EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000023495 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 40032 bases
Position: chrLZNR01003146.1:33824-73855
Accession: 11101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000030601	ResIII	PF04851.15	8.5e-11	1	1
ENSUAMP00000030601	DEAD	PF00270.29	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000034139	SMARCA5-201	4564	-	ENSUAMP00000030601	1047 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000023495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000023495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000023495	SMARCA5	93	85.965	ENSUAMG00000020201	SMARCA1	91	85.965
ENSUAMG00000023495	SMARCA5	50	42.077	ENSUAMG00000024036	CHD6	71	41.026
ENSUAMG00000023495	SMARCA5	54	42.882	ENSUAMG00000021991	CHD1L	63	43.409
ENSUAMG00000023495	SMARCA5	54	41.554	ENSUAMG00000004198	CHD8	57	42.160

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000023495	SMARCA5	99	98.740	ENSG00000153147	SMARCA5	98	98.740	Homo_sapiens
ENSUAMG00000023495	SMARCA5	99	99.709	ENSAMEG00000009585	SMARCA5	98	99.709	Ailuropoda_melanoleuca
ENSUAMG00000023495	SMARCA5	92	97.020	ENSAPLG00000009206	SMARCA5	99	97.020	Anas_platyrhynchos
ENSUAMG00000023495	SMARCA5	93	96.917	ENSACAG00000003038	SMARCA5	94	96.725	Anolis_carolinensis
ENSUAMG00000023495	SMARCA5	99	98.643	ENSANAG00000019345	SMARCA5	98	99.180	Aotus_nancymaae
ENSUAMG00000023495	SMARCA5	99	98.740	ENSBTAG00000003399	SMARCA5	98	98.740	Bos_taurus
ENSUAMG00000023495	SMARCA5	99	98.837	ENSCJAG00000002735	SMARCA5	98	98.837	Callithrix_jacchus
ENSUAMG00000023495	SMARCA5	99	99.419	ENSCAFG00000007525	SMARCA5	98	99.419	Canis_familiaris
ENSUAMG00000023495	SMARCA5	99	99.424	ENSCAFG00020025641	SMARCA5	99	99.424	Canis_lupus_dingo
ENSUAMG00000023495	SMARCA5	99	97.481	ENSCHIG00000016375	-	98	97.481	Capra_hircus
ENSUAMG00000023495	SMARCA5	99	99.225	ENSCHIG00000013730	-	98	99.225	Capra_hircus
ENSUAMG00000023495	SMARCA5	98	95.530	ENSTSYG00000009954	SMARCA5	98	99.692	Carlito_syrichta
ENSUAMG00000023495	SMARCA5	91	99.051	ENSCAPG00000013747	SMARCA5	93	99.051	Cavia_aperea
ENSUAMG00000023495	SMARCA5	99	97.771	ENSCPOG00000002259	SMARCA5	98	97.771	Cavia_porcellus
ENSUAMG00000023495	SMARCA5	99	98.837	ENSCCAG00000027215	SMARCA5	98	99.283	Cebus_capucinus
ENSUAMG00000023495	SMARCA5	99	98.837	ENSCATG00000044917	SMARCA5	98	98.837	Cercocebus_atys
ENSUAMG00000023495	SMARCA5	93	99.486	ENSCLAG00000006153	SMARCA5	98	99.486	Chinchilla_lanigera
ENSUAMG00000023495	SMARCA5	91	99.473	ENSCSAG00000003448	SMARCA5	98	99.473	Chlorocebus_sabaeus
ENSUAMG00000023495	SMARCA5	89	98.368	ENSCHOG00000011724	SMARCA5	88	98.368	Choloepus_hoffmanni
ENSUAMG00000023495	SMARCA5	95	96.404	ENSCPBG00000027535	SMARCA5	94	98.362	Chrysemys_picta_bellii
ENSUAMG00000023495	SMARCA5	99	98.643	ENSCANG00000041629	SMARCA5	98	98.643	Colobus_angolensis_palliatus
ENSUAMG00000023495	SMARCA5	98	97.868	ENSCGRG00001012719	Smarca5	98	97.868	Cricetulus_griseus_chok1gshd
ENSUAMG00000023495	SMARCA5	94	98.983	ENSCGRG00000001417	Smarca5	97	99.486	Cricetulus_griseus_crigri
ENSUAMG00000023495	SMARCA5	97	95.464	ENSDNOG00000009158	SMARCA5	95	96.092	Dasypus_novemcinctus
ENSUAMG00000023495	SMARCA5	91	90.700	ENSDORG00000003466	Smarca5	98	90.700	Dipodomys_ordii
ENSUAMG00000023495	SMARCA5	91	85.759	ENSEBUG00000014773	SMARCA5	95	85.759	Eptatretus_burgeri
ENSUAMG00000023495	SMARCA5	99	99.225	ENSEASG00005001866	SMARCA5	99	99.642	Equus_asinus_asinus
ENSUAMG00000023495	SMARCA5	99	99.225	ENSECAG00000002676	SMARCA5	98	99.225	Equus_caballus
ENSUAMG00000023495	SMARCA5	93	95.170	ENSEEUG00000013176	SMARCA5	98	95.170	Erinaceus_europaeus
ENSUAMG00000023495	SMARCA5	91	89.662	ENSELUG00000014653	SMARCA5	96	89.662	Esox_lucius
ENSUAMG00000023495	SMARCA5	99	99.709	ENSFCAG00000004544	SMARCA5	98	99.709	Felis_catus
ENSUAMG00000023495	SMARCA5	91	97.579	ENSFALG00000004987	SMARCA5	98	97.579	Ficedula_albicollis
ENSUAMG00000023495	SMARCA5	98	95.801	ENSFDAG00000021016	SMARCA5	98	99.589	Fukomys_damarensis
ENSUAMG00000023495	SMARCA5	98	84.645	ENSGMOG00000007519	SMARCA5	93	88.889	Gadus_morhua
ENSUAMG00000023495	SMARCA5	93	98.049	ENSGALG00000009913	SMARCA5	94	97.651	Gallus_gallus
ENSUAMG00000023495	SMARCA5	91	90.995	ENSGACG00000017238	SMARCA5	93	90.805	Gasterosteus_aculeatus
ENSUAMG00000023495	SMARCA5	95	97.684	ENSGAGG00000019882	SMARCA5	94	98.465	Gopherus_agassizii
ENSUAMG00000023495	SMARCA5	99	98.740	ENSGGOG00000012595	SMARCA5	98	99.383	Gorilla_gorilla
ENSUAMG00000023495	SMARCA5	94	89.383	ENSHGLG00000000317	-	94	89.511	Heterocephalus_glaber_female
ENSUAMG00000023495	SMARCA5	99	97.674	ENSHGLG00000000816	-	98	97.674	Heterocephalus_glaber_female
ENSUAMG00000023495	SMARCA5	95	97.780	ENSHGLG00100018421	-	98	99.486	Heterocephalus_glaber_male
ENSUAMG00000023495	SMARCA5	99	98.838	ENSSTOG00000010683	SMARCA5	98	98.838	Ictidomys_tridecemlineatus
ENSUAMG00000023495	SMARCA5	99	97.674	ENSJJAG00000014965	Smarca5	98	97.674	Jaculus_jaculus
ENSUAMG00000023495	SMARCA5	93	96.182	ENSLACG00000007091	SMARCA5	95	96.182	Latimeria_chalumnae
ENSUAMG00000023495	SMARCA5	93	92.070	ENSLOCG00000008966	SMARCA5	95	92.070	Lepisosteus_oculatus
ENSUAMG00000023495	SMARCA5	99	98.740	ENSLAFG00000007795	SMARCA5	98	98.740	Loxodonta_africana
ENSUAMG00000023495	SMARCA5	99	98.837	ENSMFAG00000043649	SMARCA5	98	98.837	Macaca_fascicularis
ENSUAMG00000023495	SMARCA5	99	98.837	ENSMMUG00000000829	SMARCA5	98	99.061	Macaca_mulatta
ENSUAMG00000023495	SMARCA5	99	98.837	ENSMNEG00000031916	SMARCA5	98	98.837	Macaca_nemestrina
ENSUAMG00000023495	SMARCA5	99	98.837	ENSMLEG00000042393	SMARCA5	98	98.837	Mandrillus_leucophaeus
ENSUAMG00000023495	SMARCA5	94	97.347	ENSMGAG00000003517	SMARCA5	97	97.347	Meleagris_gallopavo
ENSUAMG00000023495	SMARCA5	93	99.589	ENSMAUG00000015902	Smarca5	96	99.589	Mesocricetus_auratus
ENSUAMG00000023495	SMARCA5	99	99.031	ENSMICG00000003971	SMARCA5	98	99.031	Microcebus_murinus
ENSUAMG00000023495	SMARCA5	98	97.578	ENSMOCG00000016986	-	98	97.578	Microtus_ochrogaster
ENSUAMG00000023495	SMARCA5	99	95.942	ENSMODG00000000391	SMARCA5	93	99.080	Monodelphis_domestica
ENSUAMG00000023495	SMARCA5	99	97.965	ENSMUSG00000031715	Smarca5	98	97.965	Mus_musculus
ENSUAMG00000023495	SMARCA5	99	98.159	MGP_PahariEiJ_G0022862	Smarca5	98	98.159	Mus_pahari
ENSUAMG00000023495	SMARCA5	99	99.128	ENSMLUG00000000468	SMARCA5	98	99.128	Myotis_lucifugus
ENSUAMG00000023495	SMARCA5	99	97.868	ENSNGAG00000000441	Smarca5	98	97.868	Nannospalax_galili
ENSUAMG00000023495	SMARCA5	99	98.837	ENSNLEG00000005383	SMARCA5	98	98.837	Nomascus_leucogenys
ENSUAMG00000023495	SMARCA5	87	94.841	ENSMEUG00000001267	SMARCA5	94	94.841	Notamacropus_eugenii
ENSUAMG00000023495	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSUAMG00000023495	SMARCA5	91	99.262	ENSOANG00000013921	SMARCA5	98	99.262	Ornithorhynchus_anatinus
ENSUAMG00000023495	SMARCA5	91	99.684	ENSOCUG00000013042	SMARCA5	98	99.684	Oryctolagus_cuniculus
ENSUAMG00000023495	SMARCA5	99	99.031	ENSOGAG00000009702	SMARCA5	98	99.031	Otolemur_garnettii
ENSUAMG00000023495	SMARCA5	99	99.128	ENSOARG00000010589	SMARCA5	98	99.128	Ovis_aries
ENSUAMG00000023495	SMARCA5	99	98.643	ENSPPAG00000028523	SMARCA5	98	99.383	Pan_paniscus
ENSUAMG00000023495	SMARCA5	96	93.843	ENSPPRG00000004925	SMARCA5	95	94.790	Panthera_pardus
ENSUAMG00000023495	SMARCA5	95	99.798	ENSPTIG00000020959	SMARCA5	95	99.798	Panthera_tigris_altaica
ENSUAMG00000023495	SMARCA5	99	98.643	ENSPTRG00000016472	SMARCA5	98	99.383	Pan_troglodytes
ENSUAMG00000023495	SMARCA5	99	98.837	ENSPANG00000001175	SMARCA5	98	98.837	Papio_anubis
ENSUAMG00000023495	SMARCA5	91	91.300	ENSPKIG00000015699	SMARCA5	96	90.073	Paramormyrops_kingsleyae
ENSUAMG00000023495	SMARCA5	92	91.079	ENSPKIG00000015885	SMARCA5	99	91.318	Paramormyrops_kingsleyae
ENSUAMG00000023495	SMARCA5	93	96.315	ENSPSIG00000004177	SMARCA5	98	96.315	Pelodiscus_sinensis
ENSUAMG00000023495	SMARCA5	90	90.401	ENSPMGG00000012316	SMARCA5	98	90.401	Periophthalmus_magnuspinnatus
ENSUAMG00000023495	SMARCA5	95	97.695	ENSPEMG00000008060	Smarca5	98	97.695	Peromyscus_maniculatus_bairdii
ENSUAMG00000023495	SMARCA5	95	69.970	ENSPMAG00000006011	SMARCA5	78	88.591	Petromyzon_marinus
ENSUAMG00000023495	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSUAMG00000023495	SMARCA5	99	95.468	ENSPCIG00000003926	SMARCA5	94	98.523	Phascolarctos_cinereus
ENSUAMG00000023495	SMARCA5	99	98.740	ENSPPYG00000015091	SMARCA5	98	98.740	Pongo_abelii
ENSUAMG00000023495	SMARCA5	86	90.240	ENSPCAG00000014230	SMARCA5	88	90.769	Procavia_capensis
ENSUAMG00000023495	SMARCA5	99	96.221	ENSPCOG00000026744	SMARCA5	98	96.221	Propithecus_coquereli
ENSUAMG00000023495	SMARCA5	98	98.933	ENSPVAG00000006482	SMARCA5	98	98.933	Pteropus_vampyrus
ENSUAMG00000023495	SMARCA5	95	88.277	ENSPNAG00000027824	SMARCA5	97	90.550	Pygocentrus_nattereri
ENSUAMG00000023495	SMARCA5	93	99.385	ENSRNOG00000018149	Smarca5	98	99.385	Rattus_norvegicus
ENSUAMG00000023495	SMARCA5	99	98.645	ENSRBIG00000044644	SMARCA5	98	98.645	Rhinopithecus_bieti
ENSUAMG00000023495	SMARCA5	99	98.274	ENSRROG00000029591	SMARCA5	98	99.384	Rhinopithecus_roxellana
ENSUAMG00000023495	SMARCA5	99	98.547	ENSSBOG00000036257	SMARCA5	98	98.547	Saimiri_boliviensis_boliviensis
ENSUAMG00000023495	SMARCA5	93	99.178	ENSSHAG00000008464	SMARCA5	98	99.178	Sarcophilus_harrisii
ENSUAMG00000023495	SMARCA5	94	89.980	ENSSFOG00015013252	SMARCA5	96	90.071	Scleropages_formosus
ENSUAMG00000023495	SMARCA5	95	94.990	ENSSPUG00000007604	SMARCA5	97	97.704	Sphenodon_punctatus
ENSUAMG00000023495	SMARCA5	99	98.643	ENSSSCG00000009047	SMARCA5	99	98.693	Sus_scrofa
ENSUAMG00000023495	SMARCA5	94	96.450	ENSTGUG00000002408	SMARCA5	97	96.834	Taeniopygia_guttata
ENSUAMG00000023495	SMARCA5	94	99.797	ENSUMAG00000015324	SMARCA5	95	99.797	Ursus_maritimus
ENSUAMG00000023495	SMARCA5	99	98.740	ENSVPAG00000008982	SMARCA5	98	98.740	Vicugna_pacos
ENSUAMG00000023495	SMARCA5	99	99.612	ENSVVUG00000017473	SMARCA5	99	99.424	Vulpes_vulpes
ENSUAMG00000023495	SMARCA5	95	89.100	ENSXETG00000017566	smarca5	95	93.242	Xenopus_tropicalis