EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000024736 (Gene tree)
Gene ID: -
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 86127 bases
Position: chrLZNR01002241.1:138662-224788
Accession: 20959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000032526	RRM_1	PF00076.22	2e-09	1	1
ENSUAMP00000032521	RRM_1	PF00076.22	2e-09	1	1
ENSUAMP00000032517	RRM_1	PF00076.22	2.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000036244	SCAF8-202	3837	-	ENSUAMP00000032521	1278 (aa)	-	-
ENSUAMT00000036240	SCAF8-201	4056	-	ENSUAMP00000032517	1351 (aa)	-	-
ENSUAMT00000036249	SCAF8-203	3792	-	ENSUAMP00000032526	1263 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000024736's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000024736's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000024736	SCAF8	99	96.511	ENSG00000213079	SCAF8	100	96.538	Homo_sapiens
ENSUAMG00000024736	SCAF8	86	69.296	ENSAPOG00000015527	SCAF8	77	68.945	Acanthochromis_polyacanthus
ENSUAMG00000024736	SCAF8	99	99.603	ENSAMEG00000007583	SCAF8	100	96.299	Ailuropoda_melanoleuca
ENSUAMG00000024736	SCAF8	86	69.296	ENSAOCG00000002421	SCAF8	76	68.945	Amphiprion_ocellaris
ENSUAMG00000024736	SCAF8	88	66.221	ENSATEG00000006959	SCAF8	97	65.505	Anabas_testudineus
ENSUAMG00000024736	SCAF8	99	79.262	ENSAPLG00000005765	SCAF8	100	78.956	Anas_platyrhynchos
ENSUAMG00000024736	SCAF8	99	74.902	ENSACAG00000005282	SCAF8	100	74.551	Anolis_carolinensis
ENSUAMG00000024736	SCAF8	99	95.718	ENSANAG00000036184	SCAF8	100	95.751	Aotus_nancymaae
ENSUAMG00000024736	SCAF8	86	68.856	ENSACLG00000018828	SCAF8	80	68.389	Astatotilapia_calliptera
ENSUAMG00000024736	SCAF8	99	95.556	ENSBTAG00000031917	SCAF8	100	95.591	Bos_taurus
ENSUAMG00000024736	SCAF8	99	95.480	ENSCJAG00000012631	SCAF8	100	93.810	Callithrix_jacchus
ENSUAMG00000024736	SCAF8	99	98.255	ENSCAFG00000000570	SCAF8	99	98.255	Canis_familiaris
ENSUAMG00000024736	SCAF8	99	98.257	ENSCAFG00020015048	SCAF8	99	98.193	Canis_lupus_dingo
ENSUAMG00000024736	SCAF8	100	95.170	ENSCHIG00000025041	SCAF8	100	95.354	Capra_hircus
ENSUAMG00000024736	SCAF8	99	95.163	ENSTSYG00000010991	SCAF8	98	94.799	Carlito_syrichta
ENSUAMG00000024736	SCAF8	65	97.845	ENSCAPG00000003300	SCAF8	85	97.807	Cavia_aperea
ENSUAMG00000024736	SCAF8	100	86.604	ENSCPOG00000022216	-	100	85.816	Cavia_porcellus
ENSUAMG00000024736	SCAF8	99	95.480	ENSCCAG00000024952	SCAF8	100	95.515	Cebus_capucinus
ENSUAMG00000024736	SCAF8	99	96.273	ENSCATG00000035361	SCAF8	100	96.302	Cercocebus_atys
ENSUAMG00000024736	SCAF8	99	94.132	ENSCLAG00000004910	SCAF8	100	94.132	Chinchilla_lanigera
ENSUAMG00000024736	SCAF8	99	96.431	ENSCSAG00000013430	SCAF8	100	94.892	Chlorocebus_sabaeus
ENSUAMG00000024736	SCAF8	99	76.092	ENSCPBG00000016330	SCAF8	100	75.515	Chrysemys_picta_bellii
ENSUAMG00000024736	SCAF8	99	96.114	ENSCANG00000039499	SCAF8	99	96.139	Colobus_angolensis_palliatus
ENSUAMG00000024736	SCAF8	99	91.515	ENSCGRG00001020167	Scaf8	100	91.581	Cricetulus_griseus_chok1gshd
ENSUAMG00000024736	SCAF8	100	91.377	ENSCGRG00000004120	Scaf8	99	91.442	Cricetulus_griseus_crigri
ENSUAMG00000024736	SCAF8	86	66.585	ENSCSEG00000000043	-	78	67.831	Cynoglossus_semilaevis
ENSUAMG00000024736	SCAF8	82	67.539	ENSCVAG00000000925	SCAF8	77	67.016	Cyprinodon_variegatus
ENSUAMG00000024736	SCAF8	96	89.910	ENSDNOG00000025271	SCAF8	100	93.519	Dasypus_novemcinctus
ENSUAMG00000024736	SCAF8	99	92.338	ENSDORG00000006391	Scaf8	100	92.271	Dipodomys_ordii
ENSUAMG00000024736	SCAF8	99	96.825	ENSEASG00005018879	SCAF8	100	96.774	Equus_asinus_asinus
ENSUAMG00000024736	SCAF8	99	96.905	ENSECAG00000005540	SCAF8	100	96.929	Equus_caballus
ENSUAMG00000024736	SCAF8	86	66.382	ENSELUG00000002779	SCAF8	75	65.983	Esox_lucius
ENSUAMG00000024736	SCAF8	99	97.778	ENSFCAG00000023424	SCAF8	100	97.795	Felis_catus
ENSUAMG00000024736	SCAF8	99	79.294	ENSFALG00000012433	SCAF8	100	79.066	Ficedula_albicollis
ENSUAMG00000024736	SCAF8	99	94.057	ENSFDAG00000010335	SCAF8	99	94.057	Fukomys_damarensis
ENSUAMG00000024736	SCAF8	92	55.132	ENSFHEG00000008284	SCAF8	77	56.112	Fundulus_heteroclitus
ENSUAMG00000024736	SCAF8	80	57.143	ENSGMOG00000018812	SCAF8	77	61.693	Gadus_morhua
ENSUAMG00000024736	SCAF8	99	80.471	ENSGALG00000013635	SCAF8	99	79.517	Gallus_gallus
ENSUAMG00000024736	SCAF8	85	68.944	ENSGAFG00000018033	SCAF8	78	65.644	Gambusia_affinis
ENSUAMG00000024736	SCAF8	93	53.675	ENSGACG00000006909	SCAF8	100	54.664	Gasterosteus_aculeatus
ENSUAMG00000024736	SCAF8	63	73.276	ENSGAGG00000017820	-	88	73.768	Gopherus_agassizii
ENSUAMG00000024736	SCAF8	99	96.352	ENSGGOG00000008645	SCAF8	100	96.381	Gorilla_gorilla
ENSUAMG00000024736	SCAF8	86	68.735	ENSHBUG00000019537	SCAF8	80	68.269	Haplochromis_burtoni
ENSUAMG00000024736	SCAF8	99	94.057	ENSHGLG00000003619	SCAF8	100	94.104	Heterocephalus_glaber_female
ENSUAMG00000024736	SCAF8	99	94.057	ENSHGLG00100004708	SCAF8	100	94.057	Heterocephalus_glaber_male
ENSUAMG00000024736	SCAF8	99	95.246	ENSSTOG00000026043	SCAF8	99	95.246	Ictidomys_tridecemlineatus
ENSUAMG00000024736	SCAF8	99	92.399	ENSJJAG00000020480	Scaf8	100	91.975	Jaculus_jaculus
ENSUAMG00000024736	SCAF8	86	68.575	ENSKMAG00000012767	SCAF8	78	68.231	Kryptolebias_marmoratus
ENSUAMG00000024736	SCAF8	63	77.407	ENSLBEG00000012484	-	59	77.500	Labrus_bergylta
ENSUAMG00000024736	SCAF8	86	78.471	ENSLACG00000001394	SCAF8	99	63.100	Latimeria_chalumnae
ENSUAMG00000024736	SCAF8	99	60.835	ENSLOCG00000016856	SCAF8	100	60.203	Lepisosteus_oculatus
ENSUAMG00000024736	SCAF8	99	93.349	ENSLAFG00000000022	SCAF8	100	93.951	Loxodonta_africana
ENSUAMG00000024736	SCAF8	99	96.431	ENSMFAG00000032738	SCAF8	100	96.459	Macaca_fascicularis
ENSUAMG00000024736	SCAF8	99	96.431	ENSMMUG00000015163	SCAF8	100	96.459	Macaca_mulatta
ENSUAMG00000024736	SCAF8	99	96.431	ENSMNEG00000043466	SCAF8	100	96.459	Macaca_nemestrina
ENSUAMG00000024736	SCAF8	99	96.273	ENSMLEG00000034845	SCAF8	99	96.273	Mandrillus_leucophaeus
ENSUAMG00000024736	SCAF8	83	65.987	ENSMAMG00000009457	SCAF8	76	64.586	Mastacembelus_armatus
ENSUAMG00000024736	SCAF8	86	68.735	ENSMZEG00005005698	SCAF8	80	68.269	Maylandia_zebra
ENSUAMG00000024736	SCAF8	99	80.078	ENSMGAG00000012762	SCAF8	100	79.627	Meleagris_gallopavo
ENSUAMG00000024736	SCAF8	99	90.960	ENSMAUG00000009513	Scaf8	100	90.960	Mesocricetus_auratus
ENSUAMG00000024736	SCAF8	99	95.483	ENSMICG00000028965	SCAF8	100	95.362	Microcebus_murinus
ENSUAMG00000024736	SCAF8	99	91.990	ENSMOCG00000014950	Scaf8	100	92.054	Microtus_ochrogaster
ENSUAMG00000024736	SCAF8	85	64.277	ENSMMOG00000002216	SCAF8	78	62.794	Mola_mola
ENSUAMG00000024736	SCAF8	99	86.846	ENSMODG00000008301	SCAF8	99	86.846	Monodelphis_domestica
ENSUAMG00000024736	SCAF8	87	67.918	ENSMALG00000011584	SCAF8	78	67.904	Monopterus_albus
ENSUAMG00000024736	SCAF8	99	90.794	MGP_CAROLIEiJ_G0021016	Scaf8	100	90.866	Mus_caroli
ENSUAMG00000024736	SCAF8	99	90.952	ENSMUSG00000046201	Scaf8	100	91.024	Mus_musculus
ENSUAMG00000024736	SCAF8	99	91.429	MGP_PahariEiJ_G0023334	Scaf8	100	91.496	Mus_pahari
ENSUAMG00000024736	SCAF8	99	98.254	ENSMPUG00000001974	SCAF8	100	96.669	Mustela_putorius_furo
ENSUAMG00000024736	SCAF8	99	93.968	ENSMLUG00000029190	SCAF8	100	93.543	Myotis_lucifugus
ENSUAMG00000024736	SCAF8	99	92.546	ENSNGAG00000012332	Scaf8	100	92.604	Nannospalax_galili
ENSUAMG00000024736	SCAF8	99	52.521	ENSNBRG00000009067	SCAF8	100	52.900	Neolamprologus_brichardi
ENSUAMG00000024736	SCAF8	99	95.016	ENSNLEG00000015509	SCAF8	99	94.866	Nomascus_leucogenys
ENSUAMG00000024736	SCAF8	70	91.964	ENSOPRG00000018413	-	76	92.632	Ochotona_princeps
ENSUAMG00000024736	SCAF8	99	94.141	ENSODEG00000007296	SCAF8	100	94.187	Octodon_degus
ENSUAMG00000024736	SCAF8	99	55.167	ENSONIG00000008119	SCAF8	100	54.911	Oreochromis_niloticus
ENSUAMG00000024736	SCAF8	99	95.483	ENSOCUG00000026063	SCAF8	99	95.483	Oryctolagus_cuniculus
ENSUAMG00000024736	SCAF8	85	69.202	ENSORLG00000017358	SCAF8	78	69.212	Oryzias_latipes
ENSUAMG00000024736	SCAF8	85	69.327	ENSORLG00020002214	SCAF8	78	69.335	Oryzias_latipes_hni
ENSUAMG00000024736	SCAF8	85	69.451	ENSORLG00015015779	SCAF8	78	69.458	Oryzias_latipes_hsok
ENSUAMG00000024736	SCAF8	85	69.451	ENSOMEG00000015471	SCAF8	77	69.458	Oryzias_melastigma
ENSUAMG00000024736	SCAF8	99	95.876	ENSOGAG00000034223	SCAF8	100	91.551	Otolemur_garnettii
ENSUAMG00000024736	SCAF8	99	95.242	ENSOARG00000004159	SCAF8	100	95.242	Ovis_aries
ENSUAMG00000024736	SCAF8	99	96.355	ENSPPAG00000039826	SCAF8	100	96.381	Pan_paniscus
ENSUAMG00000024736	SCAF8	99	97.778	ENSPPRG00000023175	SCAF8	100	97.795	Panthera_pardus
ENSUAMG00000024736	SCAF8	99	97.778	ENSPTIG00000014836	SCAF8	100	97.702	Panthera_tigris_altaica
ENSUAMG00000024736	SCAF8	99	96.431	ENSPTRG00000018727	SCAF8	100	96.459	Pan_troglodytes
ENSUAMG00000024736	SCAF8	99	96.273	ENSPANG00000017489	SCAF8	100	94.822	Papio_anubis
ENSUAMG00000024736	SCAF8	99	56.765	ENSPKIG00000021212	SCAF8	100	57.089	Paramormyrops_kingsleyae
ENSUAMG00000024736	SCAF8	89	70.122	ENSPSIG00000008614	SCAF8	96	75.931	Pelodiscus_sinensis
ENSUAMG00000024736	SCAF8	99	91.673	ENSPEMG00000010531	Scaf8	100	91.673	Peromyscus_maniculatus_bairdii
ENSUAMG00000024736	SCAF8	99	87.718	ENSPCIG00000001141	SCAF8	100	87.814	Phascolarctos_cinereus
ENSUAMG00000024736	SCAF8	85	69.451	ENSPFOG00000004176	SCAF8	100	55.437	Poecilia_formosa
ENSUAMG00000024736	SCAF8	85	69.451	ENSPLAG00000021432	SCAF8	77	68.966	Poecilia_latipinna
ENSUAMG00000024736	SCAF8	85	69.576	ENSPMEG00000007591	SCAF8	84	68.557	Poecilia_mexicana
ENSUAMG00000024736	SCAF8	85	69.327	ENSPREG00000000652	SCAF8	77	68.842	Poecilia_reticulata
ENSUAMG00000024736	SCAF8	99	94.774	ENSPPYG00000017121	SCAF8	100	94.501	Pongo_abelii
ENSUAMG00000024736	SCAF8	85	97.440	ENSPCAG00000013044	SCAF8	90	97.483	Procavia_capensis
ENSUAMG00000024736	SCAF8	99	95.959	ENSPCOG00000002067	SCAF8	99	95.959	Propithecus_coquereli
ENSUAMG00000024736	SCAF8	98	92.587	ENSPVAG00000005582	SCAF8	100	93.685	Pteropus_vampyrus
ENSUAMG00000024736	SCAF8	86	68.856	ENSPNYG00000007277	SCAF8	80	68.389	Pundamilia_nyererei
ENSUAMG00000024736	SCAF8	86	68.610	ENSPNAG00000024740	SCAF8	82	68.995	Pygocentrus_nattereri
ENSUAMG00000024736	SCAF8	99	91.032	ENSRNOG00000016919	Scaf8	100	91.102	Rattus_norvegicus
ENSUAMG00000024736	SCAF8	99	96.193	ENSRBIG00000035769	SCAF8	100	96.223	Rhinopithecus_bieti
ENSUAMG00000024736	SCAF8	99	96.273	ENSRROG00000013580	SCAF8	100	96.302	Rhinopithecus_roxellana
ENSUAMG00000024736	SCAF8	99	95.638	ENSSBOG00000027023	SCAF8	100	95.673	Saimiri_boliviensis_boliviensis
ENSUAMG00000024736	SCAF8	99	87.094	ENSSHAG00000009915	SCAF8	100	87.196	Sarcophilus_harrisii
ENSUAMG00000024736	SCAF8	99	54.412	ENSSFOG00015009481	SCAF8	61	46.247	Scleropages_formosus
ENSUAMG00000024736	SCAF8	86	68.408	ENSSMAG00000008275	SCAF8	77	67.707	Scophthalmus_maximus
ENSUAMG00000024736	SCAF8	99	77.567	ENSSPUG00000015219	SCAF8	100	77.585	Sphenodon_punctatus
ENSUAMG00000024736	SCAF8	99	96.111	ENSSSCG00000004070	SCAF8	100	96.142	Sus_scrofa
ENSUAMG00000024736	SCAF8	99	80.031	ENSTGUG00000011151	SCAF8	100	80.267	Taeniopygia_guttata
ENSUAMG00000024736	SCAF8	85	67.950	ENSTRUG00000009243	SCAF8	78	68.143	Takifugu_rubripes
ENSUAMG00000024736	SCAF8	91	69.565	ENSTNIG00000016885	SCAF8	100	69.701	Tetraodon_nigroviridis
ENSUAMG00000024736	SCAF8	99	95.714	ENSTTRG00000014538	SCAF8	100	95.714	Tursiops_truncatus
ENSUAMG00000024736	SCAF8	99	99.920	ENSUMAG00000013404	SCAF8	100	99.920	Ursus_maritimus
ENSUAMG00000024736	SCAF8	68	85.116	ENSVPAG00000012465	SCAF8	99	84.642	Vicugna_pacos
ENSUAMG00000024736	SCAF8	99	98.333	ENSVVUG00000007532	SCAF8	100	98.313	Vulpes_vulpes
ENSUAMG00000024736	SCAF8	99	61.532	ENSXETG00000013132	scaf8	99	61.611	Xenopus_tropicalis
ENSUAMG00000024736	SCAF8	85	69.451	ENSXMAG00000019192	SCAF8	78	68.966	Xiphophorus_maculatus