EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000023379 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 14284 bases
Position: chrLZNR01000049.1:415224-429507
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000030450	zf-C2H2	PF00096.26	3.9e-31	1	5
ENSUAMP00000030450	zf-C2H2	PF00096.26	3.9e-31	2	5
ENSUAMP00000030450	zf-C2H2	PF00096.26	3.9e-31	3	5
ENSUAMP00000030450	zf-C2H2	PF00096.26	3.9e-31	4	5
ENSUAMP00000030450	zf-C2H2	PF00096.26	3.9e-31	5	5
ENSUAMP00000030450	zf-met	PF12874.7	2.9e-23	1	5
ENSUAMP00000030450	zf-met	PF12874.7	2.9e-23	2	5
ENSUAMP00000030450	zf-met	PF12874.7	2.9e-23	3	5
ENSUAMP00000030450	zf-met	PF12874.7	2.9e-23	4	5
ENSUAMP00000030450	zf-met	PF12874.7	2.9e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000033978	-	4556	-	ENSUAMP00000030450	1283 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000023379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000023379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000023379	-	88	72.464	ENSUAMG00000010113	SALL4	82	72.464
ENSUAMG00000023379	-	62	50.000	ENSUAMG00000027381	-	75	47.273
ENSUAMG00000023379	-	50	47.727	ENSUAMG00000027384	-	85	42.308
ENSUAMG00000023379	-	62	48.936	ENSUAMG00000013694	ZNF234	86	48.936
ENSUAMG00000023379	-	92	63.462	ENSUAMG00000016908	SALL3	90	63.462
ENSUAMG00000023379	-	64	53.061	ENSUAMG00000015472	ZNF236	72	53.061

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000023379	-	92	92.621	ENSG00000103449	SALL1	95	92.791	Homo_sapiens
ENSUAMG00000023379	-	92	67.280	ENSAPOG00000022764	sall1a	90	66.891	Acanthochromis_polyacanthus
ENSUAMG00000023379	-	92	97.445	ENSAMEG00000006817	SALL1	90	97.445	Ailuropoda_melanoleuca
ENSUAMG00000023379	-	92	66.025	ENSACIG00000004231	sall1a	90	65.854	Amphilophus_citrinellus
ENSUAMG00000023379	-	92	67.531	ENSAOCG00000002800	sall1a	90	67.059	Amphiprion_ocellaris
ENSUAMG00000023379	-	92	67.531	ENSAPEG00000010179	sall1a	90	67.143	Amphiprion_percula
ENSUAMG00000023379	-	92	66.695	ENSATEG00000003006	sall1a	90	66.443	Anabas_testudineus
ENSUAMG00000023379	-	92	84.753	ENSAPLG00000003356	SALL1	90	84.838	Anas_platyrhynchos
ENSUAMG00000023379	-	91	79.725	ENSACAG00000014399	SALL1	87	79.639	Anolis_carolinensis
ENSUAMG00000023379	-	92	92.523	ENSANAG00000027238	SALL1	90	92.778	Aotus_nancymaae
ENSUAMG00000023379	-	92	65.750	ENSACLG00000017148	sall1a	90	65.938	Astatotilapia_calliptera
ENSUAMG00000023379	-	92	63.462	ENSAMXG00000017702	sall1b	92	63.462	Astyanax_mexicanus
ENSUAMG00000023379	-	92	67.977	ENSAMXG00000018599	sall1a	90	67.311	Astyanax_mexicanus
ENSUAMG00000023379	-	92	91.830	ENSBTAG00000008544	SALL1	90	91.830	Bos_taurus
ENSUAMG00000023379	-	92	92.523	ENSCJAG00000001740	SALL1	90	92.523	Callithrix_jacchus
ENSUAMG00000023379	-	92	96.014	ENSCAFG00000009755	SALL1	90	96.014	Canis_familiaris
ENSUAMG00000023379	-	92	96.014	ENSCAFG00020002842	SALL1	90	96.014	Canis_lupus_dingo
ENSUAMG00000023379	-	92	91.667	ENSCHIG00000026074	SALL1	90	91.156	Capra_hircus
ENSUAMG00000023379	-	92	93.452	ENSTSYG00000029464	SALL1	90	92.930	Carlito_syrichta
ENSUAMG00000023379	-	90	91.638	ENSCPOG00000006564	SALL1	90	91.638	Cavia_porcellus
ENSUAMG00000023379	-	92	92.511	ENSCCAG00000001639	SALL1	91	92.255	Cebus_capucinus
ENSUAMG00000023379	-	92	93.362	ENSCATG00000004982	SALL1	90	93.191	Cercocebus_atys
ENSUAMG00000023379	-	92	92.249	ENSCLAG00000006380	SALL1	90	92.334	Chinchilla_lanigera
ENSUAMG00000023379	-	92	91.752	ENSCSAG00000005319	SALL1	90	92.177	Chlorocebus_sabaeus
ENSUAMG00000023379	-	69	93.676	ENSCHOG00000000800	-	69	93.676	Choloepus_hoffmanni
ENSUAMG00000023379	-	92	84.412	ENSCPBG00000015924	SALL1	95	84.327	Chrysemys_picta_bellii
ENSUAMG00000023379	-	92	93.362	ENSCANG00000036664	SALL1	90	93.021	Colobus_angolensis_palliatus
ENSUAMG00000023379	-	92	89.438	ENSCGRG00001023314	-	90	89.438	Cricetulus_griseus_chok1gshd
ENSUAMG00000023379	-	90	89.199	ENSCGRG00000009496	Sall1	90	89.199	Cricetulus_griseus_crigri
ENSUAMG00000023379	-	92	64.209	ENSCSEG00000009349	sall1a	90	64.405	Cynoglossus_semilaevis
ENSUAMG00000023379	-	92	66.527	ENSCVAG00000020513	sall1a	99	66.162	Cyprinodon_variegatus
ENSUAMG00000023379	-	92	46.888	ENSDARG00000075891	sall1b	61	52.941	Danio_rerio
ENSUAMG00000023379	-	92	66.833	ENSDARG00000074319	sall1a	90	66.054	Danio_rerio
ENSUAMG00000023379	-	92	90.306	ENSDNOG00000016413	SALL1	90	90.051	Dasypus_novemcinctus
ENSUAMG00000023379	-	90	90.941	ENSETEG00000015150	SALL1	90	90.767	Echinops_telfairi
ENSUAMG00000023379	-	93	47.398	ENSEBUG00000011732	SALL1	90	50.379	Eptatretus_burgeri
ENSUAMG00000023379	-	60	65.385	ENSEBUG00000008798	SALL1	62	65.385	Eptatretus_burgeri
ENSUAMG00000023379	-	92	93.867	ENSEASG00005014602	SALL1	90	93.441	Equus_asinus_asinus
ENSUAMG00000023379	-	93	93.361	ENSECAG00000011334	SALL1	99	92.941	Equus_caballus
ENSUAMG00000023379	-	90	91.659	ENSEEUG00000002014	SALL1	90	90.877	Erinaceus_europaeus
ENSUAMG00000023379	-	93	64.151	ENSELUG00000017774	-	90	64.151	Esox_lucius
ENSUAMG00000023379	-	92	64.980	ENSELUG00000006159	sall1a	91	65.059	Esox_lucius
ENSUAMG00000023379	-	92	93.294	ENSFCAG00000024654	SALL1	90	92.530	Felis_catus
ENSUAMG00000023379	-	92	83.731	ENSFALG00000000074	SALL1	90	83.731	Ficedula_albicollis
ENSUAMG00000023379	-	81	63.830	ENSFHEG00000008424	-	85	63.462	Fundulus_heteroclitus
ENSUAMG00000023379	-	92	65.774	ENSFHEG00000012579	sall1a	90	65.714	Fundulus_heteroclitus
ENSUAMG00000023379	-	89	63.462	ENSGMOG00000013383	-	64	65.957	Gadus_morhua
ENSUAMG00000023379	-	92	66.080	ENSGMOG00000006103	sall1a	90	65.688	Gadus_morhua
ENSUAMG00000023379	-	92	84.668	ENSGALG00000039238	SALL1	90	84.583	Gallus_gallus
ENSUAMG00000023379	-	92	66.134	ENSGAFG00000009964	sall1a	90	65.717	Gambusia_affinis
ENSUAMG00000023379	-	92	65.719	ENSGACG00000016702	sall1a	90	65.436	Gasterosteus_aculeatus
ENSUAMG00000023379	-	92	84.157	ENSGAGG00000013979	SALL1	90	84.072	Gopherus_agassizii
ENSUAMG00000023379	-	92	92.706	ENSGGOG00000000663	SALL1	90	92.791	Gorilla_gorilla
ENSUAMG00000023379	-	92	65.750	ENSHBUG00000022005	sall1a	90	65.938	Haplochromis_burtoni
ENSUAMG00000023379	-	92	91.738	ENSHGLG00000004288	-	90	91.738	Heterocephalus_glaber_female
ENSUAMG00000023379	-	92	91.738	ENSHGLG00100017496	SALL1	90	91.738	Heterocephalus_glaber_male
ENSUAMG00000023379	-	92	64.789	ENSHCOG00000000974	sall1a	90	65.243	Hippocampus_comes
ENSUAMG00000023379	-	92	67.809	ENSIPUG00000016265	SALL1	90	67.534	Ictalurus_punctatus
ENSUAMG00000023379	-	92	56.140	ENSIPUG00000022928	sall1b	90	56.140	Ictalurus_punctatus
ENSUAMG00000023379	-	92	92.092	ENSSTOG00000020885	SALL1	90	91.667	Ictidomys_tridecemlineatus
ENSUAMG00000023379	-	92	66.080	ENSKMAG00000016681	sall1a	90	66.134	Kryptolebias_marmoratus
ENSUAMG00000023379	-	89	71.053	ENSLBEG00000012207	sall1a	85	71.053	Labrus_bergylta
ENSUAMG00000023379	-	92	77.419	ENSLACG00000003556	SALL1	90	77.257	Latimeria_chalumnae
ENSUAMG00000023379	-	91	38.577	ENSLACG00000014018	-	89	38.721	Latimeria_chalumnae
ENSUAMG00000023379	-	92	72.674	ENSLOCG00000007283	sall1b	90	72.255	Lepisosteus_oculatus
ENSUAMG00000023379	-	90	91.384	ENSLAFG00000015251	SALL1	90	90.513	Loxodonta_africana
ENSUAMG00000023379	-	92	92.869	ENSMFAG00000003298	SALL1	90	92.954	Macaca_fascicularis
ENSUAMG00000023379	-	84	92.877	ENSMMUG00000017200	SALL1	89	92.969	Macaca_mulatta
ENSUAMG00000023379	-	84	92.976	ENSMNEG00000034770	SALL1	89	92.884	Macaca_nemestrina
ENSUAMG00000023379	-	92	93.532	ENSMLEG00000036406	SALL1	90	93.191	Mandrillus_leucophaeus
ENSUAMG00000023379	-	92	66.945	ENSMAMG00000004164	sall1a	90	66.527	Mastacembelus_armatus
ENSUAMG00000023379	-	92	65.750	ENSMZEG00005006479	sall1a	90	65.938	Maylandia_zebra
ENSUAMG00000023379	-	90	84.769	ENSMGAG00000004704	SALL1	90	84.682	Meleagris_gallopavo
ENSUAMG00000023379	-	92	88.936	ENSMAUG00000019093	Sall1	93	89.106	Mesocricetus_auratus
ENSUAMG00000023379	-	92	91.652	ENSMICG00000036486	SALL1	90	91.227	Microcebus_murinus
ENSUAMG00000023379	-	92	66.639	ENSMMOG00000016400	sall1a	90	66.415	Mola_mola
ENSUAMG00000023379	-	92	87.905	ENSMODG00000013114	SALL1	90	87.223	Monodelphis_domestica
ENSUAMG00000023379	-	92	66.750	ENSMALG00000013400	sall1a	90	66.583	Monopterus_albus
ENSUAMG00000023379	-	92	88.879	MGP_CAROLIEiJ_G0031362	Sall1	90	88.710	Mus_caroli
ENSUAMG00000023379	-	92	88.550	ENSMUSG00000031665	Sall1	90	88.380	Mus_musculus
ENSUAMG00000023379	-	92	88.390	MGP_PahariEiJ_G0022961	Sall1	90	88.390	Mus_pahari
ENSUAMG00000023379	-	92	88.634	MGP_SPRETEiJ_G0032480	Sall1	90	88.465	Mus_spretus
ENSUAMG00000023379	-	90	94.271	ENSMPUG00000003265	SALL1	86	94.184	Mustela_putorius_furo
ENSUAMG00000023379	-	90	85.579	ENSMLUG00000015541	SALL1	90	84.801	Myotis_lucifugus
ENSUAMG00000023379	-	92	65.750	ENSNBRG00000009307	sall1a	90	65.938	Neolamprologus_brichardi
ENSUAMG00000023379	-	86	100.000	ENSNLEG00000001008	SALL1	88	100.000	Nomascus_leucogenys
ENSUAMG00000023379	-	92	87.819	ENSMEUG00000012206	SALL1	90	86.968	Notamacropus_eugenii
ENSUAMG00000023379	-	78	93.750	ENSOPRG00000005645	SALL1	62	94.264	Ochotona_princeps
ENSUAMG00000023379	-	92	91.993	ENSODEG00000003685	SALL1	90	91.908	Octodon_degus
ENSUAMG00000023379	-	92	66.443	ENSONIG00000002831	sall1a	99	66.190	Oreochromis_niloticus
ENSUAMG00000023379	-	80	82.500	ENSOANG00000013399	SALL1	87	86.383	Ornithorhynchus_anatinus
ENSUAMG00000023379	-	92	65.664	ENSORLG00000013827	sall1a	90	65.604	Oryzias_latipes
ENSUAMG00000023379	-	92	65.581	ENSORLG00020020570	sall1a	90	65.520	Oryzias_latipes_hni
ENSUAMG00000023379	-	92	65.420	ENSORLG00015018830	sall1a	90	65.385	Oryzias_latipes_hsok
ENSUAMG00000023379	-	92	66.052	ENSOMEG00000016043	sall1a	90	65.520	Oryzias_melastigma
ENSUAMG00000023379	-	92	93.015	ENSOGAG00000027316	SALL1	90	92.675	Otolemur_garnettii
ENSUAMG00000023379	-	92	88.370	ENSOARG00000017583	SALL1	85	87.401	Ovis_aries
ENSUAMG00000023379	-	91	91.767	ENSPPAG00000035657	SALL1	90	92.715	Pan_paniscus
ENSUAMG00000023379	-	91	70.017	ENSPPAG00000035136	-	88	70.237	Pan_paniscus
ENSUAMG00000023379	-	92	93.294	ENSPPRG00000023283	SALL1	90	92.530	Panthera_pardus
ENSUAMG00000023379	-	85	96.805	ENSPTIG00000013539	-	96	96.805	Panthera_tigris_altaica
ENSUAMG00000023379	-	92	93.057	ENSPTRG00000008108	SALL1	90	93.027	Pan_troglodytes
ENSUAMG00000023379	-	91	70.413	ENSPTRG00000045256	-	88	70.413	Pan_troglodytes
ENSUAMG00000023379	-	92	93.532	ENSPANG00000024176	SALL1	90	93.191	Papio_anubis
ENSUAMG00000023379	-	92	64.268	ENSPKIG00000005383	-	89	64.207	Paramormyrops_kingsleyae
ENSUAMG00000023379	-	92	65.177	ENSPKIG00000022251	sall1a	90	65.093	Paramormyrops_kingsleyae
ENSUAMG00000023379	-	92	83.986	ENSPSIG00000008582	SALL1	90	83.901	Pelodiscus_sinensis
ENSUAMG00000023379	-	92	63.621	ENSPMGG00000021788	sall1a	90	63.924	Periophthalmus_magnuspinnatus
ENSUAMG00000023379	-	91	65.385	ENSPMAG00000008148	sall1b	89	65.385	Petromyzon_marinus
ENSUAMG00000023379	-	92	88.075	ENSPCIG00000017840	SALL1	90	87.223	Phascolarctos_cinereus
ENSUAMG00000023379	-	89	66.235	ENSPFOG00000015799	sall1a	85	65.917	Poecilia_formosa
ENSUAMG00000023379	-	92	65.941	ENSPLAG00000022539	sall1a	90	65.633	Poecilia_latipinna
ENSUAMG00000023379	-	92	66.109	ENSPMEG00000020894	sall1a	90	65.717	Poecilia_mexicana
ENSUAMG00000023379	-	92	66.275	ENSPREG00000006802	sall1a	90	65.714	Poecilia_reticulata
ENSUAMG00000023379	-	97	89.084	ENSPPYG00000007345	SALL1	99	89.004	Pongo_abelii
ENSUAMG00000023379	-	86	96.341	ENSPCAG00000008162	SALL1	93	96.341	Procavia_capensis
ENSUAMG00000023379	-	92	92.766	ENSPCOG00000028192	SALL1	90	92.589	Propithecus_coquereli
ENSUAMG00000023379	-	72	92.546	ENSPVAG00000015374	SALL1	85	92.546	Pteropus_vampyrus
ENSUAMG00000023379	-	92	65.833	ENSPNYG00000010865	sall1a	90	66.022	Pundamilia_nyererei
ENSUAMG00000023379	-	90	65.957	ENSPNAG00000028248	-	59	65.957	Pygocentrus_nattereri
ENSUAMG00000023379	-	92	65.630	ENSPNAG00000023644	sall1a	90	65.152	Pygocentrus_nattereri
ENSUAMG00000023379	-	92	63.462	ENSPNAG00000007442	sall1b	91	63.462	Pygocentrus_nattereri
ENSUAMG00000023379	-	92	88.435	ENSRNOG00000013907	Sall1	90	88.690	Rattus_norvegicus
ENSUAMG00000023379	-	84	92.864	ENSRBIG00000015707	SALL1	89	93.327	Rhinopithecus_bieti
ENSUAMG00000023379	-	91	91.924	ENSRROG00000035777	SALL1	90	92.268	Rhinopithecus_roxellana
ENSUAMG00000023379	-	92	92.530	ENSSBOG00000032186	SALL1	90	92.699	Saimiri_boliviensis_boliviensis
ENSUAMG00000023379	-	92	87.053	ENSSHAG00000009477	SALL1	90	86.457	Sarcophilus_harrisii
ENSUAMG00000023379	-	92	65.690	ENSSFOG00015020020	sall1a	90	65.690	Scleropages_formosus
ENSUAMG00000023379	-	90	66.154	ENSSFOG00015001590	sall1a	89	66.236	Scleropages_formosus
ENSUAMG00000023379	-	92	66.583	ENSSMAG00000009160	sall1a	90	66.331	Scophthalmus_maximus
ENSUAMG00000023379	-	79	47.222	ENSSDUG00000000748	sall1b	65	53.846	Seriola_dumerili
ENSUAMG00000023379	-	92	67.448	ENSSDUG00000006507	sall1a	90	67.003	Seriola_dumerili
ENSUAMG00000023379	-	58	71.277	ENSSLDG00000014465	-	87	71.277	Seriola_lalandi_dorsalis
ENSUAMG00000023379	-	92	67.531	ENSSLDG00000017721	sall1a	90	67.086	Seriola_lalandi_dorsalis
ENSUAMG00000023379	-	90	91.319	ENSSARG00000000661	SALL1	90	91.319	Sorex_araneus
ENSUAMG00000023379	-	92	84.255	ENSSPUG00000000156	SALL1	90	84.170	Sphenodon_punctatus
ENSUAMG00000023379	-	92	66.973	ENSSPAG00000021615	sall1a	90	66.667	Stegastes_partitus
ENSUAMG00000023379	-	93	91.122	ENSSSCG00000002836	SALL1	97	91.206	Sus_scrofa
ENSUAMG00000023379	-	92	84.242	ENSTGUG00000007514	SALL1	90	84.157	Taeniopygia_guttata
ENSUAMG00000023379	-	92	65.572	ENSTRUG00000008950	sall1a	98	65.236	Takifugu_rubripes
ENSUAMG00000023379	-	92	64.652	ENSTNIG00000004257	sall1a	98	64.148	Tetraodon_nigroviridis
ENSUAMG00000023379	-	93	95.649	ENSVVUG00000019383	-	99	95.649	Vulpes_vulpes
ENSUAMG00000023379	-	92	74.442	ENSXETG00000018417	sall1	90	74.442	Xenopus_tropicalis
ENSUAMG00000023379	-	76	61.538	ENSXETG00000017176	sall2	61	61.538	Xenopus_tropicalis
ENSUAMG00000023379	-	92	66.025	ENSXMAG00000016273	sall1a	90	65.633	Xiphophorus_maculatus