EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000024634 (Gene tree)
Gene ID: -
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 88788 bases
Position: chrLZNR01001601.1:132869-221656
Accession: 12836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000032544	XRN_N	PF03159.18	7.4e-103	1	1
ENSUAMP00000032555	XRN_N	PF03159.18	1.2e-102	1	1
ENSUAMP00000032551	XRN_N	PF03159.18	1.3e-102	1	1
ENSUAMP00000032564	XRN_N	PF03159.18	1.6e-102	1	1
ENSUAMP00000032560	XRN_N	PF03159.18	1.8e-102	1	1
ENSUAMP00000032559	XRN_N	PF03159.18	1.9e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000036283	XRN2-203	2760	-	ENSUAMP00000032555	919 (aa)	-	-
ENSUAMT00000036292	XRN2-206	2445	-	ENSUAMP00000032564	814 (aa)	-	-
ENSUAMT00000036287	XRN2-204	2826	-	ENSUAMP00000032559	941 (aa)	-	-
ENSUAMT00000036279	XRN2-202	2853	-	ENSUAMP00000032551	950 (aa)	-	-
ENSUAMT00000036288	XRN2-205	2724	-	ENSUAMP00000032560	907 (aa)	-	-
ENSUAMT00000036272	XRN2-201	2859	-	ENSUAMP00000032544	952 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000024634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000024634's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000024634	XRN2	76	39.847	ENSUAMG00000001608	XRN1	61	39.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000024634	XRN2	100	98.000	ENSG00000088930	XRN2	100	98.000	Homo_sapiens
ENSUAMG00000024634	XRN2	95	85.645	ENSAPOG00000009818	xrn2	100	70.438	Acanthochromis_polyacanthus
ENSUAMG00000024634	XRN2	100	99.684	ENSAMEG00000012581	XRN2	100	99.684	Ailuropoda_melanoleuca
ENSUAMG00000024634	XRN2	96	82.282	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSUAMG00000024634	XRN2	95	86.131	ENSAOCG00000023632	xrn2	100	70.863	Amphiprion_ocellaris
ENSUAMG00000024634	XRN2	95	86.131	ENSAPEG00000014871	xrn2	100	70.672	Amphiprion_percula
ENSUAMG00000024634	XRN2	95	71.614	ENSATEG00000001273	xrn2	97	70.930	Anabas_testudineus
ENSUAMG00000024634	XRN2	97	83.423	ENSAPLG00000013869	XRN2	99	83.854	Anas_platyrhynchos
ENSUAMG00000024634	XRN2	100	81.056	ENSACAG00000005565	XRN2	100	81.056	Anolis_carolinensis
ENSUAMG00000024634	XRN2	100	97.684	ENSANAG00000020126	XRN2	100	97.684	Aotus_nancymaae
ENSUAMG00000024634	XRN2	93	72.370	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSUAMG00000024634	XRN2	100	71.122	ENSAMXG00000018301	xrn2	100	71.122	Astyanax_mexicanus
ENSUAMG00000024634	XRN2	100	96.425	ENSBTAG00000011304	XRN2	100	96.425	Bos_taurus
ENSUAMG00000024634	XRN2	92	65.952	WBGene00006964	xrn-2	79	65.952	Caenorhabditis_elegans
ENSUAMG00000024634	XRN2	100	97.789	ENSCJAG00000005611	XRN2	100	97.789	Callithrix_jacchus
ENSUAMG00000024634	XRN2	100	99.368	ENSCAFG00000005185	XRN2	100	99.368	Canis_familiaris
ENSUAMG00000024634	XRN2	100	99.368	ENSCAFG00020027479	XRN2	100	99.368	Canis_lupus_dingo
ENSUAMG00000024634	XRN2	100	96.635	ENSCHIG00000006921	XRN2	100	96.635	Capra_hircus
ENSUAMG00000024634	XRN2	100	97.263	ENSTSYG00000008315	XRN2	100	97.263	Carlito_syrichta
ENSUAMG00000024634	XRN2	97	82.309	ENSCAPG00000010773	XRN2	99	82.201	Cavia_aperea
ENSUAMG00000024634	XRN2	100	97.579	ENSCPOG00000009407	XRN2	100	97.579	Cavia_porcellus
ENSUAMG00000024634	XRN2	100	98.316	ENSCATG00000040350	XRN2	100	98.316	Cercocebus_atys
ENSUAMG00000024634	XRN2	100	98.000	ENSCLAG00000013419	XRN2	100	98.000	Chinchilla_lanigera
ENSUAMG00000024634	XRN2	100	98.316	ENSCSAG00000011094	XRN2	100	98.316	Chlorocebus_sabaeus
ENSUAMG00000024634	XRN2	69	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSUAMG00000024634	XRN2	100	84.792	ENSCPBG00000023533	XRN2	100	85.417	Chrysemys_picta_bellii
ENSUAMG00000024634	XRN2	93	57.706	ENSCING00000022336	-	100	60.859	Ciona_intestinalis
ENSUAMG00000024634	XRN2	94	60.948	ENSCSAVG00000011217	-	100	62.023	Ciona_savignyi
ENSUAMG00000024634	XRN2	100	98.316	ENSCANG00000040240	XRN2	100	98.316	Colobus_angolensis_palliatus
ENSUAMG00000024634	XRN2	98	96.448	ENSCGRG00001010676	Xrn2	99	96.448	Cricetulus_griseus_chok1gshd
ENSUAMG00000024634	XRN2	97	95.685	ENSCGRG00000006378	Xrn2	99	95.685	Cricetulus_griseus_crigri
ENSUAMG00000024634	XRN2	55	72.353	ENSCSEG00000005628	xrn2	100	72.441	Cynoglossus_semilaevis
ENSUAMG00000024634	XRN2	96	85.158	ENSCVAG00000018999	xrn2	98	76.952	Cyprinodon_variegatus
ENSUAMG00000024634	XRN2	100	69.918	ENSDARG00000101900	xrn2	96	78.203	Danio_rerio
ENSUAMG00000024634	XRN2	100	97.263	ENSDNOG00000001895	XRN2	100	97.263	Dasypus_novemcinctus
ENSUAMG00000024634	XRN2	100	95.263	ENSDORG00000005434	Xrn2	100	95.263	Dipodomys_ordii
ENSUAMG00000024634	XRN2	94	56.646	FBgn0031868	Rat1	94	54.228	Drosophila_melanogaster
ENSUAMG00000024634	XRN2	98	94.404	ENSETEG00000001740	XRN2	93	94.404	Echinops_telfairi
ENSUAMG00000024634	XRN2	90	83.495	ENSEBUG00000016136	xrn2	91	82.732	Eptatretus_burgeri
ENSUAMG00000024634	XRN2	100	98.105	ENSEASG00005002484	XRN2	100	98.105	Equus_asinus_asinus
ENSUAMG00000024634	XRN2	98	100.000	ENSECAG00000018988	XRN2	100	96.384	Equus_caballus
ENSUAMG00000024634	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSUAMG00000024634	XRN2	97	85.888	ENSELUG00000000552	xrn2	100	70.902	Esox_lucius
ENSUAMG00000024634	XRN2	100	99.368	ENSFCAG00000007970	XRN2	100	99.368	Felis_catus
ENSUAMG00000024634	XRN2	100	82.914	ENSFALG00000004508	XRN2	100	83.333	Ficedula_albicollis
ENSUAMG00000024634	XRN2	100	97.579	ENSFDAG00000016311	XRN2	100	97.579	Fukomys_damarensis
ENSUAMG00000024634	XRN2	50	75.728	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSUAMG00000024634	XRN2	93	71.715	ENSGMOG00000013436	xrn2	100	73.203	Gadus_morhua
ENSUAMG00000024634	XRN2	100	83.141	ENSGALG00000008372	XRN2	100	83.141	Gallus_gallus
ENSUAMG00000024634	XRN2	92	72.326	ENSGAFG00000014284	xrn2	99	74.661	Gambusia_affinis
ENSUAMG00000024634	XRN2	95	72.682	ENSGACG00000011870	xrn2	100	74.819	Gasterosteus_aculeatus
ENSUAMG00000024634	XRN2	100	84.583	ENSGAGG00000004884	XRN2	100	85.208	Gopherus_agassizii
ENSUAMG00000024634	XRN2	100	98.211	ENSGGOG00000013738	XRN2	100	98.211	Gorilla_gorilla
ENSUAMG00000024634	XRN2	50	82.238	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSUAMG00000024634	XRN2	100	96.632	ENSHGLG00000014831	XRN2	100	96.632	Heterocephalus_glaber_female
ENSUAMG00000024634	XRN2	100	96.632	ENSHGLG00100013130	XRN2	100	96.632	Heterocephalus_glaber_male
ENSUAMG00000024634	XRN2	94	85.158	ENSHCOG00000011994	xrn2	99	69.293	Hippocampus_comes
ENSUAMG00000024634	XRN2	100	69.592	ENSIPUG00000006639	xrn2	100	69.592	Ictalurus_punctatus
ENSUAMG00000024634	XRN2	100	98.316	ENSSTOG00000000589	XRN2	100	98.316	Ictidomys_tridecemlineatus
ENSUAMG00000024634	XRN2	100	96.737	ENSJJAG00000022128	Xrn2	100	96.737	Jaculus_jaculus
ENSUAMG00000024634	XRN2	50	86.131	ENSLBEG00000010041	xrn2	100	79.688	Labrus_bergylta
ENSUAMG00000024634	XRN2	92	87.273	ENSLACG00000008307	XRN2	99	80.123	Latimeria_chalumnae
ENSUAMG00000024634	XRN2	99	72.908	ENSLOCG00000016874	xrn2	100	72.908	Lepisosteus_oculatus
ENSUAMG00000024634	XRN2	100	97.158	ENSLAFG00000014624	XRN2	100	97.158	Loxodonta_africana
ENSUAMG00000024634	XRN2	100	98.316	ENSMFAG00000038122	XRN2	100	98.316	Macaca_fascicularis
ENSUAMG00000024634	XRN2	100	98.316	ENSMMUG00000011405	XRN2	100	98.316	Macaca_mulatta
ENSUAMG00000024634	XRN2	100	98.421	ENSMNEG00000040626	XRN2	100	98.421	Macaca_nemestrina
ENSUAMG00000024634	XRN2	100	98.211	ENSMLEG00000041897	XRN2	100	98.211	Mandrillus_leucophaeus
ENSUAMG00000024634	XRN2	98	71.462	ENSMAMG00000008633	xrn2	98	71.279	Mastacembelus_armatus
ENSUAMG00000024634	XRN2	93	74.335	ENSMZEG00005022362	xrn2	97	75.838	Maylandia_zebra
ENSUAMG00000024634	XRN2	99	81.562	ENSMGAG00000003196	XRN2	99	81.562	Meleagris_gallopavo
ENSUAMG00000024634	XRN2	100	96.632	ENSMAUG00000021842	Xrn2	100	96.632	Mesocricetus_auratus
ENSUAMG00000024634	XRN2	100	97.368	ENSMICG00000008126	XRN2	100	97.368	Microcebus_murinus
ENSUAMG00000024634	XRN2	100	96.211	ENSMOCG00000012588	Xrn2	100	96.211	Microtus_ochrogaster
ENSUAMG00000024634	XRN2	94	85.888	ENSMMOG00000017576	xrn2	86	85.888	Mola_mola
ENSUAMG00000024634	XRN2	100	90.947	ENSMODG00000006163	XRN2	100	90.947	Monodelphis_domestica
ENSUAMG00000024634	XRN2	92	72.069	ENSMALG00000011355	xrn2	99	72.360	Monopterus_albus
ENSUAMG00000024634	XRN2	100	95.584	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.584	Mus_caroli
ENSUAMG00000024634	XRN2	100	95.794	ENSMUSG00000027433	Xrn2	100	95.794	Mus_musculus
ENSUAMG00000024634	XRN2	100	95.584	MGP_PahariEiJ_G0025843	Xrn2	100	95.584	Mus_pahari
ENSUAMG00000024634	XRN2	100	95.794	MGP_SPRETEiJ_G0025318	Xrn2	100	95.794	Mus_spretus
ENSUAMG00000024634	XRN2	100	97.725	ENSMPUG00000001198	XRN2	93	97.725	Mustela_putorius_furo
ENSUAMG00000024634	XRN2	100	97.579	ENSMLUG00000001536	XRN2	100	97.579	Myotis_lucifugus
ENSUAMG00000024634	XRN2	100	96.947	ENSNGAG00000018138	Xrn2	100	96.947	Nannospalax_galili
ENSUAMG00000024634	XRN2	95	86.618	ENSNBRG00000008062	xrn2	97	75.926	Neolamprologus_brichardi
ENSUAMG00000024634	XRN2	100	98.211	ENSNLEG00000009991	XRN2	100	98.211	Nomascus_leucogenys
ENSUAMG00000024634	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSUAMG00000024634	XRN2	69	92.857	ENSOPRG00000001397	-	71	92.857	Ochotona_princeps
ENSUAMG00000024634	XRN2	100	97.474	ENSODEG00000010745	-	100	97.474	Octodon_degus
ENSUAMG00000024634	XRN2	98	88.350	ENSODEG00000000860	-	99	88.781	Octodon_degus
ENSUAMG00000024634	XRN2	96	85.888	ENSONIG00000018720	xrn2	100	71.959	Oreochromis_niloticus
ENSUAMG00000024634	XRN2	100	91.282	ENSOANG00000015673	XRN2	100	91.282	Ornithorhynchus_anatinus
ENSUAMG00000024634	XRN2	100	98.316	ENSOCUG00000013468	XRN2	100	98.316	Oryctolagus_cuniculus
ENSUAMG00000024634	XRN2	98	70.405	ENSORLG00000017213	xrn2	97	75.058	Oryzias_latipes
ENSUAMG00000024634	XRN2	98	70.405	ENSORLG00020001824	xrn2	100	70.061	Oryzias_latipes_hni
ENSUAMG00000024634	XRN2	94	86.618	ENSORLG00015019747	xrn2	100	69.857	Oryzias_latipes_hsok
ENSUAMG00000024634	XRN2	94	85.888	ENSOMEG00000019820	xrn2	100	69.340	Oryzias_melastigma
ENSUAMG00000024634	XRN2	100	97.161	ENSOGAG00000001068	XRN2	100	97.161	Otolemur_garnettii
ENSUAMG00000024634	XRN2	97	96.544	ENSOARG00000004443	XRN2	100	96.544	Ovis_aries
ENSUAMG00000024634	XRN2	100	98.211	ENSPPAG00000033549	XRN2	100	98.211	Pan_paniscus
ENSUAMG00000024634	XRN2	100	99.368	ENSPPRG00000008732	XRN2	100	99.368	Panthera_pardus
ENSUAMG00000024634	XRN2	97	99.351	ENSPTIG00000015683	XRN2	97	99.351	Panthera_tigris_altaica
ENSUAMG00000024634	XRN2	100	98.211	ENSPTRG00000013308	XRN2	100	98.211	Pan_troglodytes
ENSUAMG00000024634	XRN2	100	98.316	ENSPANG00000018088	XRN2	100	98.316	Papio_anubis
ENSUAMG00000024634	XRN2	99	78.775	ENSPKIG00000016889	xrn2	100	70.829	Paramormyrops_kingsleyae
ENSUAMG00000024634	XRN2	83	85.938	ENSPSIG00000014666	XRN2	100	87.630	Pelodiscus_sinensis
ENSUAMG00000024634	XRN2	100	96.000	ENSPEMG00000000111	Xrn2	100	96.000	Peromyscus_maniculatus_bairdii
ENSUAMG00000024634	XRN2	100	70.010	ENSPFOG00000004182	xrn2	99	70.290	Poecilia_formosa
ENSUAMG00000024634	XRN2	92	72.907	ENSPLAG00000007351	xrn2	96	74.302	Poecilia_latipinna
ENSUAMG00000024634	XRN2	94	68.226	ENSPMEG00000011798	xrn2	99	69.097	Poecilia_mexicana
ENSUAMG00000024634	XRN2	92	72.791	ENSPREG00000012452	xrn2	99	72.503	Poecilia_reticulata
ENSUAMG00000024634	XRN2	100	97.789	ENSPPYG00000010755	XRN2	100	97.789	Pongo_abelii
ENSUAMG00000024634	XRN2	100	91.282	ENSPCAG00000011191	XRN2	100	91.282	Procavia_capensis
ENSUAMG00000024634	XRN2	100	90.737	ENSPCOG00000016468	XRN2	100	90.737	Propithecus_coquereli
ENSUAMG00000024634	XRN2	93	95.745	ENSPVAG00000004596	XRN2	93	95.745	Pteropus_vampyrus
ENSUAMG00000024634	XRN2	93	72.370	ENSPNYG00000001765	xrn2	97	73.873	Pundamilia_nyererei
ENSUAMG00000024634	XRN2	100	71.093	ENSPNAG00000010956	xrn2	99	71.093	Pygocentrus_nattereri
ENSUAMG00000024634	XRN2	100	96.530	ENSRNOG00000011785	Xrn2	100	96.530	Rattus_norvegicus
ENSUAMG00000024634	XRN2	89	96.699	ENSRBIG00000036193	XRN2	100	98.533	Rhinopithecus_bieti
ENSUAMG00000024634	XRN2	100	98.316	ENSRROG00000044400	XRN2	90	98.316	Rhinopithecus_roxellana
ENSUAMG00000024634	XRN2	74	53.608	YOR048C	RAT1	68	53.589	Saccharomyces_cerevisiae
ENSUAMG00000024634	XRN2	100	98.211	ENSSBOG00000021014	XRN2	100	98.211	Saimiri_boliviensis_boliviensis
ENSUAMG00000024634	XRN2	98	78.993	ENSSFOG00015001091	xrn2	100	72.033	Scleropages_formosus
ENSUAMG00000024634	XRN2	92	73.512	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSUAMG00000024634	XRN2	92	72.338	ENSSDUG00000012802	xrn2	99	72.398	Seriola_dumerili
ENSUAMG00000024634	XRN2	98	70.375	ENSSLDG00000021273	xrn2	100	73.785	Seriola_lalandi_dorsalis
ENSUAMG00000024634	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSUAMG00000024634	XRN2	98	80.064	ENSSPUG00000005485	XRN2	96	80.128	Sphenodon_punctatus
ENSUAMG00000024634	XRN2	95	85.888	ENSSPAG00000016027	xrn2	99	70.522	Stegastes_partitus
ENSUAMG00000024634	XRN2	100	96.421	ENSSSCG00000007109	XRN2	100	96.421	Sus_scrofa
ENSUAMG00000024634	XRN2	100	81.733	ENSTGUG00000007535	XRN2	100	82.150	Taeniopygia_guttata
ENSUAMG00000024634	XRN2	97	84.915	ENSTRUG00000015489	xrn2	100	68.251	Takifugu_rubripes
ENSUAMG00000024634	XRN2	100	71.132	ENSTNIG00000010712	xrn2	100	71.132	Tetraodon_nigroviridis
ENSUAMG00000024634	XRN2	100	97.474	ENSTBEG00000004119	XRN2	100	97.474	Tupaia_belangeri
ENSUAMG00000024634	XRN2	93	98.378	ENSTTRG00000009087	XRN2	93	98.378	Tursiops_truncatus
ENSUAMG00000024634	XRN2	97	99.784	ENSUMAG00000004012	XRN2	95	99.784	Ursus_maritimus
ENSUAMG00000024634	XRN2	85	97.712	ENSVPAG00000010694	XRN2	91	90.178	Vicugna_pacos
ENSUAMG00000024634	XRN2	100	99.474	ENSVVUG00000012178	XRN2	100	99.474	Vulpes_vulpes
ENSUAMG00000024634	XRN2	99	89.781	ENSXETG00000023501	xrn2	100	75.312	Xenopus_tropicalis
ENSUAMG00000024634	XRN2	100	68.345	ENSXMAG00000000242	xrn2	99	74.887	Xiphophorus_maculatus