EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000024509 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 51171 bases
Position: chrLZNR01001242.1:347998-399168
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000032053	ResIII	PF04851.15	5.4e-08	1	1
ENSUAMP00000032046	ResIII	PF04851.15	6.2e-08	1	1
ENSUAMP00000032052	ResIII	PF04851.15	6.8e-08	1	1
ENSUAMP00000032051	ResIII	PF04851.15	6.9e-08	1	1
ENSUAMP00000032061	ResIII	PF04851.15	7e-08	1	1
ENSUAMP00000032058	ResIII	PF04851.15	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000035751	CHD5-207	3552	-	ENSUAMP00000032061	1183 (aa)	-	-
ENSUAMT00000035735	CHD5-201	5676	-	ENSUAMP00000032046	1891 (aa)	-	-
ENSUAMT00000035748	CHD5-206	5187	-	ENSUAMP00000032058	1728 (aa)	-	-
ENSUAMT00000035744	CHD5-205	1206	-	ENSUAMP00000032055	401 (aa)	-	-
ENSUAMT00000035742	CHD5-204	5700	-	ENSUAMP00000032053	1899 (aa)	-	-
ENSUAMT00000035740	CHD5-202	5829	-	ENSUAMP00000032051	1942 (aa)	-	-
ENSUAMT00000035741	CHD5-203	5811	-	ENSUAMP00000032052	1936 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000024509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000024509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000024509	CHD5	89	81.643	ENSUAMG00000005475	CHD3	90	84.977
ENSUAMG00000024509	CHD5	57	40.404	ENSUAMG00000024036	CHD6	88	40.691
ENSUAMG00000024509	CHD5	95	80.660	ENSUAMG00000016452	-	95	84.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000024509	CHD5	98	97.068	ENSG00000116254	CHD5	98	97.068	Homo_sapiens
ENSUAMG00000024509	CHD5	98	98.795	ENSAMEG00000009880	CHD5	99	98.795	Ailuropoda_melanoleuca
ENSUAMG00000024509	CHD5	92	88.889	ENSACIG00000012582	chd5	98	78.685	Amphilophus_citrinellus
ENSUAMG00000024509	CHD5	92	88.152	ENSAOCG00000020356	chd5	94	78.740	Amphiprion_ocellaris
ENSUAMG00000024509	CHD5	95	92.453	ENSAPLG00000015475	CHD5	89	92.453	Anas_platyrhynchos
ENSUAMG00000024509	CHD5	95	90.698	ENSACAG00000002441	CHD5	97	83.569	Anolis_carolinensis
ENSUAMG00000024509	CHD5	89	96.747	ENSANAG00000001078	CHD5	91	97.043	Aotus_nancymaae
ENSUAMG00000024509	CHD5	94	76.428	ENSACLG00000003012	chd5	96	76.051	Astatotilapia_calliptera
ENSUAMG00000024509	CHD5	92	79.476	ENSAMXG00000008921	chd5	93	90.367	Astyanax_mexicanus
ENSUAMG00000024509	CHD5	95	96.582	ENSBTAG00000040477	CHD5	99	97.632	Bos_taurus
ENSUAMG00000024509	CHD5	98	96.911	ENSCJAG00000000101	CHD5	98	96.911	Callithrix_jacchus
ENSUAMG00000024509	CHD5	100	95.059	ENSCAFG00000019545	CHD5	99	99.282	Canis_familiaris
ENSUAMG00000024509	CHD5	100	98.249	ENSCAFG00020008689	CHD5	97	98.249	Canis_lupus_dingo
ENSUAMG00000024509	CHD5	98	95.985	ENSCHIG00000015027	CHD5	97	94.427	Capra_hircus
ENSUAMG00000024509	CHD5	99	91.199	ENSTSYG00000033991	CHD5	99	91.559	Carlito_syrichta
ENSUAMG00000024509	CHD5	98	95.236	ENSCAPG00000009294	CHD5	99	95.236	Cavia_aperea
ENSUAMG00000024509	CHD5	98	95.288	ENSCPOG00000025080	CHD5	99	95.288	Cavia_porcellus
ENSUAMG00000024509	CHD5	98	96.806	ENSCCAG00000024756	CHD5	98	96.806	Cebus_capucinus
ENSUAMG00000024509	CHD5	98	96.178	ENSCATG00000043011	CHD5	98	96.178	Cercocebus_atys
ENSUAMG00000024509	CHD5	98	95.550	ENSCLAG00000010589	CHD5	99	95.550	Chinchilla_lanigera
ENSUAMG00000024509	CHD5	98	97.173	ENSCSAG00000000733	CHD5	98	97.173	Chlorocebus_sabaeus
ENSUAMG00000024509	CHD5	93	90.994	ENSCPBG00000019363	CHD5	99	90.884	Chrysemys_picta_bellii
ENSUAMG00000024509	CHD5	98	97.120	ENSCANG00000032302	CHD5	98	97.120	Colobus_angolensis_palliatus
ENSUAMG00000024509	CHD5	90	96.698	ENSCGRG00001011042	Chd5	100	96.698	Cricetulus_griseus_chok1gshd
ENSUAMG00000024509	CHD5	98	94.613	ENSCGRG00000011341	Chd5	99	94.869	Cricetulus_griseus_crigri
ENSUAMG00000024509	CHD5	95	76.995	ENSDARG00000025789	chd4b	96	68.213	Danio_rerio
ENSUAMG00000024509	CHD5	95	90.291	ENSDARG00000105083	chd5	100	79.217	Danio_rerio
ENSUAMG00000024509	CHD5	94	95.631	ENSDNOG00000046342	CHD5	98	91.518	Dasypus_novemcinctus
ENSUAMG00000024509	CHD5	97	95.911	ENSDORG00000005923	Chd5	99	95.607	Dipodomys_ordii
ENSUAMG00000024509	CHD5	99	94.918	ENSEASG00005021464	CHD5	100	93.478	Equus_asinus_asinus
ENSUAMG00000024509	CHD5	99	94.661	ENSECAG00000025043	CHD5	98	98.008	Equus_caballus
ENSUAMG00000024509	CHD5	76	98.592	ENSEEUG00000002772	CHD5	76	98.592	Erinaceus_europaeus
ENSUAMG00000024509	CHD5	92	90.777	ENSELUG00000010742	chd5	90	92.093	Esox_lucius
ENSUAMG00000024509	CHD5	98	98.740	ENSFCAG00000006319	CHD5	98	98.740	Felis_catus
ENSUAMG00000024509	CHD5	97	89.295	ENSFALG00000009740	CHD5	97	88.959	Ficedula_albicollis
ENSUAMG00000024509	CHD5	99	94.447	ENSFDAG00000012881	CHD5	96	94.190	Fukomys_damarensis
ENSUAMG00000024509	CHD5	98	88.602	ENSGALG00000000747	CHD5	97	88.344	Gallus_gallus
ENSUAMG00000024509	CHD5	86	82.549	ENSGACG00000004389	chd5	99	81.212	Gasterosteus_aculeatus
ENSUAMG00000024509	CHD5	95	93.868	ENSGAGG00000001590	CHD5	99	96.117	Gopherus_agassizii
ENSUAMG00000024509	CHD5	98	97.016	ENSGGOG00000000708	CHD5	99	97.016	Gorilla_gorilla
ENSUAMG00000024509	CHD5	94	77.238	ENSHBUG00000013453	chd5	89	86.512	Haplochromis_burtoni
ENSUAMG00000024509	CHD5	98	95.183	ENSHGLG00000018184	CHD5	99	95.488	Heterocephalus_glaber_female
ENSUAMG00000024509	CHD5	97	90.393	ENSHGLG00100013261	CHD5	97	88.027	Heterocephalus_glaber_male
ENSUAMG00000024509	CHD5	92	88.293	ENSIPUG00000005446	chd5	98	79.420	Ictalurus_punctatus
ENSUAMG00000024509	CHD5	100	95.443	ENSSTOG00000002778	CHD5	99	96.263	Ictidomys_tridecemlineatus
ENSUAMG00000024509	CHD5	99	94.633	ENSJJAG00000019072	Chd5	98	95.236	Jaculus_jaculus
ENSUAMG00000024509	CHD5	60	89.552	ENSLACG00000022233	-	99	88.227	Latimeria_chalumnae
ENSUAMG00000024509	CHD5	95	92.718	ENSLOCG00000004944	chd5	95	82.729	Lepisosteus_oculatus
ENSUAMG00000024509	CHD5	98	96.862	ENSLAFG00000006348	CHD5	99	96.862	Loxodonta_africana
ENSUAMG00000024509	CHD5	98	97.173	ENSMFAG00000033993	CHD5	99	97.355	Macaca_fascicularis
ENSUAMG00000024509	CHD5	100	96.071	ENSMMUG00000016838	CHD5	99	96.071	Macaca_mulatta
ENSUAMG00000024509	CHD5	98	97.173	ENSMNEG00000040044	CHD5	98	97.173	Macaca_nemestrina
ENSUAMG00000024509	CHD5	98	93.647	ENSMLEG00000039166	CHD5	99	93.647	Mandrillus_leucophaeus
ENSUAMG00000024509	CHD5	94	76.282	ENSMZEG00005000841	chd5	91	81.402	Maylandia_zebra
ENSUAMG00000024509	CHD5	98	87.971	ENSMGAG00000001055	CHD5	97	88.421	Meleagris_gallopavo
ENSUAMG00000024509	CHD5	98	94.576	ENSMICG00000017862	CHD5	98	94.576	Microcebus_murinus
ENSUAMG00000024509	CHD5	98	94.557	ENSMOCG00000011049	Chd5	98	95.027	Microtus_ochrogaster
ENSUAMG00000024509	CHD5	90	81.096	ENSMODG00000006294	CHD5	77	94.573	Monodelphis_domestica
ENSUAMG00000024509	CHD5	92	87.442	ENSMALG00000002831	chd5	90	87.442	Monopterus_albus
ENSUAMG00000024509	CHD5	98	94.450	MGP_CAROLIEiJ_G0026857	Chd5	98	94.817	Mus_caroli
ENSUAMG00000024509	CHD5	97	95.011	ENSMUSG00000005045	Chd5	98	94.501	Mus_musculus
ENSUAMG00000024509	CHD5	98	94.237	MGP_PahariEiJ_G0029205	Chd5	98	94.759	Mus_pahari
ENSUAMG00000024509	CHD5	97	95.329	MGP_SPRETEiJ_G0027850	Chd5	98	94.866	Mus_spretus
ENSUAMG00000024509	CHD5	98	94.518	ENSMPUG00000007122	CHD5	99	94.518	Mustela_putorius_furo
ENSUAMG00000024509	CHD5	98	94.278	ENSNGAG00000019812	Chd5	96	94.045	Nannospalax_galili
ENSUAMG00000024509	CHD5	98	94.817	ENSNLEG00000010320	CHD5	99	94.607	Nomascus_leucogenys
ENSUAMG00000024509	CHD5	86	90.726	ENSOPRG00000004304	CHD5	86	90.726	Ochotona_princeps
ENSUAMG00000024509	CHD5	99	94.615	ENSODEG00000010262	CHD5	99	95.288	Octodon_degus
ENSUAMG00000024509	CHD5	95	77.754	ENSONIG00000000619	chd5	99	76.564	Oreochromis_niloticus
ENSUAMG00000024509	CHD5	95	85.477	ENSOANG00000001819	CHD5	88	87.179	Ornithorhynchus_anatinus
ENSUAMG00000024509	CHD5	98	94.720	ENSOGAG00000005703	CHD5	98	94.720	Otolemur_garnettii
ENSUAMG00000024509	CHD5	100	95.343	ENSOARG00000013425	CHD5	99	95.343	Ovis_aries
ENSUAMG00000024509	CHD5	98	97.070	ENSPPAG00000034048	CHD5	99	97.070	Pan_paniscus
ENSUAMG00000024509	CHD5	98	98.163	ENSPPRG00000009453	CHD5	98	98.163	Panthera_pardus
ENSUAMG00000024509	CHD5	98	90.702	ENSPTIG00000013926	CHD5	99	90.702	Panthera_tigris_altaica
ENSUAMG00000024509	CHD5	98	97.070	ENSPTRG00000000075	CHD5	98	97.070	Pan_troglodytes
ENSUAMG00000024509	CHD5	98	97.120	ENSPANG00000006765	CHD5	98	97.120	Papio_anubis
ENSUAMG00000024509	CHD5	98	79.457	ENSPKIG00000004282	chd5	98	78.846	Paramormyrops_kingsleyae
ENSUAMG00000024509	CHD5	90	89.464	ENSPSIG00000006414	CHD5	100	83.104	Pelodiscus_sinensis
ENSUAMG00000024509	CHD5	91	95.745	ENSPEMG00000014799	Chd5	99	96.484	Peromyscus_maniculatus_bairdii
ENSUAMG00000024509	CHD5	98	91.832	ENSPCIG00000028310	CHD5	97	91.914	Phascolarctos_cinereus
ENSUAMG00000024509	CHD5	92	87.442	ENSPLAG00000005343	chd5	99	76.492	Poecilia_latipinna
ENSUAMG00000024509	CHD5	98	93.824	ENSPPYG00000001952	CHD5	99	93.691	Pongo_abelii
ENSUAMG00000024509	CHD5	98	97.120	ENSPCOG00000022930	CHD5	98	97.120	Propithecus_coquereli
ENSUAMG00000024509	CHD5	93	84.545	ENSPNYG00000003183	chd5	99	77.584	Pundamilia_nyererei
ENSUAMG00000024509	CHD5	97	95.162	ENSRNOG00000011268	Chd5	99	94.715	Rattus_norvegicus
ENSUAMG00000024509	CHD5	98	93.653	ENSRBIG00000032140	CHD5	96	96.774	Rhinopithecus_bieti
ENSUAMG00000024509	CHD5	98	96.859	ENSRROG00000041146	CHD5	98	96.859	Rhinopithecus_roxellana
ENSUAMG00000024509	CHD5	98	92.842	ENSSBOG00000001955	CHD5	99	97.267	Saimiri_boliviensis_boliviensis
ENSUAMG00000024509	CHD5	92	92.456	ENSSHAG00000018641	CHD5	100	86.340	Sarcophilus_harrisii
ENSUAMG00000024509	CHD5	95	90.291	ENSSFOG00015006296	chd5	90	93.023	Scleropages_formosus
ENSUAMG00000024509	CHD5	92	87.442	ENSSDUG00000017526	chd5	93	91.284	Seriola_dumerili
ENSUAMG00000024509	CHD5	97	85.124	ENSSPUG00000010622	CHD5	98	81.405	Sphenodon_punctatus
ENSUAMG00000024509	CHD5	100	96.386	ENSSSCG00000003366	CHD5	99	97.796	Sus_scrofa
ENSUAMG00000024509	CHD5	94	91.388	ENSTGUG00000002634	-	100	85.153	Taeniopygia_guttata
ENSUAMG00000024509	CHD5	86	81.232	ENSTNIG00000004346	chd5	99	81.569	Tetraodon_nigroviridis
ENSUAMG00000024509	CHD5	98	95.802	ENSTTRG00000010468	CHD5	98	95.802	Tursiops_truncatus
ENSUAMG00000024509	CHD5	99	95.291	ENSUMAG00000024173	CHD5	100	95.291	Ursus_maritimus
ENSUAMG00000024509	CHD5	100	97.169	ENSVVUG00000026480	CHD5	98	98.780	Vulpes_vulpes
ENSUAMG00000024509	CHD5	96	87.124	ENSXETG00000002904	chd5	100	80.362	Xenopus_tropicalis
ENSUAMG00000024509	CHD5	89	79.171	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus