EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000024543 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 16530 bases
Position: chrLZNR01000615.1:119531-136060
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000032266	RRM_5	PF13893.6	7.7e-07	1	1
ENSUAMP00000032266	RRM_1	PF00076.22	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000035966	SAFB-201	2337	-	ENSUAMP00000032266	778 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000024543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000024543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000024543	SAFB	97	82.609	ENSUAMG00000024695	SAFB2	75	82.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000024543	SAFB	100	89.740	ENSG00000160633	SAFB	88	96.324	Homo_sapiens
ENSUAMG00000024543	SAFB	94	96.027	ENSAMEG00000012254	SAFB	79	96.823	Ailuropoda_melanoleuca
ENSUAMG00000024543	SAFB	86	63.889	ENSAPLG00000006355	-	83	62.040	Anas_platyrhynchos
ENSUAMG00000024543	SAFB	90	66.620	ENSAPLG00000005780	-	82	64.056	Anas_platyrhynchos
ENSUAMG00000024543	SAFB	52	60.096	ENSACAG00000016893	-	59	47.835	Anolis_carolinensis
ENSUAMG00000024543	SAFB	99	92.199	ENSANAG00000028821	SAFB	85	90.014	Aotus_nancymaae
ENSUAMG00000024543	SAFB	100	83.632	ENSBTAG00000007875	SAFB	78	88.260	Bos_taurus
ENSUAMG00000024543	SAFB	69	94.424	ENSCJAG00000017081	SAFB	100	94.424	Callithrix_jacchus
ENSUAMG00000024543	SAFB	100	91.176	ENSCAFG00000018803	SAFB	68	96.547	Canis_familiaris
ENSUAMG00000024543	SAFB	100	91.176	ENSCAFG00020018943	SAFB	78	96.547	Canis_lupus_dingo
ENSUAMG00000024543	SAFB	100	90.541	ENSCHIG00000007262	SAFB	78	90.541	Capra_hircus
ENSUAMG00000024543	SAFB	69	79.362	ENSTSYG00000001851	-	100	76.103	Carlito_syrichta
ENSUAMG00000024543	SAFB	100	79.877	ENSCPOG00000026322	SAFB	80	83.687	Cavia_porcellus
ENSUAMG00000024543	SAFB	100	90.424	ENSCCAG00000020193	SAFB	85	90.424	Cebus_capucinus
ENSUAMG00000024543	SAFB	100	90.287	ENSCATG00000029994	SAFB	85	90.287	Cercocebus_atys
ENSUAMG00000024543	SAFB	100	80.524	ENSCLAG00000007734	SAFB	79	86.003	Chinchilla_lanigera
ENSUAMG00000024543	SAFB	100	86.061	ENSCSAG00000009949	SAFB	79	90.411	Chlorocebus_sabaeus
ENSUAMG00000024543	SAFB	82	90.476	ENSCHOG00000003208	SAFB	76	90.476	Choloepus_hoffmanni
ENSUAMG00000024543	SAFB	91	64.256	ENSCPBG00000010928	-	85	62.569	Chrysemys_picta_bellii
ENSUAMG00000024543	SAFB	90	59.890	ENSCPBG00000010936	-	84	60.265	Chrysemys_picta_bellii
ENSUAMG00000024543	SAFB	95	95.025	ENSCANG00000004774	-	84	95.025	Colobus_angolensis_palliatus
ENSUAMG00000024543	SAFB	100	81.378	ENSCANG00000019754	-	78	87.960	Colobus_angolensis_palliatus
ENSUAMG00000024543	SAFB	99	84.038	ENSCGRG00001002254	Safb	79	83.924	Cricetulus_griseus_chok1gshd
ENSUAMG00000024543	SAFB	99	84.038	ENSCGRG00000011529	Safb	81	83.924	Cricetulus_griseus_crigri
ENSUAMG00000024543	SAFB	100	84.674	ENSDNOG00000015746	SAFB	76	89.143	Dasypus_novemcinctus
ENSUAMG00000024543	SAFB	91	80.978	ENSDORG00000016200	Safb	78	81.191	Dipodomys_ordii
ENSUAMG00000024543	SAFB	88	84.286	ENSETEG00000018679	SAFB	63	85.827	Echinops_telfairi
ENSUAMG00000024543	SAFB	99	91.972	ENSEASG00005023019	SAFB	77	92.254	Equus_asinus_asinus
ENSUAMG00000024543	SAFB	99	92.908	ENSECAG00000018659	SAFB	69	92.426	Equus_caballus
ENSUAMG00000024543	SAFB	100	98.649	ENSFCAG00000011835	SAFB	78	98.649	Felis_catus
ENSUAMG00000024543	SAFB	90	66.480	ENSFALG00000013882	-	70	63.904	Ficedula_albicollis
ENSUAMG00000024543	SAFB	90	61.103	ENSFALG00000013881	-	84	60.904	Ficedula_albicollis
ENSUAMG00000024543	SAFB	88	76.617	ENSFDAG00000020306	SAFB	76	81.659	Fukomys_damarensis
ENSUAMG00000024543	SAFB	90	62.311	ENSGALG00000001948	-	77	61.867	Gallus_gallus
ENSUAMG00000024543	SAFB	90	66.713	ENSGALG00000013365	-	77	64.135	Gallus_gallus
ENSUAMG00000024543	SAFB	87	60.653	ENSGAGG00000008424	-	75	61.506	Gopherus_agassizii
ENSUAMG00000024543	SAFB	85	60.178	ENSGAGG00000017702	-	100	58.036	Gopherus_agassizii
ENSUAMG00000024543	SAFB	100	89.466	ENSGGOG00000015109	SAFB	85	89.466	Gorilla_gorilla
ENSUAMG00000024543	SAFB	94	87.399	ENSHGLG00000015883	SAFB	79	87.973	Heterocephalus_glaber_female
ENSUAMG00000024543	SAFB	94	68.043	ENSHGLG00100004228	SAFB	54	83.153	Heterocephalus_glaber_male
ENSUAMG00000024543	SAFB	100	84.519	ENSSTOG00000002783	SAFB	84	89.581	Ictidomys_tridecemlineatus
ENSUAMG00000024543	SAFB	99	84.319	ENSJJAG00000009021	Safb	84	81.950	Jaculus_jaculus
ENSUAMG00000024543	SAFB	60	48.214	ENSLACG00000018090	SAFB	82	53.956	Latimeria_chalumnae
ENSUAMG00000024543	SAFB	89	45.691	ENSLOCG00000003613	safb	51	45.455	Lepisosteus_oculatus
ENSUAMG00000024543	SAFB	89	89.093	ENSLAFG00000003840	SAFB	77	89.235	Loxodonta_africana
ENSUAMG00000024543	SAFB	100	90.287	ENSMFAG00000003885	SAFB	85	90.287	Macaca_fascicularis
ENSUAMG00000024543	SAFB	100	91.865	ENSMMUG00000017970	SAFB	85	90.287	Macaca_mulatta
ENSUAMG00000024543	SAFB	99	89.645	ENSMNEG00000035637	SAFB	84	89.645	Macaca_nemestrina
ENSUAMG00000024543	SAFB	100	84.354	ENSMLEG00000038637	SAFB	81	84.354	Mandrillus_leucophaeus
ENSUAMG00000024543	SAFB	79	58.136	ENSMGAG00000001051	-	76	57.978	Meleagris_gallopavo
ENSUAMG00000024543	SAFB	90	66.292	ENSMGAG00000001101	-	80	64.557	Meleagris_gallopavo
ENSUAMG00000024543	SAFB	62	90.760	ENSMAUG00000005013	Safb	100	90.760	Mesocricetus_auratus
ENSUAMG00000024543	SAFB	82	82.332	ENSMICG00000046795	-	74	77.487	Microcebus_murinus
ENSUAMG00000024543	SAFB	100	87.141	ENSMICG00000008739	-	85	86.183	Microcebus_murinus
ENSUAMG00000024543	SAFB	99	82.933	ENSMOCG00000014040	Safb	79	82.933	Microtus_ochrogaster
ENSUAMG00000024543	SAFB	100	68.828	ENSMODG00000001236	SAFB	77	74.380	Monodelphis_domestica
ENSUAMG00000024543	SAFB	99	84.196	MGP_CAROLIEiJ_G0021780	Safb	78	84.082	Mus_caroli
ENSUAMG00000024543	SAFB	99	84.332	ENSMUSG00000071054	Safb	78	84.218	Mus_musculus
ENSUAMG00000024543	SAFB	99	83.673	MGP_PahariEiJ_G0020769	Safb	78	83.560	Mus_pahari
ENSUAMG00000024543	SAFB	98	92.026	ENSMPUG00000006123	SAFB	74	95.856	Mustela_putorius_furo
ENSUAMG00000024543	SAFB	94	91.096	ENSMLUG00000001081	SAFB	78	91.713	Myotis_lucifugus
ENSUAMG00000024543	SAFB	91	81.250	ENSNGAG00000019882	Safb	78	80.733	Nannospalax_galili
ENSUAMG00000024543	SAFB	95	90.159	ENSNLEG00000013551	SAFB	85	90.159	Nomascus_leucogenys
ENSUAMG00000024543	SAFB	94	82.319	ENSOPRG00000011561	-	85	84.058	Ochotona_princeps
ENSUAMG00000024543	SAFB	100	83.106	ENSODEG00000014838	SAFB	80	86.675	Octodon_degus
ENSUAMG00000024543	SAFB	99	84.932	ENSOCUG00000014628	SAFB	52	84.932	Oryctolagus_cuniculus
ENSUAMG00000024543	SAFB	94	84.218	ENSOGAG00000027769	SAFB	79	86.531	Otolemur_garnettii
ENSUAMG00000024543	SAFB	82	76.672	ENSOARG00000007856	-	81	81.507	Ovis_aries
ENSUAMG00000024543	SAFB	100	79.284	ENSOARG00000007662	-	78	81.077	Ovis_aries
ENSUAMG00000024543	SAFB	100	89.603	ENSPPAG00000035129	SAFB	85	89.603	Pan_paniscus
ENSUAMG00000024543	SAFB	100	98.649	ENSPPRG00000017197	SAFB	78	98.649	Panthera_pardus
ENSUAMG00000024543	SAFB	100	89.603	ENSPTRG00000010335	SAFB	85	89.603	Pan_troglodytes
ENSUAMG00000024543	SAFB	100	90.150	ENSPANG00000007770	SAFB	85	90.150	Papio_anubis
ENSUAMG00000024543	SAFB	100	57.673	ENSPSIG00000011679	-	85	61.060	Pelodiscus_sinensis
ENSUAMG00000024543	SAFB	99	84.815	ENSPEMG00000020428	Safb	78	84.699	Peromyscus_maniculatus_bairdii
ENSUAMG00000024543	SAFB	69	80.812	ENSPCIG00000009504	-	100	80.627	Phascolarctos_cinereus
ENSUAMG00000024543	SAFB	100	85.550	ENSPPYG00000009428	SAFB	79	89.863	Pongo_abelii
ENSUAMG00000024543	SAFB	90	82.841	ENSPCAG00000006475	SAFB	77	84.248	Procavia_capensis
ENSUAMG00000024543	SAFB	100	86.056	ENSPCOG00000014090	SAFB	83	82.744	Propithecus_coquereli
ENSUAMG00000024543	SAFB	99	92.958	ENSPVAG00000004913	SAFB	78	92.958	Pteropus_vampyrus
ENSUAMG00000024543	SAFB	99	83.311	ENSRNOG00000050543	Safb	85	83.731	Rattus_norvegicus
ENSUAMG00000024543	SAFB	89	77.396	ENSRBIG00000042509	SAFB	82	76.748	Rhinopithecus_bieti
ENSUAMG00000024543	SAFB	100	90.150	ENSRROG00000029278	SAFB	85	90.150	Rhinopithecus_roxellana
ENSUAMG00000024543	SAFB	100	90.424	ENSSBOG00000026291	SAFB	85	90.424	Saimiri_boliviensis_boliviensis
ENSUAMG00000024543	SAFB	100	80.843	ENSSARG00000010475	SAFB	84	86.188	Sorex_araneus
ENSUAMG00000024543	SAFB	93	54.670	ENSSPUG00000009747	-	87	57.163	Sphenodon_punctatus
ENSUAMG00000024543	SAFB	100	95.506	ENSSSCG00000013522	SAFB	74	93.836	Sus_scrofa
ENSUAMG00000024543	SAFB	86	66.667	ENSTGUG00000000502	-	76	64.307	Taeniopygia_guttata
ENSUAMG00000024543	SAFB	82	62.121	ENSTGUG00000000489	-	77	62.225	Taeniopygia_guttata
ENSUAMG00000024543	SAFB	66	49.713	ENSTNIG00000015470	safb	52	52.097	Tetraodon_nigroviridis
ENSUAMG00000024543	SAFB	94	90.287	ENSTTRG00000013588	SAFB	78	91.448	Tursiops_truncatus
ENSUAMG00000024543	SAFB	86	100.000	ENSUMAG00000009734	SAFB	72	100.000	Ursus_maritimus
ENSUAMG00000024543	SAFB	70	96.923	ENSVPAG00000012043	SAFB	63	96.923	Vicugna_pacos
ENSUAMG00000024543	SAFB	100	91.176	ENSVVUG00000013720	SAFB	68	96.547	Vulpes_vulpes
ENSUAMG00000024543	SAFB	51	54.478	ENSXETG00000008755	safb	75	55.090	Xenopus_tropicalis