EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000023817 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 7939 bases
Position: chrLZNR01011173.1:123391-131329
Accession: 25512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000031016	PRP38	PF03371.15	1.9e-57	1	1
ENSUAMP00000031017	PRP38	PF03371.15	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000034606	PRPF38B-201	2315	-	ENSUAMP00000031016	549 (aa)	-	-
ENSUAMT00000034607	PRPF38B-202	828	-	ENSUAMP00000031017	179 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000023817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000023817's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000023817	PRPF38B	100	98.361	ENSG00000134186	PRPF38B	100	98.394	Homo_sapiens
ENSUAMG00000023817	PRPF38B	100	97.268	ENSANAG00000028333	PRPF38B	100	97.268	Aotus_nancymaae
ENSUAMG00000023817	PRPF38B	100	85.818	ENSCGRG00001018841	Prpf38b	100	91.455	Cricetulus_griseus_chok1gshd
ENSUAMG00000023817	PRPF38B	83	91.429	ENSCGRG00000002972	Prpf38b	100	90.549	Cricetulus_griseus_crigri
ENSUAMG00000023817	PRPF38B	79	91.514	ENSDORG00000025236	-	97	94.550	Dipodomys_ordii
ENSUAMG00000023817	PRPF38B	100	94.353	ENSEEUG00000014328	PRPF38B	100	92.350	Erinaceus_europaeus
ENSUAMG00000023817	PRPF38B	100	95.628	ENSFDAG00000021009	PRPF38B	100	95.628	Fukomys_damarensis
ENSUAMG00000023817	PRPF38B	100	98.361	ENSGGOG00000011288	PRPF38B	100	98.361	Gorilla_gorilla
ENSUAMG00000023817	PRPF38B	91	89.178	ENSMGAG00000006188	PRPF38B	100	89.980	Meleagris_gallopavo
ENSUAMG00000023817	PRPF38B	100	88.342	ENSMAUG00000019131	Prpf38b	100	90.528	Mesocricetus_auratus
ENSUAMG00000023817	PRPF38B	100	88.889	MGP_CAROLIEiJ_G0025542	Prpf38b	99	95.745	Mus_caroli
ENSUAMG00000023817	PRPF38B	100	89.982	ENSMUSG00000027881	Prpf38b	99	96.809	Mus_musculus
ENSUAMG00000023817	PRPF38B	100	89.617	MGP_PahariEiJ_G0026988	Prpf38b	99	96.809	Mus_pahari
ENSUAMG00000023817	PRPF38B	100	89.071	MGP_SPRETEiJ_G0026492	Prpf38b	99	96.809	Mus_spretus
ENSUAMG00000023817	PRPF38B	100	88.889	ENSNLEG00000030268	-	100	90.528	Nomascus_leucogenys
ENSUAMG00000023817	PRPF38B	100	97.632	ENSNLEG00000001645	-	100	97.632	Nomascus_leucogenys
ENSUAMG00000023817	PRPF38B	100	98.361	ENSPPAG00000001260	PRPF38B	100	98.361	Pan_paniscus
ENSUAMG00000023817	PRPF38B	100	99.089	ENSPPRG00000002116	PRPF38B	100	99.089	Panthera_pardus
ENSUAMG00000023817	PRPF38B	100	98.361	ENSPTRG00000001032	PRPF38B	100	98.361	Pan_troglodytes
ENSUAMG00000023817	PRPF38B	100	98.543	ENSPANG00000007560	PRPF38B	100	98.543	Papio_anubis
ENSUAMG00000023817	PRPF38B	60	94.578	ENSPCIG00000024841	PRPF38B	61	96.677	Phascolarctos_cinereus
ENSUAMG00000023817	PRPF38B	100	97.814	ENSPVAG00000011929	-	100	97.814	Pteropus_vampyrus
ENSUAMG00000023817	PRPF38B	100	96.209	ENSSARG00000012818	-	100	96.209	Sorex_araneus
ENSUAMG00000023817	PRPF38B	85	79.661	ENSTGUG00000004594	-	71	88.754	Taeniopygia_guttata