EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000024947 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Plus strand
Length: 15040 bases
Position: chrLZNR01011240.1:139814-154853
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000032691	SMN	PF06003.12	3.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000036425	-	1103	-	ENSUAMP00000032691	273 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000024947's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000024947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000024947	-	67	88.043	ENSG00000172062	SMN1	70	88.043	Homo_sapiens
ENSUAMG00000024947	-	67	88.043	ENSG00000205571	SMN2	70	88.043	Homo_sapiens
ENSUAMG00000024947	-	66	55.801	ENSAPOG00000011324	smn1	54	60.897	Acanthochromis_polyacanthus
ENSUAMG00000024947	-	79	96.774	ENSAMEG00000003316	-	72	96.774	Ailuropoda_melanoleuca
ENSUAMG00000024947	-	57	60.897	ENSACIG00000019772	-	58	60.897	Amphilophus_citrinellus
ENSUAMG00000024947	-	66	56.906	ENSAOCG00000024444	smn1	58	59.412	Amphiprion_ocellaris
ENSUAMG00000024947	-	66	57.459	ENSAPEG00000016504	smn1	58	60.000	Amphiprion_percula
ENSUAMG00000024947	-	68	62.963	ENSACAG00000010017	-	63	67.222	Anolis_carolinensis
ENSUAMG00000024947	-	77	84.286	ENSANAG00000032133	-	61	86.813	Aotus_nancymaae
ENSUAMG00000024947	-	57	64.744	ENSACLG00000007308	smn1	53	64.744	Astatotilapia_calliptera
ENSUAMG00000024947	-	51	53.191	ENSAMXG00000013884	smn1	55	55.769	Astyanax_mexicanus
ENSUAMG00000024947	-	74	86.341	ENSBTAG00000005743	SMN2	63	87.500	Bos_taurus
ENSUAMG00000024947	-	67	88.043	ENSCJAG00000016290	-	70	88.043	Callithrix_jacchus
ENSUAMG00000024947	-	77	92.488	ENSCAFG00000007812	SMN	64	93.478	Canis_familiaris
ENSUAMG00000024947	-	77	92.488	ENSCAFG00020019229	-	59	93.478	Canis_lupus_dingo
ENSUAMG00000024947	-	74	86.829	ENSCHIG00000015559	-	62	87.500	Capra_hircus
ENSUAMG00000024947	-	70	88.542	ENSTSYG00000012058	-	71	89.130	Carlito_syrichta
ENSUAMG00000024947	-	51	75.694	ENSCAPG00000011021	-	75	74.699	Cavia_aperea
ENSUAMG00000024947	-	70	79.487	ENSCPOG00000036973	-	62	80.978	Cavia_porcellus
ENSUAMG00000024947	-	70	79.000	ENSCPOG00000012328	-	64	80.423	Cavia_porcellus
ENSUAMG00000024947	-	67	86.957	ENSCCAG00000018127	-	70	86.957	Cebus_capucinus
ENSUAMG00000024947	-	67	88.043	ENSCATG00000037002	-	70	88.043	Cercocebus_atys
ENSUAMG00000024947	-	68	79.275	ENSCLAG00000000284	-	71	79.894	Chinchilla_lanigera
ENSUAMG00000024947	-	67	88.587	ENSCSAG00000015688	-	62	88.587	Chlorocebus_sabaeus
ENSUAMG00000024947	-	62	90.476	ENSCHOG00000007346	-	67	90.476	Choloepus_hoffmanni
ENSUAMG00000024947	-	72	64.322	ENSCPBG00000010968	-	66	66.860	Chrysemys_picta_bellii
ENSUAMG00000024947	-	67	88.587	ENSCANG00000038242	-	70	88.587	Colobus_angolensis_palliatus
ENSUAMG00000024947	-	77	80.095	ENSCANG00000033324	-	70	84.239	Colobus_angolensis_palliatus
ENSUAMG00000024947	-	70	61.458	ENSCGRG00001016998	-	57	61.413	Cricetulus_griseus_chok1gshd
ENSUAMG00000024947	-	70	84.896	ENSCGRG00001017959	-	63	85.326	Cricetulus_griseus_chok1gshd
ENSUAMG00000024947	-	70	84.896	ENSCGRG00000007698	Smn1	63	85.326	Cricetulus_griseus_crigri
ENSUAMG00000024947	-	70	50.259	ENSCSEG00000015227	smn1	54	58.861	Cynoglossus_semilaevis
ENSUAMG00000024947	-	59	57.576	ENSCVAG00000007498	smn1	58	57.576	Cyprinodon_variegatus
ENSUAMG00000024947	-	66	47.895	ENSDARG00000018494	smn1	66	50.000	Danio_rerio
ENSUAMG00000024947	-	78	75.701	ENSDNOG00000045949	-	76	75.410	Dasypus_novemcinctus
ENSUAMG00000024947	-	53	87.586	ENSDNOG00000007283	-	60	87.586	Dasypus_novemcinctus
ENSUAMG00000024947	-	67	73.770	ENSDORG00000007082	Smn1	62	73.770	Dipodomys_ordii
ENSUAMG00000024947	-	76	73.913	ENSETEG00000001406	-	89	71.739	Echinops_telfairi
ENSUAMG00000024947	-	51	44.079	ENSEBUG00000011902	smn1	52	44.079	Eptatretus_burgeri
ENSUAMG00000024947	-	71	75.000	ENSEASG00005018000	-	61	80.791	Equus_asinus_asinus
ENSUAMG00000024947	-	70	90.104	ENSECAG00000015215	-	63	90.164	Equus_caballus
ENSUAMG00000024947	-	62	85.119	ENSEEUG00000015777	-	68	85.119	Erinaceus_europaeus
ENSUAMG00000024947	-	69	54.315	ENSELUG00000018067	smn1	56	58.491	Esox_lucius
ENSUAMG00000024947	-	71	92.746	ENSFCAG00000028292	SMN	71	92.973	Felis_catus
ENSUAMG00000024947	-	68	62.105	ENSFALG00000012320	-	59	64.286	Ficedula_albicollis
ENSUAMG00000024947	-	77	77.523	ENSFDAG00000017683	-	64	79.365	Fukomys_damarensis
ENSUAMG00000024947	-	66	55.307	ENSFHEG00000018508	smn1	55	60.000	Fundulus_heteroclitus
ENSUAMG00000024947	-	65	50.543	ENSGMOG00000017279	smn1	63	51.111	Gadus_morhua
ENSUAMG00000024947	-	68	62.963	ENSGALG00000002430	SMN	63	64.205	Gallus_gallus
ENSUAMG00000024947	-	57	60.897	ENSGAFG00000009501	smn1	59	60.256	Gambusia_affinis
ENSUAMG00000024947	-	70	55.497	ENSGACG00000010584	smn1	58	59.281	Gasterosteus_aculeatus
ENSUAMG00000024947	-	66	36.434	ENSGAGG00000013639	-	56	48.485	Gopherus_agassizii
ENSUAMG00000024947	-	70	64.583	ENSGAGG00000011374	-	65	67.033	Gopherus_agassizii
ENSUAMG00000024947	-	67	88.043	ENSGGOG00000003872	-	74	88.043	Gorilla_gorilla
ENSUAMG00000024947	-	74	87.624	ENSGGOG00000026704	-	86	88.043	Gorilla_gorilla
ENSUAMG00000024947	-	57	64.744	ENSHBUG00000013987	smn1	54	64.744	Haplochromis_burtoni
ENSUAMG00000024947	-	76	78.605	ENSHGLG00000001018	-	64	79.894	Heterocephalus_glaber_female
ENSUAMG00000024947	-	76	77.619	ENSHGLG00000001905	-	63	79.670	Heterocephalus_glaber_female
ENSUAMG00000024947	-	76	78.605	ENSHGLG00100011252	-	64	79.894	Heterocephalus_glaber_male
ENSUAMG00000024947	-	76	77.619	ENSHGLG00100018676	-	66	79.670	Heterocephalus_glaber_male
ENSUAMG00000024947	-	67	54.945	ENSHCOG00000017136	smn1	52	58.974	Hippocampus_comes
ENSUAMG00000024947	-	67	89.011	ENSSTOG00000012288	-	66	89.130	Ictidomys_tridecemlineatus
ENSUAMG00000024947	-	64	63.793	ENSJJAG00000014853	-	89	64.000	Jaculus_jaculus
ENSUAMG00000024947	-	60	57.738	ENSKMAG00000007239	smn1	57	57.647	Kryptolebias_marmoratus
ENSUAMG00000024947	-	59	61.111	ENSLBEG00000022550	smn1	56	61.111	Labrus_bergylta
ENSUAMG00000024947	-	52	41.781	ENSLACG00000009808	-	54	39.024	Latimeria_chalumnae
ENSUAMG00000024947	-	67	53.226	ENSLOCG00000011339	smn1	61	60.377	Lepisosteus_oculatus
ENSUAMG00000024947	-	71	88.325	ENSLAFG00000003425	-	66	88.500	Loxodonta_africana
ENSUAMG00000024947	-	67	89.130	ENSMFAG00000031523	SMN1	70	89.130	Macaca_fascicularis
ENSUAMG00000024947	-	67	84.239	ENSMFAG00000008812	-	62	84.239	Macaca_fascicularis
ENSUAMG00000024947	-	67	83.152	ENSMMUG00000030594	-	62	83.152	Macaca_mulatta
ENSUAMG00000024947	-	67	89.130	ENSMMUG00000020214	SMN1	70	89.130	Macaca_mulatta
ENSUAMG00000024947	-	67	89.130	ENSMNEG00000035094	-	70	89.130	Macaca_nemestrina
ENSUAMG00000024947	-	67	88.587	ENSMLEG00000041902	-	70	88.587	Mandrillus_leucophaeus
ENSUAMG00000024947	-	66	57.459	ENSMAMG00000011034	smn1	54	62.179	Mastacembelus_armatus
ENSUAMG00000024947	-	57	64.744	ENSMZEG00005013634	smn1	54	64.744	Maylandia_zebra
ENSUAMG00000024947	-	70	82.292	ENSMAUG00000010262	Smn1	63	82.609	Mesocricetus_auratus
ENSUAMG00000024947	-	77	88.038	ENSMICG00000034708	-	82	89.130	Microcebus_murinus
ENSUAMG00000024947	-	70	81.250	ENSMOCG00000017833	Smn1	63	81.522	Microtus_ochrogaster
ENSUAMG00000024947	-	68	52.880	ENSMMOG00000005504	smn1	66	54.444	Mola_mola
ENSUAMG00000024947	-	72	68.528	ENSMODG00000001436	-	64	70.968	Monodelphis_domestica
ENSUAMG00000024947	-	66	57.459	ENSMALG00000008025	smn1	54	62.821	Monopterus_albus
ENSUAMG00000024947	-	70	82.812	MGP_CAROLIEiJ_G0018836	Smn1	62	84.066	Mus_caroli
ENSUAMG00000024947	-	70	82.292	ENSMUSG00000021645	Smn1	62	83.516	Mus_musculus
ENSUAMG00000024947	-	76	81.643	MGP_PahariEiJ_G0015911	Smn1	63	81.868	Mus_pahari
ENSUAMG00000024947	-	70	82.292	MGP_SPRETEiJ_G0019718	Smn1	62	83.516	Mus_spretus
ENSUAMG00000024947	-	76	98.558	ENSMPUG00000014470	-	74	98.558	Mustela_putorius_furo
ENSUAMG00000024947	-	79	89.401	ENSMLUG00000010603	-	59	91.304	Myotis_lucifugus
ENSUAMG00000024947	-	76	85.024	ENSNGAG00000019833	Smn1	63	85.326	Nannospalax_galili
ENSUAMG00000024947	-	57	65.385	ENSNBRG00000023000	smn1	54	65.385	Neolamprologus_brichardi
ENSUAMG00000024947	-	71	86.667	ENSNLEG00000004454	-	70	88.043	Nomascus_leucogenys
ENSUAMG00000024947	-	52	63.194	ENSMEUG00000011393	-	65	65.517	Notamacropus_eugenii
ENSUAMG00000024947	-	62	83.333	ENSOPRG00000002015	-	66	83.333	Ochotona_princeps
ENSUAMG00000024947	-	68	82.703	ENSODEG00000015976	-	64	82.609	Octodon_degus
ENSUAMG00000024947	-	58	64.557	ENSONIG00000011799	smn1	55	64.557	Oreochromis_niloticus
ENSUAMG00000024947	-	70	64.062	ENSOANG00000001626	-	64	68.715	Ornithorhynchus_anatinus
ENSUAMG00000024947	-	70	80.808	ENSOCUG00000026649	-	66	85.185	Oryctolagus_cuniculus
ENSUAMG00000024947	-	70	74.611	ENSOCUG00000025183	-	59	74.457	Oryctolagus_cuniculus
ENSUAMG00000024947	-	71	88.205	ENSOCUG00000017097	-	65	88.587	Oryctolagus_cuniculus
ENSUAMG00000024947	-	57	60.256	ENSORLG00000010552	smn1	54	60.256	Oryzias_latipes
ENSUAMG00000024947	-	57	60.256	ENSORLG00020007936	smn1	59	60.256	Oryzias_latipes_hni
ENSUAMG00000024947	-	57	59.615	ENSORLG00015022425	smn1	54	59.615	Oryzias_latipes_hsok
ENSUAMG00000024947	-	57	59.615	ENSOMEG00000007824	smn1	54	61.392	Oryzias_melastigma
ENSUAMG00000024947	-	73	75.000	ENSOGAG00000031414	-	64	73.514	Otolemur_garnettii
ENSUAMG00000024947	-	72	83.333	ENSOARG00000005425	-	64	83.616	Ovis_aries
ENSUAMG00000024947	-	67	87.500	ENSPPAG00000036640	-	70	87.500	Pan_paniscus
ENSUAMG00000024947	-	71	92.746	ENSPPRG00000005575	-	71	92.973	Panthera_pardus
ENSUAMG00000024947	-	71	92.746	ENSPTIG00000007745	-	71	92.973	Panthera_tigris_altaica
ENSUAMG00000024947	-	67	88.043	ENSPTRG00000016955	-	70	88.043	Pan_troglodytes
ENSUAMG00000024947	-	71	87.692	ENSPANG00000013601	-	70	89.130	Papio_anubis
ENSUAMG00000024947	-	67	85.326	ENSPANG00000000253	-	67	85.326	Papio_anubis
ENSUAMG00000024947	-	56	54.545	ENSPKIG00000011096	smn1	62	56.604	Paramormyrops_kingsleyae
ENSUAMG00000024947	-	66	64.021	ENSPSIG00000014787	-	61	63.784	Pelodiscus_sinensis
ENSUAMG00000024947	-	57	54.938	ENSPMGG00000012285	smn1	58	58.750	Periophthalmus_magnuspinnatus
ENSUAMG00000024947	-	77	39.151	ENSPMAG00000005004	smn1	55	41.718	Petromyzon_marinus
ENSUAMG00000024947	-	68	69.681	ENSPCIG00000025764	-	65	70.968	Phascolarctos_cinereus
ENSUAMG00000024947	-	63	56.571	ENSPFOG00000007786	smn1	58	59.509	Poecilia_formosa
ENSUAMG00000024947	-	63	57.143	ENSPLAG00000012071	smn1	59	61.538	Poecilia_latipinna
ENSUAMG00000024947	-	63	56.571	ENSPMEG00000017085	smn1	59	60.897	Poecilia_mexicana
ENSUAMG00000024947	-	63	58.286	ENSPREG00000005824	smn1	59	62.179	Poecilia_reticulata
ENSUAMG00000024947	-	62	85.294	ENSPPYG00000015533	-	61	85.294	Pongo_abelii
ENSUAMG00000024947	-	53	71.918	ENSPPYG00000019189	-	74	71.918	Pongo_abelii
ENSUAMG00000024947	-	67	85.106	ENSPCAG00000004187	-	64	86.628	Procavia_capensis
ENSUAMG00000024947	-	64	89.655	ENSPCOG00000022307	-	74	89.571	Propithecus_coquereli
ENSUAMG00000024947	-	67	93.989	ENSPVAG00000005977	-	63	94.022	Pteropus_vampyrus
ENSUAMG00000024947	-	57	65.385	ENSPNYG00000014148	smn1	54	65.385	Pundamilia_nyererei
ENSUAMG00000024947	-	70	80.208	ENSRNOG00000018067	Smn1	62	81.319	Rattus_norvegicus
ENSUAMG00000024947	-	67	88.587	ENSRBIG00000037052	-	70	88.587	Rhinopithecus_bieti
ENSUAMG00000024947	-	77	80.095	ENSRBIG00000036775	-	67	84.783	Rhinopithecus_bieti
ENSUAMG00000024947	-	77	76.777	ENSRROG00000031088	-	68	80.978	Rhinopithecus_roxellana
ENSUAMG00000024947	-	67	88.587	ENSRROG00000039399	-	70	88.587	Rhinopithecus_roxellana
ENSUAMG00000024947	-	67	86.957	ENSSBOG00000011665	-	70	86.957	Saimiri_boliviensis_boliviensis
ENSUAMG00000024947	-	62	82.840	ENSSBOG00000020112	-	59	82.840	Saimiri_boliviensis_boliviensis
ENSUAMG00000024947	-	71	69.231	ENSSHAG00000001499	-	63	70.968	Sarcophilus_harrisii
ENSUAMG00000024947	-	58	57.233	ENSSFOG00015015507	smn1	60	57.233	Scleropages_formosus
ENSUAMG00000024947	-	66	57.459	ENSSDUG00000018533	smn1	54	62.821	Seriola_dumerili
ENSUAMG00000024947	-	66	57.459	ENSSLDG00000021135	smn1	54	62.821	Seriola_lalandi_dorsalis
ENSUAMG00000024947	-	70	66.154	ENSSPUG00000000373	-	63	69.274	Sphenodon_punctatus
ENSUAMG00000024947	-	57	62.179	ENSSPAG00000004345	smn1	58	62.179	Stegastes_partitus
ENSUAMG00000024947	-	67	92.391	ENSSSCG00000016970	-	63	92.391	Sus_scrofa
ENSUAMG00000024947	-	67	71.196	ENSSSCG00000029127	-	67	67.391	Sus_scrofa
ENSUAMG00000024947	-	73	61.386	ENSTGUG00000001548	-	63	64.773	Taeniopygia_guttata
ENSUAMG00000024947	-	60	57.576	ENSTRUG00000000736	smn	63	53.714	Takifugu_rubripes
ENSUAMG00000024947	-	70	88.542	ENSTBEG00000002399	-	89	88.043	Tupaia_belangeri
ENSUAMG00000024947	-	67	90.710	ENSTTRG00000005080	-	63	90.761	Tursiops_truncatus
ENSUAMG00000024947	-	99	98.519	ENSUMAG00000007842	-	70	98.519	Ursus_maritimus
ENSUAMG00000024947	-	57	93.590	ENSVPAG00000009887	-	56	93.590	Vicugna_pacos
ENSUAMG00000024947	-	77	92.488	ENSVVUG00000006934	-	64	93.478	Vulpes_vulpes
ENSUAMG00000024947	-	53	40.000	ENSXETG00000004912	-	80	55.556	Xenopus_tropicalis
ENSUAMG00000024947	-	71	54.545	ENSXETG00000018189	smn2	63	57.609	Xenopus_tropicalis
ENSUAMG00000024947	-	58	61.392	ENSXMAG00000001521	smn1	60	60.759	Xiphophorus_maculatus