EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSUAMG00000023492 (Gene tree)
Gene ID
-
Gene Symbol
CPSF6
Alias
CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Ursus_americanus
Status
putative
Strand
Minus strand
Length
20746 bases
Position
chrLZNR01003145.1:147774-168519
Accession
13871
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUAMP00000030594RRM_1PF00076.229e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUAMT00000034131CPSF6-2012331-ENSUAMP00000030594499 (aa)-UPI0007A6BFA0
Gene Model
Click here to download ENSUAMG00000023492's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000023492's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSUAMG00000023492CPSF65855.385ENSUAMG00000017809CPSF75756.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUAMG00000023492CPSF66357.246ENSG00000149532CPSF77854.598Homo_sapiens
ENSUAMG00000023492CPSF6100100.000ENSG00000111605CPSF691100.000Homo_sapiens
ENSUAMG00000023492CPSF610097.206ENSAMEG00000011781CPSF69097.206Ailuropoda_melanoleuca
ENSUAMG00000023492CPSF65187.008ENSAOCG00000017865cpsf68581.953Amphiprion_ocellaris
ENSUAMG00000023492CPSF6100100.000ENSANAG00000019240CPSF693100.000Aotus_nancymaae
ENSUAMG00000023492CPSF65852.336ENSANAG00000024635CPSF75752.336Aotus_nancymaae
ENSUAMG00000023492CPSF65890.419ENSAMXG00000016745CPSF66389.091Astyanax_mexicanus
ENSUAMG00000023492CPSF65855.385ENSBTAG00000015263CPSF75755.429Bos_taurus
ENSUAMG00000023492CPSF6100100.000ENSBTAG00000007323CPSF691100.000Bos_taurus
ENSUAMG00000023492CPSF6100100.000ENSCJAG00000001798CPSF691100.000Callithrix_jacchus
ENSUAMG00000023492CPSF66154.872ENSCJAG00000019282CPSF76754.857Callithrix_jacchus
ENSUAMG00000023492CPSF6100100.000ENSCAFG00000000424CPSF69497.600Canis_familiaris
ENSUAMG00000023492CPSF65855.385ENSCAFG00000016152CPSF75756.000Canis_familiaris
ENSUAMG00000023492CPSF65855.385ENSCAFG00020012753CPSF75756.000Canis_lupus_dingo
ENSUAMG00000023492CPSF6100100.000ENSCAFG00020016950CPSF691100.000Canis_lupus_dingo
ENSUAMG00000023492CPSF65855.385ENSCHIG00000014655CPSF75755.429Capra_hircus
ENSUAMG00000023492CPSF6100100.000ENSCHIG00000010792CPSF691100.000Capra_hircus
ENSUAMG00000023492CPSF65855.385ENSTSYG00000010138-5756.000Carlito_syrichta
ENSUAMG00000023492CPSF6100100.000ENSTSYG00000008591CPSF691100.000Carlito_syrichta
ENSUAMG00000023492CPSF65855.385ENSCAPG00000006384CPSF75956.000Cavia_aperea
ENSUAMG00000023492CPSF65855.385ENSCPOG00000009980CPSF75756.000Cavia_porcellus
ENSUAMG00000023492CPSF610099.800ENSCPOG00000015201CPSF69199.800Cavia_porcellus
ENSUAMG00000023492CPSF6100100.000ENSCCAG00000028149CPSF691100.000Cebus_capucinus
ENSUAMG00000023492CPSF65854.872ENSCCAG00000032367CPSF75755.429Cebus_capucinus
ENSUAMG00000023492CPSF66154.872ENSCATG00000042801CPSF76355.429Cercocebus_atys
ENSUAMG00000023492CPSF6100100.000ENSCATG00000039288CPSF691100.000Cercocebus_atys
ENSUAMG00000023492CPSF610099.800ENSCLAG00000010149CPSF69499.800Chinchilla_lanigera
ENSUAMG00000023492CPSF65855.385ENSCLAG00000003174CPSF75755.429Chinchilla_lanigera
ENSUAMG00000023492CPSF66154.872ENSCSAG00000006414CPSF76355.429Chlorocebus_sabaeus
ENSUAMG00000023492CPSF610093.097ENSCSAG00000004232CPSF69193.097Chlorocebus_sabaeus
ENSUAMG00000023492CPSF610097.796ENSCPBG00000013322CPSF69197.796Chrysemys_picta_bellii
ENSUAMG00000023492CPSF6100100.000ENSCANG00000037294CPSF694100.000Colobus_angolensis_palliatus
ENSUAMG00000023492CPSF610099.800ENSCGRG00001018082Cpsf69299.800Cricetulus_griseus_chok1gshd
ENSUAMG00000023492CPSF610099.800ENSCGRG00000016909Cpsf69499.800Cricetulus_griseus_crigri
ENSUAMG00000023492CPSF69480.255ENSCSEG00000008967cpsf68582.166Cynoglossus_semilaevis
ENSUAMG00000023492CPSF65743.299ENSCSEG00000001956CPSF75746.154Cynoglossus_semilaevis
ENSUAMG00000023492CPSF66641.818ENSCVAG00000007392CPSF75144.521Cyprinodon_variegatus
ENSUAMG00000023492CPSF69476.433ENSCVAG00000014857cpsf68578.769Cyprinodon_variegatus
ENSUAMG00000023492CPSF65855.385ENSDNOG00000018517CPSF76755.429Dasypus_novemcinctus
ENSUAMG00000023492CPSF610099.400ENSDNOG00000015292CPSF69199.400Dasypus_novemcinctus
ENSUAMG00000023492CPSF610099.800ENSDORG00000002950Cpsf69299.800Dipodomys_ordii
ENSUAMG00000023492CPSF65854.592ENSETEG00000003765CPSF75756.725Echinops_telfairi
ENSUAMG00000023492CPSF610085.261ENSETEG00000002097CPSF69185.261Echinops_telfairi
ENSUAMG00000023492CPSF65855.385ENSEASG00005008196CPSF75756.000Equus_asinus_asinus
ENSUAMG00000023492CPSF6100100.000ENSEASG00005008066CPSF691100.000Equus_asinus_asinus
ENSUAMG00000023492CPSF6100100.000ENSECAG00000015988CPSF691100.000Equus_caballus
ENSUAMG00000023492CPSF67153.297ENSECAG00000018521CPSF77455.429Equus_caballus
ENSUAMG00000023492CPSF610092.351ENSEEUG00000015039CPSF69492.351Erinaceus_europaeus
ENSUAMG00000023492CPSF610099.800ENSFCAG00000002855CPSF69199.800Felis_catus
ENSUAMG00000023492CPSF67153.297ENSFCAG00000013677CPSF77455.429Felis_catus
ENSUAMG00000023492CPSF610098.000ENSFALG00000010157CPSF69498.000Ficedula_albicollis
ENSUAMG00000023492CPSF65653.763ENSFALG00000011927CPSF76156.395Ficedula_albicollis
ENSUAMG00000023492CPSF69141.401ENSFDAG00000003919CPSF75756.000Fukomys_damarensis
ENSUAMG00000023492CPSF610099.800ENSFDAG00000002281CPSF69099.800Fukomys_damarensis
ENSUAMG00000023492CPSF69472.946ENSFHEG00000019693cpsf68676.152Fundulus_heteroclitus
ENSUAMG00000023492CPSF65855.897ENSGALG00000040962CPSF75056.647Gallus_gallus
ENSUAMG00000023492CPSF610097.796ENSGAGG00000010228CPSF610092.075Gopherus_agassizii
ENSUAMG00000023492CPSF610099.800ENSGGOG00000008211CPSF69199.800Gorilla_gorilla
ENSUAMG00000023492CPSF65284.942ENSHBUG00000005998cpsf68580.679Haplochromis_burtoni
ENSUAMG00000023492CPSF610099.800ENSHGLG00000000792CPSF69199.800Heterocephalus_glaber_female
ENSUAMG00000023492CPSF66155.897ENSHGLG00000019090-6356.000Heterocephalus_glaber_female
ENSUAMG00000023492CPSF610099.800ENSHGLG00100013861CPSF69499.800Heterocephalus_glaber_male
ENSUAMG00000023492CPSF66155.897ENSHGLG00100013933-6356.000Heterocephalus_glaber_male
ENSUAMG00000023492CPSF6100100.000ENSSTOG00000014133CPSF694100.000Ictidomys_tridecemlineatus
ENSUAMG00000023492CPSF65855.385ENSSTOG00000007708CPSF75756.000Ictidomys_tridecemlineatus
ENSUAMG00000023492CPSF66155.385ENSJJAG00000019390Cpsf76356.000Jaculus_jaculus
ENSUAMG00000023492CPSF610099.800ENSJJAG00000014647Cpsf69499.800Jaculus_jaculus
ENSUAMG00000023492CPSF67840.331ENSLBEG00000000947CPSF77036.076Labrus_bergylta
ENSUAMG00000023492CPSF66247.541ENSLACG00000005542CPSF76052.294Latimeria_chalumnae
ENSUAMG00000023492CPSF66392.353ENSLOCG00000016190cpsf65792.353Lepisosteus_oculatus
ENSUAMG00000023492CPSF6100100.000ENSLAFG00000030413CPSF691100.000Loxodonta_africana
ENSUAMG00000023492CPSF65855.897ENSLAFG00000032084CPSF75756.571Loxodonta_africana
ENSUAMG00000023492CPSF6100100.000ENSMFAG00000045318CPSF691100.000Macaca_fascicularis
ENSUAMG00000023492CPSF65854.872ENSMFAG00000001401CPSF75855.429Macaca_fascicularis
ENSUAMG00000023492CPSF66154.872ENSMMUG00000015280CPSF76355.429Macaca_mulatta
ENSUAMG00000023492CPSF610099.800ENSMMUG00000002921CPSF69199.800Macaca_mulatta
ENSUAMG00000023492CPSF6100100.000ENSMNEG00000036311CPSF691100.000Macaca_nemestrina
ENSUAMG00000023492CPSF66154.872ENSMNEG00000029585CPSF76355.429Macaca_nemestrina
ENSUAMG00000023492CPSF65854.872ENSMLEG00000031269CPSF75855.429Mandrillus_leucophaeus
ENSUAMG00000023492CPSF6100100.000ENSMLEG00000003957CPSF694100.000Mandrillus_leucophaeus
ENSUAMG00000023492CPSF65183.465ENSMAMG00000010385cpsf68580.892Mastacembelus_armatus
ENSUAMG00000023492CPSF65284.942ENSMZEG00005007975cpsf68580.679Maylandia_zebra
ENSUAMG00000023492CPSF610094.800ENSMGAG00000010552CPSF69194.800Meleagris_gallopavo
ENSUAMG00000023492CPSF6100100.000ENSMAUG00000013240Cpsf691100.000Mesocricetus_auratus
ENSUAMG00000023492CPSF65855.385ENSMAUG00000013020Cpsf75756.000Mesocricetus_auratus
ENSUAMG00000023492CPSF610099.800ENSMICG00000007385-9199.800Microcebus_murinus
ENSUAMG00000023492CPSF65855.385ENSMICG00000013788CPSF75756.000Microcebus_murinus
ENSUAMG00000023492CPSF65855.385ENSMOCG00000000072Cpsf75756.000Microtus_ochrogaster
ENSUAMG00000023492CPSF610099.800ENSMOCG00000013982Cpsf69199.800Microtus_ochrogaster
ENSUAMG00000023492CPSF610099.198ENSMODG00000007123CPSF69199.198Monodelphis_domestica
ENSUAMG00000023492CPSF65852.284ENSMODG00000020364CPSF75856.250Monodelphis_domestica
ENSUAMG00000023492CPSF67290.155ENSMALG00000014908cpsf66891.525Monopterus_albus
ENSUAMG00000023492CPSF65855.385MGP_CAROLIEiJ_G0022690Cpsf75756.000Mus_caroli
ENSUAMG00000023492CPSF6100100.000MGP_CAROLIEiJ_G0015834Cpsf691100.000Mus_caroli
ENSUAMG00000023492CPSF65855.385ENSMUSG00000034820Cpsf75756.000Mus_musculus
ENSUAMG00000023492CPSF610099.599ENSMUSG00000055531Cpsf69199.599Mus_musculus
ENSUAMG00000023492CPSF65855.385MGP_PahariEiJ_G0014184Cpsf75756.000Mus_pahari
ENSUAMG00000023492CPSF67999.569MGP_PahariEiJ_G0031253Cpsf67799.231Mus_pahari
ENSUAMG00000023492CPSF610099.599MGP_SPRETEiJ_G0016657Cpsf69199.599Mus_spretus
ENSUAMG00000023492CPSF65855.385MGP_SPRETEiJ_G0023604Cpsf75756.000Mus_spretus
ENSUAMG00000023492CPSF610097.600ENSMPUG00000017502CPSF69197.600Mustela_putorius_furo
ENSUAMG00000023492CPSF65854.359ENSMPUG00000014163CPSF75654.857Mustela_putorius_furo
ENSUAMG00000023492CPSF66155.385ENSMLUG00000013278CPSF76356.000Myotis_lucifugus
ENSUAMG00000023492CPSF66494.928ENSMLUG00000028728-8095.122Myotis_lucifugus
ENSUAMG00000023492CPSF610097.600ENSMLUG00000004172-9197.600Myotis_lucifugus
ENSUAMG00000023492CPSF610099.800ENSNGAG00000015901Cpsf69199.800Nannospalax_galili
ENSUAMG00000023492CPSF65855.385ENSNGAG00000005031Cpsf75756.000Nannospalax_galili
ENSUAMG00000023492CPSF65284.942ENSNBRG00000004089cpsf68580.679Neolamprologus_brichardi
ENSUAMG00000023492CPSF6100100.000ENSNLEG00000003798CPSF691100.000Nomascus_leucogenys
ENSUAMG00000023492CPSF65854.872ENSNLEG00000002529CPSF75255.429Nomascus_leucogenys
ENSUAMG00000023492CPSF65853.571ENSMEUG00000002261CPSF75755.814Notamacropus_eugenii
ENSUAMG00000023492CPSF610092.724ENSOPRG00000005199CPSF69492.724Ochotona_princeps
ENSUAMG00000023492CPSF65853.030ENSODEG00000002610CPSF75755.618Octodon_degus
ENSUAMG00000023492CPSF671100.000ENSODEG00000004418-72100.000Octodon_degus
ENSUAMG00000023492CPSF610097.600ENSODEG00000018399-9197.600Octodon_degus
ENSUAMG00000023492CPSF65284.942ENSONIG00000011702cpsf68579.406Oreochromis_niloticus
ENSUAMG00000023492CPSF610093.097ENSOCUG00000013505CPSF69193.097Oryctolagus_cuniculus
ENSUAMG00000023492CPSF69641.916ENSOCUG00000024726CPSF75755.429Oryctolagus_cuniculus
ENSUAMG00000023492CPSF69482.030ENSORLG00000013893cpsf68571.283Oryzias_latipes
ENSUAMG00000023492CPSF66942.391ENSORLG00020012657CPSF75242.391Oryzias_latipes_hni
ENSUAMG00000023492CPSF69482.030ENSORLG00020016593cpsf68571.283Oryzias_latipes_hni
ENSUAMG00000023492CPSF69482.030ENSORLG00015015558cpsf68571.283Oryzias_latipes_hsok
ENSUAMG00000023492CPSF66740.217ENSOMEG00000000539CPSF75140.217Oryzias_melastigma
ENSUAMG00000023492CPSF610097.200ENSOGAG00000031988CPSF69497.200Otolemur_garnettii
ENSUAMG00000023492CPSF65855.385ENSOGAG00000027958CPSF75356.000Otolemur_garnettii
ENSUAMG00000023492CPSF610093.097ENSOARG00000020532CPSF610093.097Ovis_aries
ENSUAMG00000023492CPSF65855.385ENSOARG00000012937CPSF75255.429Ovis_aries
ENSUAMG00000023492CPSF610090.130ENSPPAG00000005301CPSF69290.130Pan_paniscus
ENSUAMG00000023492CPSF65854.872ENSPPAG00000028232CPSF75955.429Pan_paniscus
ENSUAMG00000023492CPSF610099.800ENSPPRG00000021620CPSF69199.800Panthera_pardus
ENSUAMG00000023492CPSF65855.385ENSPPRG00000008538CPSF75756.000Panthera_pardus
ENSUAMG00000023492CPSF65855.385ENSPTIG00000021699CPSF75756.000Panthera_tigris_altaica
ENSUAMG00000023492CPSF610099.800ENSPTIG00000004079CPSF610099.800Panthera_tigris_altaica
ENSUAMG00000023492CPSF610099.800ENSPTRG00000005205CPSF69199.800Pan_troglodytes
ENSUAMG00000023492CPSF65854.872ENSPTRG00000003742CPSF75955.429Pan_troglodytes
ENSUAMG00000023492CPSF6100100.000ENSPANG00000011641CPSF691100.000Papio_anubis
ENSUAMG00000023492CPSF65854.872ENSPANG00000006037CPSF75855.429Papio_anubis
ENSUAMG00000023492CPSF69481.702ENSPKIG00000003081-8582.090Paramormyrops_kingsleyae
ENSUAMG00000023492CPSF65448.598ENSPKIG00000018054CPSF75947.205Paramormyrops_kingsleyae
ENSUAMG00000023492CPSF610099.600ENSPEMG00000007973Cpsf69499.600Peromyscus_maniculatus_bairdii
ENSUAMG00000023492CPSF66155.385ENSPEMG00000012648Cpsf76356.000Peromyscus_maniculatus_bairdii
ENSUAMG00000023492CPSF65852.239ENSPCIG00000002551CPSF76853.552Phascolarctos_cinereus
ENSUAMG00000023492CPSF610099.198ENSPCIG00000019063CPSF69199.198Phascolarctos_cinereus
ENSUAMG00000023492CPSF69478.344ENSPLAG00000005715cpsf68580.591Poecilia_latipinna
ENSUAMG00000023492CPSF69478.344ENSPMEG00000001353cpsf68580.591Poecilia_mexicana
ENSUAMG00000023492CPSF610099.800ENSPPYG00000004756CPSF69199.800Pongo_abelii
ENSUAMG00000023492CPSF65854.872ENSPPYG00000003188CPSF75755.429Pongo_abelii
ENSUAMG00000023492CPSF610093.097ENSPCAG00000011574CPSF69193.097Procavia_capensis
ENSUAMG00000023492CPSF65855.385ENSPCOG00000011976CPSF75756.000Propithecus_coquereli
ENSUAMG00000023492CPSF610099.600ENSPCOG00000024384CPSF69199.600Propithecus_coquereli
ENSUAMG00000023492CPSF65855.385ENSPVAG00000010675CPSF75756.000Pteropus_vampyrus
ENSUAMG00000023492CPSF610092.537ENSPVAG00000015753CPSF69192.537Pteropus_vampyrus
ENSUAMG00000023492CPSF65246.497ENSPNAG00000015073CPSF75546.061Pygocentrus_nattereri
ENSUAMG00000023492CPSF610099.800ENSRNOG00000005927Cpsf69199.800Rattus_norvegicus
ENSUAMG00000023492CPSF66154.872ENSRNOG00000020668Cpsf76355.814Rattus_norvegicus
ENSUAMG00000023492CPSF610099.600ENSRBIG00000042827CPSF69199.600Rhinopithecus_bieti
ENSUAMG00000023492CPSF67152.747ENSRBIG00000031429CPSF77454.857Rhinopithecus_bieti
ENSUAMG00000023492CPSF610099.800ENSRROG00000042758CPSF69199.800Rhinopithecus_roxellana
ENSUAMG00000023492CPSF65854.872ENSRROG00000045009CPSF75755.429Rhinopithecus_roxellana
ENSUAMG00000023492CPSF6100100.000ENSSBOG00000010652CPSF6100100.000Saimiri_boliviensis_boliviensis
ENSUAMG00000023492CPSF65854.872ENSSBOG00000018431CPSF75755.429Saimiri_boliviensis_boliviensis
ENSUAMG00000023492CPSF65854.822ENSSHAG00000011964CPSF75756.395Sarcophilus_harrisii
ENSUAMG00000023492CPSF66847.664ENSSFOG00015010288cpsf76643.846Scleropages_formosus
ENSUAMG00000023492CPSF69482.415ENSSFOG00015015803CPSF68579.618Scleropages_formosus
ENSUAMG00000023492CPSF69478.132ENSSFOG00015001688CPSF67481.277Scleropages_formosus
ENSUAMG00000023492CPSF65183.858ENSSDUG00000005024cpsf68581.529Seriola_dumerili
ENSUAMG00000023492CPSF65183.858ENSSLDG00000009042cpsf68581.529Seriola_lalandi_dorsalis
ENSUAMG00000023492CPSF69399.441ENSSARG00000006743CPSF67999.441Sorex_araneus
ENSUAMG00000023492CPSF69491.784ENSSPUG00000001238CPSF69192.264Sphenodon_punctatus
ENSUAMG00000023492CPSF65856.250ENSSPUG00000019344CPSF75856.977Sphenodon_punctatus
ENSUAMG00000023492CPSF65186.614ENSSPAG00000013906cpsf68581.953Stegastes_partitus
ENSUAMG00000023492CPSF6100100.000ENSSSCG00000038031CPSF610093.097Sus_scrofa
ENSUAMG00000023492CPSF65855.385ENSSSCG00000013083CPSF76755.429Sus_scrofa
ENSUAMG00000023492CPSF65553.333ENSTGUG00000006513CPSF75756.322Taeniopygia_guttata
ENSUAMG00000023492CPSF65080.876ENSTRUG00000016461cpsf68578.344Takifugu_rubripes
ENSUAMG00000023492CPSF65854.872ENSTTRG00000011085CPSF75956.000Tursiops_truncatus
ENSUAMG00000023492CPSF66155.385ENSUMAG00000011825CPSF76356.000Ursus_maritimus
ENSUAMG00000023492CPSF6100100.000ENSUMAG00000020779CPSF6100100.000Ursus_maritimus
ENSUAMG00000023492CPSF610093.097ENSVPAG00000008469CPSF69493.097Vicugna_pacos
ENSUAMG00000023492CPSF610093.097ENSVVUG00000010156-10093.097Vulpes_vulpes
ENSUAMG00000023492CPSF65855.385ENSVVUG00000004939CPSF76755.429Vulpes_vulpes

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