EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSUAMG00000024460 (Gene tree)
Gene ID
-
Gene Symbol
PABPN1
Alias
OPMD|PAB2|PABP2
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Ursus_americanus
Status
putative
Strand
Minus strand
Length
4930 bases
Position
chrLZNR01002233.1:59105-64034
Accession
8565
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSUAMP00000031953RRM_1PF00076.228.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSUAMT00000035632PABPN1-2012076-ENSUAMP00000031953306 (aa)--
Gene Model
Click here to download ENSUAMG00000024460's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000024460's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSUAMG00000024460PABPN162100.000ENSG00000258643BCL2L2-PABPN157100.000Homo_sapiens
ENSUAMG00000024460PABPN110099.346ENSG00000100836PABPN1100100.000Homo_sapiens
ENSUAMG00000024460PABPN16881.818ENSAPOG00000016425pabpn18682.039Acanthochromis_polyacanthus
ENSUAMG00000024460PABPN162100.000ENSAMEG00000007048BCL2L2-PABPN1100100.000Ailuropoda_melanoleuca
ENSUAMG00000024460PABPN16677.885ENSACIG00000021744pabpn19482.143Amphilophus_citrinellus
ENSUAMG00000024460PABPN16881.818ENSAOCG00000015805pabpn18682.039Amphiprion_ocellaris
ENSUAMG00000024460PABPN16881.818ENSAPEG00000009623pabpn18682.039Amphiprion_percula
ENSUAMG00000024460PABPN16882.297ENSATEG00000020531pabpn18682.524Anabas_testudineus
ENSUAMG00000024460PABPN16688.670ENSACAG00000006185-7487.560Anolis_carolinensis
ENSUAMG00000024460PABPN110090.196ENSANAG00000024513-10090.196Aotus_nancymaae
ENSUAMG00000024460PABPN16677.512ENSACLG00000016374pabpn16680.905Astatotilapia_calliptera
ENSUAMG00000024460PABPN16883.732ENSAMXG00000000452pabpn19483.929Astyanax_mexicanus
ENSUAMG00000024460PABPN19275.177ENSBTAG00000050594-8987.255Bos_taurus
ENSUAMG00000024460PABPN110098.693ENSBTAG00000006884PABPN110098.693Bos_taurus
ENSUAMG00000024460PABPN19276.868ENSBTAG00000053753-7198.429Bos_taurus
ENSUAMG00000024460PABPN110099.346ENSCJAG00000007960-10099.346Callithrix_jacchus
ENSUAMG00000024460PABPN15898.315ENSCJAG00000004407-8998.315Callithrix_jacchus
ENSUAMG00000024460PABPN110096.405ENSCAFG00000011482PABPN110096.405Canis_familiaris
ENSUAMG00000024460PABPN110099.346ENSCAFG00020006651-10099.346Canis_lupus_dingo
ENSUAMG00000024460PABPN110099.346ENSCAFG00020007298-10099.346Canis_lupus_dingo
ENSUAMG00000024460PABPN110099.020ENSCHIG00000012184PABPN110099.020Capra_hircus
ENSUAMG00000024460PABPN162100.000ENSTSYG00000033996BCL2L2-PABPN1100100.000Carlito_syrichta
ENSUAMG00000024460PABPN110097.712ENSCPOG00000025574PABPN110097.712Cavia_porcellus
ENSUAMG00000024460PABPN110099.346ENSCCAG00000033954BCL2L2-PABPN110099.346Cebus_capucinus
ENSUAMG00000024460PABPN110099.346ENSCATG00000038536BCL2L2-PABPN110099.346Cercocebus_atys
ENSUAMG00000024460PABPN16780.000ENSCLAG00000012423PABPN16280.000Chinchilla_lanigera
ENSUAMG00000024460PABPN110097.712ENSCSAG00000016036PABPN110097.712Chlorocebus_sabaeus
ENSUAMG00000024460PABPN16788.293ENSCHOG00000004798BCL2L2-PABPN18888.293Choloepus_hoffmanni
ENSUAMG00000024460PABPN15592.814ENSCPBG00000026060-9492.814Chrysemys_picta_bellii
ENSUAMG00000024460PABPN16562.687ENSCING00000012468-8465.174Ciona_intestinalis
ENSUAMG00000024460PABPN15860.674ENSCSAVG00000002001-9362.275Ciona_savignyi
ENSUAMG00000024460PABPN19682.034ENSCANG00000030980-7483.902Colobus_angolensis_palliatus
ENSUAMG00000024460PABPN162100.000ENSCANG00000009750BCL2L2-PABPN1100100.000Colobus_angolensis_palliatus
ENSUAMG00000024460PABPN110096.732ENSCGRG00001019696Pabpn110099.438Cricetulus_griseus_chok1gshd
ENSUAMG00000024460PABPN15899.438ENSCGRG00000011102Pabpn110099.438Cricetulus_griseus_crigri
ENSUAMG00000024460PABPN16879.907ENSCSEG00000008774pabpn18980.476Cynoglossus_semilaevis
ENSUAMG00000024460PABPN16878.947ENSCVAG00000003152pabpn18681.068Cyprinodon_variegatus
ENSUAMG00000024460PABPN16883.254ENSDARG00000045373pabpn18683.495Danio_rerio
ENSUAMG00000024460PABPN110099.346ENSDNOG00000023682PABPN110099.346Dasypus_novemcinctus
ENSUAMG00000024460PABPN110098.039ENSDORG00000028966-10098.039Dipodomys_ordii
ENSUAMG00000024460PABPN16263.351FBgn0005648Pabp28263.351Drosophila_melanogaster
ENSUAMG00000024460PABPN16379.487ENSEBUG00000002322pabpn18379.897Eptatretus_burgeri
ENSUAMG00000024460PABPN110099.346ENSEASG00005011716PABPN110099.346Equus_asinus_asinus
ENSUAMG00000024460PABPN19999.013ENSECAG00000011652PABPN19999.320Equus_caballus
ENSUAMG00000024460PABPN19390.493ENSEEUG00000012973-7293.365Erinaceus_europaeus
ENSUAMG00000024460PABPN18673.485ENSELUG00000022654pabpn18585.437Esox_lucius
ENSUAMG00000024460PABPN110099.346ENSFCAG00000031922PABPN110099.346Felis_catus
ENSUAMG00000024460PABPN15898.876ENSFDAG00000018381BCL2L2-PABPN110098.876Fukomys_damarensis
ENSUAMG00000024460PABPN16877.033ENSFHEG00000007215pabpn18680.097Fundulus_heteroclitus
ENSUAMG00000024460PABPN16483.249ENSGMOG00000003922pabpn16683.505Gadus_morhua
ENSUAMG00000024460PABPN16389.796ENSGALG00000052930-6090.291Gallus_gallus
ENSUAMG00000024460PABPN16881.905ENSGAFG00000017099pabpn18682.126Gambusia_affinis
ENSUAMG00000024460PABPN18667.754ENSGACG00000002167pabpn18777.982Gasterosteus_aculeatus
ENSUAMG00000024460PABPN19381.818ENSGGOG00000025919-9884.459Gorilla_gorilla
ENSUAMG00000024460PABPN110099.346ENSGGOG00000022683-10099.346Gorilla_gorilla
ENSUAMG00000024460PABPN19277.305ENSGGOG00000039675-7284.536Gorilla_gorilla
ENSUAMG00000024460PABPN16882.297ENSHBUG00000019523pabpn18682.524Haplochromis_burtoni
ENSUAMG00000024460PABPN110097.712ENSHGLG00000002927-10097.712Heterocephalus_glaber_female
ENSUAMG00000024460PABPN15576.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSUAMG00000024460PABPN19274.021ENSHGLG00000018588-7181.429Heterocephalus_glaber_female
ENSUAMG00000024460PABPN19269.751ENSHGLG00100015565-7281.429Heterocephalus_glaber_male
ENSUAMG00000024460PABPN15588.304ENSHGLG00100018935-9488.304Heterocephalus_glaber_male
ENSUAMG00000024460PABPN15899.438ENSHGLG00100006673-10099.438Heterocephalus_glaber_male
ENSUAMG00000024460PABPN16877.885ENSHCOG00000004655pabpn18681.553Hippocampus_comes
ENSUAMG00000024460PABPN16882.775ENSIPUG00000008085PABPN18683.010Ictalurus_punctatus
ENSUAMG00000024460PABPN16481.313ENSIPUG00000000180-8681.313Ictalurus_punctatus
ENSUAMG00000024460PABPN158100.000ENSSTOG00000029847BCL2L2-PABPN1100100.000Ictidomys_tridecemlineatus
ENSUAMG00000024460PABPN158100.000ENSJJAG00000023507Gm20521100100.000Jaculus_jaculus
ENSUAMG00000024460PABPN18369.412ENSKMAG00000018748pabpn18681.643Kryptolebias_marmoratus
ENSUAMG00000024460PABPN16882.297ENSLBEG00000027266pabpn18682.524Labrus_bergylta
ENSUAMG00000024460PABPN15887.640ENSLACG00000000646pabpn17989.444Latimeria_chalumnae
ENSUAMG00000024460PABPN16865.238ENSLOCG00000004694pabpn1l9565.700Lepisosteus_oculatus
ENSUAMG00000024460PABPN18271.315ENSLOCG00000000796pabpn16984.021Lepisosteus_oculatus
ENSUAMG00000024460PABPN162100.000ENSMFAG00000032183BCL2L2-PABPN1100100.000Macaca_fascicularis
ENSUAMG00000024460PABPN19777.926ENSMMUG00000048382-6883.333Macaca_mulatta
ENSUAMG00000024460PABPN162100.000ENSMMUG00000014747BCL2L2-PABPN1100100.000Macaca_mulatta
ENSUAMG00000024460PABPN17482.796ENSMNEG00000035750-9992.908Macaca_nemestrina
ENSUAMG00000024460PABPN110099.346ENSMNEG00000045065BCL2L2-PABPN110099.346Macaca_nemestrina
ENSUAMG00000024460PABPN162100.000ENSMLEG00000043862BCL2L2-PABPN1100100.000Mandrillus_leucophaeus
ENSUAMG00000024460PABPN19773.649ENSMLEG00000034623-9990.780Mandrillus_leucophaeus
ENSUAMG00000024460PABPN18270.635ENSMAMG00000007979pabpn16881.773Mastacembelus_armatus
ENSUAMG00000024460PABPN16482.234ENSMZEG00005011904pabpn16682.474Maylandia_zebra
ENSUAMG00000024460PABPN19896.678ENSMAUG00000007383Gm205219996.678Mesocricetus_auratus
ENSUAMG00000024460PABPN110099.020ENSMICG00000010002BCL2L2-PABPN110099.020Microcebus_murinus
ENSUAMG00000024460PABPN110096.405ENSMOCG00000018557Gm2052110096.405Microtus_ochrogaster
ENSUAMG00000024460PABPN16882.775ENSMMOG00000005405pabpn18683.010Mola_mola
ENSUAMG00000024460PABPN19996.040ENSMODG00000004535-9996.040Monodelphis_domestica
ENSUAMG00000024460PABPN16482.234ENSMALG00000019612pabpn16781.773Monopterus_albus
ENSUAMG00000024460PABPN16297.884MGP_CAROLIEiJ_G0019276Gm205215797.884Mus_caroli
ENSUAMG00000024460PABPN110095.752MGP_CAROLIEiJ_G0019277Pabpn110097.753Mus_caroli
ENSUAMG00000024460PABPN16298.413ENSMUSG00000092232Gm205215798.413Mus_musculus
ENSUAMG00000024460PABPN110096.078ENSMUSG00000022194Pabpn110098.315Mus_musculus
ENSUAMG00000024460PABPN16298.413MGP_PahariEiJ_G0030294Gm205215798.413Mus_pahari
ENSUAMG00000024460PABPN110096.078MGP_PahariEiJ_G0030295Pabpn110098.315Mus_pahari
ENSUAMG00000024460PABPN16298.413MGP_SPRETEiJ_G0020165Gm205215798.413Mus_spretus
ENSUAMG00000024460PABPN110096.078MGP_SPRETEiJ_G0020166Pabpn110098.315Mus_spretus
ENSUAMG00000024460PABPN154100.000ENSMPUG00000006775-99100.000Mustela_putorius_furo
ENSUAMG00000024460PABPN16297.884ENSMLUG00000003800-10097.884Myotis_lucifugus
ENSUAMG00000024460PABPN19288.380ENSMLUG00000012452-7092.958Myotis_lucifugus
ENSUAMG00000024460PABPN19578.621ENSMLUG00000028677-7594.634Myotis_lucifugus
ENSUAMG00000024460PABPN162100.000ENSNGAG00000019529Gm2052157100.000Nannospalax_galili
ENSUAMG00000024460PABPN16482.234ENSNBRG00000023955pabpn19482.143Neolamprologus_brichardi
ENSUAMG00000024460PABPN19775.839ENSNLEG00000030598-7981.991Nomascus_leucogenys
ENSUAMG00000024460PABPN169100.000ENSNLEG00000015007-75100.000Nomascus_leucogenys
ENSUAMG00000024460PABPN110097.712ENSODEG00000002083BCL2L2-PABPN110097.712Octodon_degus
ENSUAMG00000024460PABPN15887.079ENSODEG00000011555-8986.826Octodon_degus
ENSUAMG00000024460PABPN19281.851ENSODEG00000003739-7586.425Octodon_degus
ENSUAMG00000024460PABPN16482.234ENSONIG00000008112pabpn16682.474Oreochromis_niloticus
ENSUAMG00000024460PABPN19996.053ENSOCUG00000016174PABPN110096.053Oryctolagus_cuniculus
ENSUAMG00000024460PABPN16482.741ENSORLG00000027900pabpn18479.902Oryzias_latipes
ENSUAMG00000024460PABPN16184.492ENSORLG00020004681pabpn16782.266Oryzias_latipes_hni
ENSUAMG00000024460PABPN16882.775ENSORLG00015000018pabpn18683.010Oryzias_latipes_hsok
ENSUAMG00000024460PABPN16879.227ENSOMEG00000016618pabpn17279.412Oryzias_melastigma
ENSUAMG00000024460PABPN110099.346ENSOGAG00000008710PABPN110099.346Otolemur_garnettii
ENSUAMG00000024460PABPN162100.000ENSOARG00000019336BCL2L2-PABPN152100.000Ovis_aries
ENSUAMG00000024460PABPN15583.234ENSPPAG00000039421-9383.234Pan_paniscus
ENSUAMG00000024460PABPN162100.000ENSPPAG00000028984BCL2L2-PABPN199100.000Pan_paniscus
ENSUAMG00000024460PABPN110099.346ENSPPRG00000010567PABPN110099.346Panthera_pardus
ENSUAMG00000024460PABPN158100.000ENSPTIG00000001063BCL2L2-PABPN1100100.000Panthera_tigris_altaica
ENSUAMG00000024460PABPN110099.346ENSPTRG00000006167BCL2L210099.346Pan_troglodytes
ENSUAMG00000024460PABPN19272.695ENSPTRG00000047273-9066.548Pan_troglodytes
ENSUAMG00000024460PABPN19778.378ENSPANG00000023326-9992.908Papio_anubis
ENSUAMG00000024460PABPN110099.346ENSPANG00000021100BCL2L2-PABPN110099.346Papio_anubis
ENSUAMG00000024460PABPN16881.818ENSPKIG00000018052pabpn18682.524Paramormyrops_kingsleyae
ENSUAMG00000024460PABPN16463.131ENSPKIG00000008340pabpn1l9263.131Paramormyrops_kingsleyae
ENSUAMG00000024460PABPN16285.789ENSPKIG00000008144-6782.266Paramormyrops_kingsleyae
ENSUAMG00000024460PABPN16481.726ENSPMGG00000022027pabpn16981.959Periophthalmus_magnuspinnatus
ENSUAMG00000024460PABPN110096.732ENSPEMG00000008332Gm2052110096.732Peromyscus_maniculatus_bairdii
ENSUAMG00000024460PABPN15477.778ENSPMAG00000006212pabpn18476.355Petromyzon_marinus
ENSUAMG00000024460PABPN110096.078ENSPCIG00000027751-10096.078Phascolarctos_cinereus
ENSUAMG00000024460PABPN16878.571ENSPFOG00000010351pabpn18680.676Poecilia_formosa
ENSUAMG00000024460PABPN16481.313ENSPLAG00000022696pabpn16880.882Poecilia_latipinna
ENSUAMG00000024460PABPN16878.571ENSPMEG00000020856pabpn18680.676Poecilia_mexicana
ENSUAMG00000024460PABPN16879.048ENSPREG00000011278pabpn18681.159Poecilia_reticulata
ENSUAMG00000024460PABPN19693.537ENSPPYG00000005663PABPN19993.537Pongo_abelii
ENSUAMG00000024460PABPN16885.308ENSPCAG00000005902PABPN17285.308Procavia_capensis
ENSUAMG00000024460PABPN110099.020ENSPCOG00000028047BCL2L2-PABPN110099.020Propithecus_coquereli
ENSUAMG00000024460PABPN110096.405ENSPVAG00000005270PABPN110096.405Pteropus_vampyrus
ENSUAMG00000024460PABPN16882.297ENSPNYG00000013182pabpn18682.524Pundamilia_nyererei
ENSUAMG00000024460PABPN16883.732ENSPNAG00000023526pabpn18683.981Pygocentrus_nattereri
ENSUAMG00000024460PABPN16562.500ENSPNAG00000021666pabpn1l9464.179Pygocentrus_nattereri
ENSUAMG00000024460PABPN110096.405ENSRNOG00000042195Pabpn110096.405Rattus_norvegicus
ENSUAMG00000024460PABPN158100.000ENSRBIG00000040762BCL2L2-PABPN155100.000Rhinopithecus_bieti
ENSUAMG00000024460PABPN19783.000ENSRBIG00000039547-7585.366Rhinopithecus_bieti
ENSUAMG00000024460PABPN19285.357ENSRBIG00000042811-9086.636Rhinopithecus_bieti
ENSUAMG00000024460PABPN158100.000ENSRROG00000045535BCL2L2-PABPN1100100.000Rhinopithecus_roxellana
ENSUAMG00000024460PABPN19982.951ENSRROG00000040409-7585.854Rhinopithecus_roxellana
ENSUAMG00000024460PABPN19282.143ENSRROG00000036409-6782.949Rhinopithecus_roxellana
ENSUAMG00000024460PABPN16293.564ENSSBOG00000026930BCL2L2-PABPN199100.000Saimiri_boliviensis_boliviensis
ENSUAMG00000024460PABPN18765.660ENSSHAG00000007707-8974.408Sarcophilus_harrisii
ENSUAMG00000024460PABPN17187.156ENSSHAG00000014841-8797.354Sarcophilus_harrisii
ENSUAMG00000024460PABPN17177.828ENSSFOG00015012565pabpn19081.553Scleropages_formosus
ENSUAMG00000024460PABPN16860.096ENSSFOG00015015833pabpn1l8763.918Scleropages_formosus
ENSUAMG00000024460PABPN16881.340ENSSFOG00015014718pabpn18682.039Scleropages_formosus
ENSUAMG00000024460PABPN18670.833ENSSMAG00000020157pabpn18682.524Scophthalmus_maximus
ENSUAMG00000024460PABPN16482.234ENSSDUG00000020582pabpn16781.773Seriola_dumerili
ENSUAMG00000024460PABPN16882.297ENSSLDG00000007118pabpn18682.524Seriola_lalandi_dorsalis
ENSUAMG00000024460PABPN15591.617ENSSPUG00000018308-9491.617Sphenodon_punctatus
ENSUAMG00000024460PABPN16882.297ENSSPAG00000021658pabpn18682.524Stegastes_partitus
ENSUAMG00000024460PABPN15855.114ENSSSCG00000038472-9154.491Sus_scrofa
ENSUAMG00000024460PABPN110099.346ENSSSCG00000002023PABPN110099.346Sus_scrofa
ENSUAMG00000024460PABPN17373.543ENSSSCG00000034805-7669.118Sus_scrofa
ENSUAMG00000024460PABPN16882.775ENSTRUG00000023664pabpn18683.010Takifugu_rubripes
ENSUAMG00000024460PABPN16879.524ENSTNIG00000005369pabpn19379.710Tetraodon_nigroviridis
ENSUAMG00000024460PABPN162100.000ENSUMAG00000014288BCL2L2-PABPN157100.000Ursus_maritimus
ENSUAMG00000024460PABPN162100.000ENSVVUG00000019912BCL2L2-PABPN17698.446Vulpes_vulpes
ENSUAMG00000024460PABPN16490.306ENSXETG00000014597pabpn16692.893Xenopus_tropicalis
ENSUAMG00000024460PABPN15768.927ENSXCOG00000005158pabpn18981.579Xiphophorus_couchianus
ENSUAMG00000024460PABPN16879.524ENSXMAG00000006196pabpn18681.643Xiphophorus_maculatus

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