG00000023061	MTREX	100	98.273	ENSCANG00000035770	MTREX	100	98.273	Colobus_angolensis_palliatus
ENSUAMG00000023061	MTREX	100	97.313	ENSCGRG00001024680	Mtrex	100	97.313	Cricetulus_griseus_chok1gshd
ENSUAMG00000023061	MTREX	100	97.313	ENSCGRG00000000307	Mtrex	100	97.313	Cricetulus_griseus_crigri
ENSUAMG00000023061	MTREX	100	81.853	ENSCSEG00000018621	mtrex	98	81.853	Cynoglossus_semilaevis
ENSUAMG00000023061	MTREX	100	83.603	ENSCVAG00000004556	mtrex	100	83.429	Cyprinodon_variegatus
ENSUAMG00000023061	MTREX	100	85.129	ENSDARG00000013457	mtrex	100	85.033	Danio_rerio
ENSUAMG00000023061	MTREX	100	96.654	ENSDNOG00000015375	MTREX	100	96.463	Dasypus_novemcinctus
ENSUAMG00000023061	MTREX	100	97.697	ENSDORG00000006782	Mtrex	100	97.697	Dipodomys_ordii
ENSUAMG00000023061	MTREX	99	62.476	FBgn0001986	Mtr4	99	62.771	Drosophila_melanogaster
ENSUAMG00000023061	MTREX	83	97.248	ENSETEG00000000727	MTREX	80	97.248	Echinops_telfairi
ENSUAMG00000023061	MTREX	99	74.302	ENSEBUG00000012869	mtrex	99	74.302	Eptatretus_burgeri
ENSUAMG00000023061	MTREX	100	98.369	ENSEASG00005013270	MTREX	100	98.369	Equus_asinus_asinus
ENSUAMG00000023061	MTREX	100	98.464	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSUAMG00000023061	MTREX	98	88.780	ENSEEUG00000000527	MTREX	100	88.780	Erinaceus_europaeus
ENSUAMG00000023061	MTREX	98	85.160	ENSELUG00000004898	mtrex	100	89.496	Esox_lucius
ENSUAMG00000023061	MTREX	100	98.848	ENSFCAG00000010575	MTREX	100	98.848	Felis_catus
ENSUAMG00000023061	MTREX	100	90.115	ENSFALG00000010850	MTREX	100	90.019	Ficedula_albicollis
ENSUAMG00000023061	MTREX	100	97.121	ENSFDAG00000011199	MTREX	100	97.121	Fukomys_damarensis
ENSUAMG00000023061	MTREX	100	83.413	ENSFHEG00000023014	mtrex	100	82.555	Fundulus_heteroclitus
ENSUAMG00000023061	MTREX	100	79.962	ENSGMOG00000014702	mtrex	100	79.771	Gadus_morhua
ENSUAMG00000023061	MTREX	100	90.979	ENSGALG00000014709	MTREX	86	91.075	Gallus_gallus
ENSUAMG00000023061	MTREX	100	83.508	ENSGAFG00000012425	mtrex	98	87.397	Gambusia_affinis
ENSUAMG00000023061	MTREX	100	79.123	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSUAMG00000023061	MTREX	100	91.850	ENSGAGG00000020036	MTREX	100	91.467	Gopherus_agassizii
ENSUAMG00000023061	MTREX	100	98.656	ENSGGOG00000001867	MTREX	100	98.656	Gorilla_gorilla
ENSUAMG00000023061	MTREX	100	82.667	ENSHBUG00000006229	mtrex	100	82.538	Haplochromis_burtoni
ENSUAMG00000023061	MTREX	100	97.697	ENSHGLG00000019445	SKIV2L2	100	97.697	Heterocephalus_glaber_female
ENSUAMG00000023061	MTREX	100	97.697	ENSHGLG00100011833	SKIV2L2	100	97.697	Heterocephalus_glaber_male
ENSUAMG00000023061	MTREX	91	84.827	ENSHCOG00000019995	mtrex	100	84.827	Hippocampus_comes
ENSUAMG00000023061	MTREX	100	85.100	ENSIPUG00000024348	skiv2l2	100	84.924	Ictalurus_punctatus
ENSUAMG00000023061	MTREX	100	98.369	ENSSTOG00000010802	MTREX	100	98.369	Ictidomys_tridecemlineatus
ENSUAMG00000023061	MTREX	100	90.883	ENSJJAG00000020975	Mtrex	100	90.883	Jaculus_jaculus
ENSUAMG00000023061	MTREX	100	82.650	ENSKMAG00000012642	mtrex	100	82.617	Kryptolebias_marmoratus
ENSUAMG00000023061	MTREX	100	83.333	ENSLBEG00000019367	mtrex	99	85.981	Labrus_bergylta
ENSUAMG00000023061	MTREX	100	88.495	ENSLACG00000009075	MTREX	100	88.061	Latimeria_chalumnae
ENSUAMG00000023061	MTREX	100	87.165	ENSLOCG00000010186	mtrex	100	86.877	Lepisosteus_oculatus
ENSUAMG00000023061	MTREX	99	96.065	ENSLAFG00000010497	MTREX	100	96.065	Loxodonta_africana
ENSUAMG00000023061	MTREX	100	98.369	ENSMFAG00000031610	MTREX	100	98.369	Macaca_fascicularis
ENSUAMG00000023061	MTREX	100	97.031	ENSMMUG00000010379	MTREX	100	97.031	Macaca_mulatta
ENSUAMG00000023061	MTREX	100	98.369	ENSMNEG00000032746	MTREX	100	98.369	Macaca_nemestrina
ENSUAMG00000023061	MTREX	100	98.369	ENSMLEG00000041051	MTREX	100	98.369	Mandrillus_leucophaeus
ENSUAMG00000023061	MTREX	100	82.713	ENSMAMG00000016753	mtrex	96	88.413	Mastacembelus_armatus
ENSUAMG00000023061	MTREX	100	82.667	ENSMZEG00005000414	mtrex	100	82.538	Maylandia_zebra
ENSUAMG00000023061	MTREX	94	67.644	ENSMGAG00000003980	MTREX	100	67.644	Meleagris_gallopavo
ENSUAMG00000023061	MTREX	100	97.313	ENSMAUG00000010727	Mtrex	100	97.313	Mesocricetus_auratus
ENSUAMG00000023061	MTREX	100	98.848	ENSMICG00000012779	MTREX	100	98.848	Microcebus_murinus
ENSUAMG00000023061	MTREX	100	97.313	ENSMOCG00000019886	Mtrex	100	97.313	Microtus_ochrogaster
ENSUAMG00000023061	MTREX	100	81.584	ENSMMOG00000002476	mtrex	100	81.584	Mola_mola
ENSUAMG00000023061	MTREX	100	93.090	ENSMODG00000019494	MTREX	100	92.823	Monodelphis_domestica
ENSUAMG00000023061	MTREX	92	82.497	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSUAMG00000023061	MTREX	100	96.833	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.833	Mus_caroli
ENSUAMG00000023061	MTREX	100	97.025	ENSMUSG00000016018	Mtrex	100	97.025	Mus_musculus
ENSUAMG00000023061	MTREX	100	96.929	MGP_PahariEiJ_G0015967	Mtrex	100	96.929	Mus_pahari
ENSUAMG00000023061	MTREX	100	97.025	MGP_SPRETEiJ_G0019775	Mtrex	100	97.025	Mus_spretus
ENSUAMG00000023061	MTREX	100	99.424	ENSMPUG00000007619	MTREX	100	99.424	Mustela_putorius_furo
ENSUAMG00000023061	MTREX	100	97.416	ENSMLUG00000001152	MTREX	100	97.416	Myotis_lucifugus
ENSUAMG00000023061	MTREX	100	97.793	ENSNGAG00000011938	Mtrex	100	97.793	Nannospalax_galili
ENSUAMG00000023061	MTREX	100	82.857	ENSNBRG00000011293	mtrex	100	82.729	Neolamprologus_brichardi
ENSUAMG00000023061	MTREX	100	94.540	ENSNLEG00000001494	MTREX	100	94.540	Nomascus_leucogenys
ENSUAMG00000023061	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSUAMG00000023061	MTREX	98	85.556	ENSOPRG00000008009	MTREX	100	82.821	Ochotona_princeps
ENSUAMG00000023061	MTREX	100	97.313	ENSODEG00000017234	MTREX	100	97.313	Octodon_degus
ENSUAMG00000023061	MTREX	100	82.667	ENSONIG00000007587	mtrex	100	82.526	Oreochromis_niloticus
ENSUAMG00000023061	MTREX	51	93.945	ENSOANG00000004885	-	99	93.945	Ornithorhynchus_anatinus
ENSUAMG00000023061	MTREX	100	98.273	ENSOCUG00000004463	MTREX	100	98.273	Oryctolagus_cuniculus
ENSUAMG00000023061	MTREX	100	82.650	ENSORLG00000005443	mtrex	100	82.555	Oryzias_latipes
ENSUAMG00000023061	MTREX	100	82.555	ENSORLG00020006329	mtrex	100	82.459	Oryzias_latipes_hni
ENSUAMG00000023061	MTREX	100	82.336	ENSORLG00015012924	mtrex	100	82.459	Oryzias_latipes_hsok
ENSUAMG00000023061	MTREX	100	81.844	ENSOMEG00000008825	mtrex	100	81.844	Oryzias_melastigma
ENSUAMG00000023061	MTREX	100	98.369	ENSOGAG00000002886	MTREX	100	98.369	Otolemur_garnettii
ENSUAMG00000023061	MTREX	100	98.660	ENSOARG00000007764	MTREX	100	98.660	Ovis_aries
ENSUAMG00000023061	MTREX	100	98.656	ENSPPAG00000039291	MTREX	100	98.656	Pan_paniscus
ENSUAMG00000023061	MTREX	100	98.848	ENSPPRG00000019701	MTREX	100	98.848	Panthera_pardus
ENSUAMG00000023061	MTREX	100	97.313	ENSPTIG00000009313	MTREX	100	97.313	Panthera_tigris_altaica
ENSUAMG00000023061	MTREX	100	98.656	ENSPTRG00000016878	MTREX	100	98.656	Pan_troglodytes
ENSUAMG00000023061	MTREX	100	98.273	ENSPANG00000009697	MTREX	100	98.273	Papio_anubis
ENSUAMG00000023061	MTREX	100	87.106	ENSPKIG00000020833	mtrex	100	87.106	Paramormyrops_kingsleyae
ENSUAMG00000023061	MTREX	100	91.755	ENSPSIG00000012150	MTREX	100	91.946	Pelodiscus_sinensis
ENSUAMG00000023061	MTREX	100	81.125	ENSPMGG00000002582	mtrex	100	81.125	Periophthalmus_magnuspinnatus
ENSUAMG00000023061	MTREX	98	65.660	ENSPMAG00000009668	mtrex	100	65.562	Petromyzon_marinus
ENSUAMG00000023061	MTREX	91	96.727	ENSPCIG00000024730	MTREX	100	96.727	Phascolarctos_cinereus
ENSUAMG00000023061	MTREX	75	87.326	ENSPFOG00000003141	mtrex	100	87.563	Poecilia_formosa
ENSUAMG00000023061	MTREX	100	83.413	ENSPLAG00000021311	mtrex	100	83.413	Poecilia_latipinna
ENSUAMG00000023061	MTREX	92	87.161	ENSPMEG00000010597	mtrex	99	87.828	Poecilia_mexicana
ENSUAMG00000023061	MTREX	100	83.127	ENSPREG00000003089	mtrex	100	83.127	Poecilia_reticulata
ENSUAMG00000023061	MTREX	98	98.634	ENSPPYG00000015469	MTREX	98	98.634	Pongo_abelii
ENSUAMG00000023061	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSUAMG00000023061	MTREX	99	92.534	ENSPCOG00000018092	MTREX	100	92.429	Propithecus_coquereli
ENSUAMG00000023061	MTREX	100	98.944	ENSPVAG00000002445	MTREX	100	98.944	Pteropus_vampyrus
ENSUAMG00000023061	MTREX	100	82.571	ENSPNYG00000006164	mtrex	100	82.443	Pundamilia_nyererei
ENSUAMG00000023061	MTREX	100	86.151	ENSPNAG00000008794	mtrex	100	86.151	Pygocentrus_nattereri
ENSUAMG00000023061	MTREX	99	96.793	ENSRNOG00000010125	Mtrex	97	96.793	Rattus_norvegicus
ENSUAMG00000023061	MTREX	100	96.641	ENSRBIG00000034930	MTREX	100	96.641	Rhinopithecus_bieti
ENSUAMG00000023061	MTREX	100	98.369	ENSRROG00000039895	MTREX	100	98.369	Rhinopithecus_roxellana
ENSUAMG00000023061	MTREX	89	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSUAMG00000023061	MTREX	100	98.464	ENSSBOG00000026693	MTREX	100	98.464	Saimiri_boliviensis_boliviensis
ENSUAMG00000023061	MTREX	95	95.573	ENSSHAG00000004600	MTREX	99	95.573	Sarcophilus_harrisii
ENSUAMG00000023061	MTREX	100	87.285	ENSSFOG00015014355	skiv2l2	100	87.189	Scleropages_formosus
ENSUAMG00000023061	MTREX	100	82.762	ENSSMAG00000007572	mtrex	100	82.762	Scophthalmus_maximus
ENSUAMG00000023061	MTREX	100	83.588	ENSSDUG00000023789	mtrex	100	83.588	Seriola_dumerili
ENSUAMG00000023061	MTREX	100	83.492	ENSSLDG00000006301	mtrex	100	83.397	Seriola_lalandi_dorsalis
ENSUAMG00000023061	MTREX	100	94.530	ENSSARG00000008387	MTREX	100	94.530	Sorex_araneus
ENSUAMG00000023061	MTREX	100	79.674	ENSSPUG00000007071	MTREX	100	79.885	Sphenodon_punctatus
ENSUAMG00000023061	MTREX	91	87.408	ENSSPAG00000011319	mtrex	94	87.828	Stegastes_partitus
ENSUAMG00000023061	MTREX	100	99.040	ENSSSCG00000016911	MTREX	100	99.040	Sus_scrofa
ENSUAMG00000023061	MTREX	100	89.645	ENSTGUG00000002480	MTREX	100	89.443	Taeniopygia_guttata
ENSUAMG00000023061	MTREX	100	82.592	ENSTRUG00000014571	mtrex	100	82.667	Takifugu_rubripes
ENSUAMG00000023061	MTREX	100	82.246	ENSTBEG00000007769	MTREX	100	82.246	Tupaia_belangeri
ENSUAMG00000023061	MTREX	100	98.560	ENSTTRG00000008678	MTREX	100	98.560	Tursiops_truncatus
ENSUAMG00000023061	MTREX	100	99.234	ENSUMAG00000009373	MTREX	100	99.234	Ursus_maritimus
ENSUAMG00000023061	MTREX	100	87.908	ENSVPAG00000011174	MTREX	100	87.908	Vicugna_pacos
ENSUAMG00000023061	MTREX	100	99.232	ENSVVUG00000021337	MTREX	100	99.232	Vulpes_vulpes
ENSUAMG00000023061	MTREX	100	88.719	ENSXETG00000032798	MTREX	100	88.623	Xenopus_tropicalis
ENSUAMG00000023061	MTREX	100	83.222	ENSXMAG00000004799	mtrex	100	83.095	Xiphophorus_maculatus