EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSUAMG00000025160 (Gene tree)
Gene ID: -
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 14098 bases
Position: chrLZNR01000716.1:284475-298572
Accession: 25542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000033024	AARP2CN	PF08142.12	5.6e-21	1	1
ENSUAMP00000032998	AARP2CN	PF08142.12	6.7e-21	1	1
ENSUAMP00000033007	AARP2CN	PF08142.12	6.9e-21	1	1
ENSUAMP00000033003	AARP2CN	PF08142.12	7.1e-21	1	1
ENSUAMP00000032999	AARP2CN	PF08142.12	7.2e-21	1	1
ENSUAMP00000033000	AARP2CN	PF08142.12	7.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000036798	TSR1-206	2756	-	ENSUAMP00000033024	679 (aa)	-	-
ENSUAMT00000036772	TSR1-202	2448	-	ENSUAMP00000032999	815 (aa)	-	-
ENSUAMT00000036773	TSR1-203	2445	-	ENSUAMP00000033000	814 (aa)	-	-
ENSUAMT00000036771	TSR1-201	2391	-	ENSUAMP00000032998	796 (aa)	-	-
ENSUAMT00000036776	TSR1-204	2403	-	ENSUAMP00000033003	800 (aa)	-	-
ENSUAMT00000036780	TSR1-205	2376	-	ENSUAMP00000033007	791 (aa)	-	-

Gene Model

Click here to download ENSUAMG00000025160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000025160's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000025160	TSR1	99	87.722	ENSG00000167721	TSR1	100	87.469	Homo_sapiens
ENSUAMG00000025160	TSR1	99	54.611	ENSAPOG00000020891	tsr1	99	55.396	Acanthochromis_polyacanthus
ENSUAMG00000025160	TSR1	99	96.779	ENSAMEG00000007599	TSR1	100	96.215	Ailuropoda_melanoleuca
ENSUAMG00000025160	TSR1	99	55.734	ENSACIG00000007090	tsr1	99	55.814	Amphilophus_citrinellus
ENSUAMG00000025160	TSR1	99	54.272	ENSAOCG00000023284	tsr1	99	54.862	Amphiprion_ocellaris
ENSUAMG00000025160	TSR1	93	55.013	ENSAPEG00000008452	tsr1	100	55.641	Amphiprion_percula
ENSUAMG00000025160	TSR1	99	53.901	ENSATEG00000021961	tsr1	99	55.238	Anabas_testudineus
ENSUAMG00000025160	TSR1	90	67.755	ENSAPLG00000013422	TSR1	98	68.399	Anas_platyrhynchos
ENSUAMG00000025160	TSR1	83	57.414	ENSACAG00000000859	TSR1	92	57.659	Anolis_carolinensis
ENSUAMG00000025160	TSR1	99	89.021	ENSANAG00000031071	TSR1	100	88.433	Aotus_nancymaae
ENSUAMG00000025160	TSR1	99	54.808	ENSACLG00000007595	tsr1	99	55.060	Astatotilapia_calliptera
ENSUAMG00000025160	TSR1	59	48.792	ENSAMXG00000008470	tsr1	96	46.916	Astyanax_mexicanus
ENSUAMG00000025160	TSR1	99	90.356	ENSBTAG00000004225	TSR1	100	89.677	Bos_taurus
ENSUAMG00000025160	TSR1	97	38.981	WBGene00006497	tag-151	96	39.565	Caenorhabditis_elegans
ENSUAMG00000025160	TSR1	99	88.872	ENSCJAG00000012456	TSR1	100	87.935	Callithrix_jacchus
ENSUAMG00000025160	TSR1	99	93.917	ENSCAFG00000002106	-	100	93.159	Canis_familiaris
ENSUAMG00000025160	TSR1	99	93.620	ENSCAFG00000019273	-	100	94.512	Canis_familiaris
ENSUAMG00000025160	TSR1	99	92.878	ENSCAFG00020009728	TSR1	100	92.289	Canis_lupus_dingo
ENSUAMG00000025160	TSR1	99	90.356	ENSCHIG00000023935	TSR1	100	90.050	Capra_hircus
ENSUAMG00000025160	TSR1	99	89.169	ENSTSYG00000005468	TSR1	100	88.308	Carlito_syrichta
ENSUAMG00000025160	TSR1	99	85.015	ENSCPOG00000014833	TSR1	99	86.059	Cavia_porcellus
ENSUAMG00000025160	TSR1	99	89.911	ENSCCAG00000028962	TSR1	98	89.276	Cebus_capucinus
ENSUAMG00000025160	TSR1	99	88.462	ENSCATG00000044262	TSR1	100	87.593	Cercocebus_atys
ENSUAMG00000025160	TSR1	99	86.823	ENSCLAG00000005567	TSR1	100	86.946	Chinchilla_lanigera
ENSUAMG00000025160	TSR1	99	88.166	ENSCSAG00000013788	TSR1	100	87.593	Chlorocebus_sabaeus
ENSUAMG00000025160	TSR1	99	67.857	ENSCPBG00000020363	TSR1	97	68.054	Chrysemys_picta_bellii
ENSUAMG00000025160	TSR1	97	46.154	ENSCING00000020658	-	99	46.212	Ciona_intestinalis
ENSUAMG00000025160	TSR1	97	45.466	ENSCSAVG00000001875	-	100	44.656	Ciona_savignyi
ENSUAMG00000025160	TSR1	99	80.669	ENSCANG00000033056	TSR1	99	75.508	Colobus_angolensis_palliatus
ENSUAMG00000025160	TSR1	100	84.069	ENSCGRG00001023942	Tsr1	100	85.342	Cricetulus_griseus_chok1gshd
ENSUAMG00000025160	TSR1	100	78.378	ENSCGRG00000013015	Tsr1	100	80.448	Cricetulus_griseus_crigri
ENSUAMG00000025160	TSR1	99	54.380	ENSCSEG00000013009	tsr1	99	54.897	Cynoglossus_semilaevis
ENSUAMG00000025160	TSR1	99	54.557	ENSCVAG00000000506	tsr1	99	55.394	Cyprinodon_variegatus
ENSUAMG00000025160	TSR1	99	53.670	ENSDARG00000007744	tsr1	99	54.345	Danio_rerio
ENSUAMG00000025160	TSR1	99	88.724	ENSDNOG00000004715	TSR1	100	89.883	Dasypus_novemcinctus
ENSUAMG00000025160	TSR1	99	85.438	ENSDORG00000016371	-	100	85.327	Dipodomys_ordii
ENSUAMG00000025160	TSR1	99	73.700	ENSDORG00000023234	-	100	74.319	Dipodomys_ordii
ENSUAMG00000025160	TSR1	97	43.429	FBgn0037073	Tsr1	96	44.836	Drosophila_melanogaster
ENSUAMG00000025160	TSR1	92	89.836	ENSETEG00000017534	TSR1	92	89.836	Echinops_telfairi
ENSUAMG00000025160	TSR1	95	53.636	ENSEBUG00000013731	TSR1	98	53.117	Eptatretus_burgeri
ENSUAMG00000025160	TSR1	99	91.691	ENSEASG00005009302	TSR1	98	90.470	Equus_asinus_asinus
ENSUAMG00000025160	TSR1	99	91.691	ENSECAG00000009114	TSR1	100	91.022	Equus_caballus
ENSUAMG00000025160	TSR1	99	53.874	ENSELUG00000020984	tsr1	96	54.916	Esox_lucius
ENSUAMG00000025160	TSR1	99	92.571	ENSFCAG00000006313	TSR1	100	92.145	Felis_catus
ENSUAMG00000025160	TSR1	99	68.137	ENSFALG00000006532	TSR1	99	68.473	Ficedula_albicollis
ENSUAMG00000025160	TSR1	99	86.816	ENSFDAG00000006038	TSR1	100	87.065	Fukomys_damarensis
ENSUAMG00000025160	TSR1	99	54.142	ENSFHEG00000003626	tsr1	99	54.132	Fundulus_heteroclitus
ENSUAMG00000025160	TSR1	99	52.088	ENSGMOG00000010336	tsr1	99	52.457	Gadus_morhua
ENSUAMG00000025160	TSR1	99	53.735	ENSGAFG00000012993	tsr1	99	54.172	Gambusia_affinis
ENSUAMG00000025160	TSR1	99	53.006	ENSGACG00000010843	tsr1	99	52.638	Gasterosteus_aculeatus
ENSUAMG00000025160	TSR1	53	46.537	ENSGAGG00000000440	-	98	47.414	Gopherus_agassizii
ENSUAMG00000025160	TSR1	99	67.450	ENSGAGG00000025619	-	99	68.734	Gopherus_agassizii
ENSUAMG00000025160	TSR1	99	87.592	ENSGGOG00000001704	TSR1	100	87.841	Gorilla_gorilla
ENSUAMG00000025160	TSR1	99	54.731	ENSHBUG00000017904	tsr1	100	55.499	Haplochromis_burtoni
ENSUAMG00000025160	TSR1	99	87.537	ENSHGLG00000012806	-	100	86.940	Heterocephalus_glaber_female
ENSUAMG00000025160	TSR1	96	76.735	ENSHGLG00000015688	-	99	76.893	Heterocephalus_glaber_female
ENSUAMG00000025160	TSR1	99	87.537	ENSHGLG00100015392	TSR1	100	86.940	Heterocephalus_glaber_male
ENSUAMG00000025160	TSR1	99	55.172	ENSHCOG00000001432	tsr1	99	55.556	Hippocampus_comes
ENSUAMG00000025160	TSR1	99	54.262	ENSIPUG00000004618	tsr1	99	55.114	Ictalurus_punctatus
ENSUAMG00000025160	TSR1	99	87.469	ENSSTOG00000011819	TSR1	100	87.469	Ictidomys_tridecemlineatus
ENSUAMG00000025160	TSR1	91	79.783	ENSJJAG00000019505	Tsr1	95	80.488	Jaculus_jaculus
ENSUAMG00000025160	TSR1	99	53.614	ENSKMAG00000005763	tsr1	99	53.494	Kryptolebias_marmoratus
ENSUAMG00000025160	TSR1	99	53.726	ENSLBEG00000021823	tsr1	99	54.458	Labrus_bergylta
ENSUAMG00000025160	TSR1	99	62.393	ENSLACG00000002197	TSR1	99	62.776	Latimeria_chalumnae
ENSUAMG00000025160	TSR1	82	58.471	ENSLOCG00000006491	TSR1	88	59.070	Lepisosteus_oculatus
ENSUAMG00000025160	TSR1	99	88.462	ENSMFAG00000021330	TSR1	100	87.841	Macaca_fascicularis
ENSUAMG00000025160	TSR1	99	88.018	ENSMMUG00000017519	TSR1	100	87.469	Macaca_mulatta
ENSUAMG00000025160	TSR1	99	88.018	ENSMNEG00000031382	TSR1	100	87.469	Macaca_nemestrina
ENSUAMG00000025160	TSR1	99	88.314	ENSMLEG00000036733	TSR1	100	87.469	Mandrillus_leucophaeus
ENSUAMG00000025160	TSR1	99	54.415	ENSMAMG00000017918	tsr1	99	54.436	Mastacembelus_armatus
ENSUAMG00000025160	TSR1	99	54.676	ENSMZEG00005007477	tsr1	99	54.819	Maylandia_zebra
ENSUAMG00000025160	TSR1	99	67.078	ENSMGAG00000005576	TSR1	99	67.901	Meleagris_gallopavo
ENSUAMG00000025160	TSR1	99	90.356	ENSMICG00000012943	TSR1	100	89.677	Microcebus_murinus
ENSUAMG00000025160	TSR1	100	83.578	ENSMOCG00000022764	Tsr1	100	84.348	Microtus_ochrogaster
ENSUAMG00000025160	TSR1	99	54.490	ENSMMOG00000014280	tsr1	99	54.811	Mola_mola
ENSUAMG00000025160	TSR1	100	76.894	ENSMODG00000010658	TSR1	100	77.640	Monodelphis_domestica
ENSUAMG00000025160	TSR1	99	54.458	ENSMALG00000011681	tsr1	99	55.542	Monopterus_albus
ENSUAMG00000025160	TSR1	100	85.276	MGP_CAROLIEiJ_G0016727	Tsr1	100	85.276	Mus_caroli
ENSUAMG00000025160	TSR1	100	85.767	ENSMUSG00000038335	Tsr1	100	85.767	Mus_musculus
ENSUAMG00000025160	TSR1	100	85.890	MGP_PahariEiJ_G0017864	Tsr1	100	85.890	Mus_pahari
ENSUAMG00000025160	TSR1	100	85.890	MGP_SPRETEiJ_G0017570	Tsr1	100	85.890	Mus_spretus
ENSUAMG00000025160	TSR1	80	94.504	ENSMPUG00000013000	TSR1	100	94.504	Mustela_putorius_furo
ENSUAMG00000025160	TSR1	99	92.582	ENSMLUG00000003505	TSR1	100	91.418	Myotis_lucifugus
ENSUAMG00000025160	TSR1	57	77.261	ENSNGAG00000020455	-	98	78.010	Nannospalax_galili
ENSUAMG00000025160	TSR1	99	54.545	ENSNBRG00000020728	tsr1	99	54.600	Neolamprologus_brichardi
ENSUAMG00000025160	TSR1	99	80.324	ENSNLEG00000017184	TSR1	100	81.445	Nomascus_leucogenys
ENSUAMG00000025160	TSR1	99	73.156	ENSMEUG00000015828	TSR1	99	72.966	Notamacropus_eugenii
ENSUAMG00000025160	TSR1	99	54.600	ENSONIG00000013131	tsr1	99	55.206	Oreochromis_niloticus
ENSUAMG00000025160	TSR1	96	72.072	ENSOANG00000008637	TSR1	100	72.587	Ornithorhynchus_anatinus
ENSUAMG00000025160	TSR1	99	88.724	ENSOCUG00000014256	TSR1	99	88.155	Oryctolagus_cuniculus
ENSUAMG00000025160	TSR1	99	53.559	ENSORLG00000004926	tsr1	99	54.348	Oryzias_latipes
ENSUAMG00000025160	TSR1	99	53.623	ENSORLG00020008792	tsr1	99	54.237	Oryzias_latipes_hni
ENSUAMG00000025160	TSR1	99	53.438	ENSORLG00015013838	tsr1	99	54.227	Oryzias_latipes_hsok
ENSUAMG00000025160	TSR1	99	54.096	ENSOMEG00000004830	tsr1	99	54.885	Oryzias_melastigma
ENSUAMG00000025160	TSR1	99	86.806	ENSOGAG00000004492	TSR1	100	87.053	Otolemur_garnettii
ENSUAMG00000025160	TSR1	99	90.356	ENSOARG00000015437	TSR1	98	89.364	Ovis_aries
ENSUAMG00000025160	TSR1	99	87.870	ENSPPAG00000036355	TSR1	100	87.593	Pan_paniscus
ENSUAMG00000025160	TSR1	99	92.125	ENSPPRG00000015519	-	100	91.895	Panthera_pardus
ENSUAMG00000025160	TSR1	99	92.422	ENSPTIG00000010608	TSR1	100	92.145	Panthera_tigris_altaica
ENSUAMG00000025160	TSR1	99	87.870	ENSPTRG00000008547	TSR1	100	87.593	Pan_troglodytes
ENSUAMG00000025160	TSR1	99	84.615	ENSPANG00000024463	TSR1	100	84.615	Papio_anubis
ENSUAMG00000025160	TSR1	99	54.126	ENSPKIG00000013972	tsr1	99	54.126	Paramormyrops_kingsleyae
ENSUAMG00000025160	TSR1	87	67.468	ENSPSIG00000018258	TSR1	100	68.547	Pelodiscus_sinensis
ENSUAMG00000025160	TSR1	99	56.931	ENSPMGG00000011577	tsr1	99	56.931	Periophthalmus_magnuspinnatus
ENSUAMG00000025160	TSR1	100	83.681	ENSPEMG00000018033	Tsr1	100	83.955	Peromyscus_maniculatus_bairdii
ENSUAMG00000025160	TSR1	100	76.799	ENSPCIG00000009357	TSR1	98	78.519	Phascolarctos_cinereus
ENSUAMG00000025160	TSR1	99	53.893	ENSPFOG00000004483	TSR1	99	55.043	Poecilia_formosa
ENSUAMG00000025160	TSR1	99	54.074	ENSPLAG00000022320	tsr1	99	54.676	Poecilia_latipinna
ENSUAMG00000025160	TSR1	99	53.618	ENSPMEG00000004577	tsr1	99	54.796	Poecilia_mexicana
ENSUAMG00000025160	TSR1	97	52.696	ENSPREG00000010354	tsr1	95	54.512	Poecilia_reticulata
ENSUAMG00000025160	TSR1	99	79.340	ENSPPYG00000007792	TSR1	100	79.336	Pongo_abelii
ENSUAMG00000025160	TSR1	62	90.526	ENSPCAG00000012973	-	72	90.526	Procavia_capensis
ENSUAMG00000025160	TSR1	99	89.896	ENSPCOG00000017928	TSR1	100	89.415	Propithecus_coquereli
ENSUAMG00000025160	TSR1	99	90.356	ENSPVAG00000002162	TSR1	100	89.677	Pteropus_vampyrus
ENSUAMG00000025160	TSR1	99	54.928	ENSPNYG00000016163	tsr1	99	55.181	Pundamilia_nyererei
ENSUAMG00000025160	TSR1	99	54.067	ENSPNAG00000008659	tsr1	99	54.251	Pygocentrus_nattereri
ENSUAMG00000025160	TSR1	100	83.946	ENSRNOG00000002980	Tsr1	100	84.472	Rattus_norvegicus
ENSUAMG00000025160	TSR1	99	88.314	ENSRBIG00000040016	TSR1	100	87.593	Rhinopithecus_bieti
ENSUAMG00000025160	TSR1	99	88.166	ENSRROG00000030361	TSR1	100	87.469	Rhinopithecus_roxellana
ENSUAMG00000025160	TSR1	99	89.021	ENSSBOG00000020785	TSR1	100	88.433	Saimiri_boliviensis_boliviensis
ENSUAMG00000025160	TSR1	99	76.609	ENSSHAG00000011394	TSR1	100	76.980	Sarcophilus_harrisii
ENSUAMG00000025160	TSR1	99	55.732	ENSSFOG00015005455	tsr1	99	55.907	Scleropages_formosus
ENSUAMG00000025160	TSR1	99	53.524	ENSSMAG00000009504	tsr1	99	55.260	Scophthalmus_maximus
ENSUAMG00000025160	TSR1	99	54.819	ENSSDUG00000012074	tsr1	99	55.276	Seriola_dumerili
ENSUAMG00000025160	TSR1	99	54.952	ENSSLDG00000002031	tsr1	99	55.114	Seriola_lalandi_dorsalis
ENSUAMG00000025160	TSR1	99	75.000	ENSSARG00000000759	TSR1	100	75.000	Sorex_araneus
ENSUAMG00000025160	TSR1	99	66.462	ENSSPUG00000007042	TSR1	99	66.830	Sphenodon_punctatus
ENSUAMG00000025160	TSR1	99	54.207	ENSSPAG00000021951	tsr1	99	54.665	Stegastes_partitus
ENSUAMG00000025160	TSR1	99	91.840	ENSSSCG00000038534	TSR1	100	90.672	Sus_scrofa
ENSUAMG00000025160	TSR1	90	68.980	ENSTGUG00000005883	TSR1	100	69.168	Taeniopygia_guttata
ENSUAMG00000025160	TSR1	99	55.366	ENSTRUG00000004665	tsr1	99	55.704	Takifugu_rubripes
ENSUAMG00000025160	TSR1	99	55.130	ENSTNIG00000016196	tsr1	99	55.006	Tetraodon_nigroviridis
ENSUAMG00000025160	TSR1	68	93.846	ENSTBEG00000015275	-	67	93.846	Tupaia_belangeri
ENSUAMG00000025160	TSR1	99	90.504	ENSTTRG00000001177	TSR1	100	89.925	Tursiops_truncatus
ENSUAMG00000025160	TSR1	96	98.310	ENSUMAG00000009294	TSR1	99	96.958	Ursus_maritimus
ENSUAMG00000025160	TSR1	99	88.559	ENSVPAG00000000228	TSR1	100	88.559	Vicugna_pacos
ENSUAMG00000025160	TSR1	99	93.472	ENSVVUG00000021767	TSR1	100	92.537	Vulpes_vulpes
ENSUAMG00000025160	TSR1	99	59.608	ENSXETG00000023797	tsr1	99	61.067	Xenopus_tropicalis
ENSUAMG00000025160	TSR1	99	54.300	ENSXCOG00000009635	tsr1	99	54.668	Xiphophorus_couchianus
ENSUAMG00000025160	TSR1	99	53.911	ENSXMAG00000001397	tsr1	97	53.993	Xiphophorus_maculatus