EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSUAMG00000025405 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ursus_americanus
Status: putative
Strand: Minus strand
Length: 32284 bases
Position: chrLZNR01000721.1:139051-171334
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSUAMP00000033330	MRP-S32	PF10210.9	5e-42	1	1
ENSUAMP00000033327	MRP-S32	PF10210.9	6.4e-42	1	1
ENSUAMP00000033328	MRP-S32	PF10210.9	6.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSUAMT00000037135	-	1019	-	ENSUAMP00000033330	134 (aa)	-	-
ENSUAMT00000037133	-	851	-	ENSUAMP00000033328	142 (aa)	-	UPI0004E018A0
ENSUAMT00000037132	-	784	-	ENSUAMP00000033327	142 (aa)	-	UPI0004E018A0

Gene Model

Click here to download ENSUAMG00000025405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSUAMG00000025405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSUAMG00000025405	-	57	81.481	ENSUAMG00000019831	-	85	81.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSUAMG00000025405	-	100	88.028	ENSG00000198015	MRPL42	100	89.844	Homo_sapiens
ENSUAMG00000025405	-	82	97.273	ENSAMEG00000009832	MRPL42	87	97.273	Ailuropoda_melanoleuca
ENSUAMG00000025405	-	72	67.708	ENSACIG00000017826	mrpl42	69	67.708	Amphilophus_citrinellus
ENSUAMG00000025405	-	90	73.554	ENSAPLG00000015057	MRPL42	97	64.748	Anas_platyrhynchos
ENSUAMG00000025405	-	90	82.812	ENSANAG00000000692	-	91	82.812	Aotus_nancymaae
ENSUAMG00000025405	-	100	82.394	ENSANAG00000036935	-	100	82.394	Aotus_nancymaae
ENSUAMG00000025405	-	89	80.315	ENSANAG00000033101	-	84	80.315	Aotus_nancymaae
ENSUAMG00000025405	-	71	85.149	ENSANAG00000036083	-	85	85.149	Aotus_nancymaae
ENSUAMG00000025405	-	79	77.358	ENSBTAG00000052971	-	97	77.358	Bos_taurus
ENSUAMG00000025405	-	100	92.254	ENSBTAG00000002708	MRPL42	100	92.254	Bos_taurus
ENSUAMG00000025405	-	100	86.620	ENSCJAG00000046971	MRPL42	100	86.620	Callithrix_jacchus
ENSUAMG00000025405	-	54	80.952	ENSCAFG00000030257	-	93	80.952	Canis_familiaris
ENSUAMG00000025405	-	51	93.151	ENSCAFG00020016271	-	97	93.151	Canis_lupus_dingo
ENSUAMG00000025405	-	72	98.969	ENSCAFG00020022967	-	85	98.969	Canis_lupus_dingo
ENSUAMG00000025405	-	90	93.750	ENSCHIG00000014921	MRPL42	100	93.750	Capra_hircus
ENSUAMG00000025405	-	81	82.569	ENSTSYG00000032810	-	100	82.569	Carlito_syrichta
ENSUAMG00000025405	-	100	88.732	ENSTSYG00000006370	-	100	88.732	Carlito_syrichta
ENSUAMG00000025405	-	92	83.206	ENSTSYG00000036466	-	90	83.206	Carlito_syrichta
ENSUAMG00000025405	-	89	88.235	ENSCAPG00000016985	-	100	80.882	Cavia_aperea
ENSUAMG00000025405	-	100	71.127	ENSCAPG00000015105	-	100	71.127	Cavia_aperea
ENSUAMG00000025405	-	96	87.500	ENSCPOG00000030015	-	98	86.525	Cavia_porcellus
ENSUAMG00000025405	-	100	71.831	ENSCPOG00000008943	-	100	71.831	Cavia_porcellus
ENSUAMG00000025405	-	89	84.252	ENSCCAG00000032203	-	77	84.252	Cebus_capucinus
ENSUAMG00000025405	-	100	86.620	ENSCCAG00000031179	-	100	86.620	Cebus_capucinus
ENSUAMG00000025405	-	90	68.750	ENSCCAG00000029290	-	83	68.750	Cebus_capucinus
ENSUAMG00000025405	-	100	88.732	ENSCATG00000037616	MRPL42	100	88.732	Cercocebus_atys
ENSUAMG00000025405	-	100	87.324	ENSCLAG00000005421	MRPL42	100	87.324	Chinchilla_lanigera
ENSUAMG00000025405	-	100	88.028	ENSCSAG00000003706	MRPL42	100	88.028	Chlorocebus_sabaeus
ENSUAMG00000025405	-	88	50.000	ENSCHOG00000007010	-	100	50.000	Choloepus_hoffmanni
ENSUAMG00000025405	-	100	67.568	ENSCPBG00000001581	MRPL42	100	67.568	Chrysemys_picta_bellii
ENSUAMG00000025405	-	100	89.437	ENSCANG00000033457	MRPL42	100	89.437	Colobus_angolensis_palliatus
ENSUAMG00000025405	-	100	79.577	ENSCGRG00001012694	-	99	79.577	Cricetulus_griseus_chok1gshd
ENSUAMG00000025405	-	98	67.626	ENSCGRG00001003813	-	98	67.626	Cricetulus_griseus_chok1gshd
ENSUAMG00000025405	-	98	81.295	ENSCGRG00000003801	Mrpl42	99	81.295	Cricetulus_griseus_crigri
ENSUAMG00000025405	-	100	83.099	ENSDNOG00000032710	-	100	83.099	Dasypus_novemcinctus
ENSUAMG00000025405	-	100	79.577	ENSDNOG00000049701	-	100	79.577	Dasypus_novemcinctus
ENSUAMG00000025405	-	98	87.050	ENSDORG00000015571	Mrpl42	99	87.050	Dipodomys_ordii
ENSUAMG00000025405	-	91	59.350	ENSETEG00000014745	-	99	57.143	Echinops_telfairi
ENSUAMG00000025405	-	100	95.775	ENSEASG00005019361	MRPL42	100	95.775	Equus_asinus_asinus
ENSUAMG00000025405	-	100	94.366	ENSECAG00000026888	MRPL42	100	94.366	Equus_caballus
ENSUAMG00000025405	-	100	94.366	ENSFCAG00000037907	-	100	94.366	Felis_catus
ENSUAMG00000025405	-	93	87.903	ENSFCAG00000040567	-	100	91.935	Felis_catus
ENSUAMG00000025405	-	89	75.591	ENSFCAG00000036356	-	79	75.591	Felis_catus
ENSUAMG00000025405	-	90	72.727	ENSFALG00000010717	MRPL42	99	67.586	Ficedula_albicollis
ENSUAMG00000025405	-	98	84.173	ENSFDAG00000018129	MRPL42	99	84.173	Fukomys_damarensis
ENSUAMG00000025405	-	88	72.034	ENSGALG00000011293	MRPL42	99	62.069	Gallus_gallus
ENSUAMG00000025405	-	100	68.243	ENSGAGG00000010125	MRPL42	100	68.243	Gopherus_agassizii
ENSUAMG00000025405	-	100	88.028	ENSGGOG00000022760	MRPL42	100	88.028	Gorilla_gorilla
ENSUAMG00000025405	-	87	86.179	ENSHGLG00000008248	-	100	86.179	Heterocephalus_glaber_female
ENSUAMG00000025405	-	86	89.344	ENSHGLG00000007399	-	93	88.889	Heterocephalus_glaber_female
ENSUAMG00000025405	-	85	85.950	ENSHGLG00100013257	-	98	85.950	Heterocephalus_glaber_male
ENSUAMG00000025405	-	87	89.516	ENSHGLG00100018317	-	87	89.516	Heterocephalus_glaber_male
ENSUAMG00000025405	-	100	82.394	ENSSTOG00000026544	MRPL42	100	82.394	Ictidomys_tridecemlineatus
ENSUAMG00000025405	-	100	64.493	ENSLACG00000006919	MRPL42	96	64.493	Latimeria_chalumnae
ENSUAMG00000025405	-	93	88.710	ENSLAFG00000013779	MRPL42	89	88.710	Loxodonta_africana
ENSUAMG00000025405	-	100	88.732	ENSMFAG00000032330	MRPL42	100	88.732	Macaca_fascicularis
ENSUAMG00000025405	-	100	86.620	ENSMMUG00000016805	MRPL42	100	86.620	Macaca_mulatta
ENSUAMG00000025405	-	100	88.732	ENSMNEG00000028853	MRPL42	100	88.732	Macaca_nemestrina
ENSUAMG00000025405	-	100	89.437	ENSMLEG00000038104	MRPL42	100	89.437	Mandrillus_leucophaeus
ENSUAMG00000025405	-	88	72.034	ENSMGAG00000011346	MRPL42	99	62.069	Meleagris_gallopavo
ENSUAMG00000025405	-	98	64.748	ENSMAUG00000018130	-	98	64.748	Mesocricetus_auratus
ENSUAMG00000025405	-	98	75.540	ENSMAUG00000010057	-	99	75.540	Mesocricetus_auratus
ENSUAMG00000025405	-	71	86.316	ENSMICG00000045594	-	96	86.316	Microcebus_murinus
ENSUAMG00000025405	-	100	88.732	ENSMICG00000032596	-	100	88.732	Microcebus_murinus
ENSUAMG00000025405	-	88	88.800	ENSMICG00000036541	-	99	84.906	Microcebus_murinus
ENSUAMG00000025405	-	72	85.417	ENSMICG00000028094	-	88	88.095	Microcebus_murinus
ENSUAMG00000025405	-	93	87.879	ENSMICG00000035189	-	92	87.879	Microcebus_murinus
ENSUAMG00000025405	-	98	77.698	ENSMOCG00000004616	-	99	77.698	Microtus_ochrogaster
ENSUAMG00000025405	-	98	81.295	ENSMOCG00000013541	-	99	81.295	Microtus_ochrogaster
ENSUAMG00000025405	-	98	80.714	MGP_CAROLIEiJ_G0015750	Mrpl42	99	80.714	Mus_caroli
ENSUAMG00000025405	-	98	80.000	ENSMUSG00000062981	Mrpl42	91	88.571	Mus_musculus
ENSUAMG00000025405	-	100	83.803	ENSMLUG00000023702	-	100	83.803	Myotis_lucifugus
ENSUAMG00000025405	-	99	87.143	ENSMLUG00000025058	-	99	87.143	Myotis_lucifugus
ENSUAMG00000025405	-	100	85.915	ENSMLUG00000029623	-	100	85.915	Myotis_lucifugus
ENSUAMG00000025405	-	90	87.500	ENSNGAG00000000717	Mrpl42	100	87.500	Nannospalax_galili
ENSUAMG00000025405	-	100	88.028	ENSNLEG00000005699	MRPL42	100	88.028	Nomascus_leucogenys
ENSUAMG00000025405	-	88	44.068	ENSMEUG00000008043	-	100	44.068	Notamacropus_eugenii
ENSUAMG00000025405	-	100	80.986	ENSOPRG00000010967	MRPL42	100	80.986	Ochotona_princeps
ENSUAMG00000025405	-	100	78.322	ENSODEG00000012689	-	100	79.720	Octodon_degus
ENSUAMG00000025405	-	99	73.944	ENSODEG00000016452	-	99	75.352	Octodon_degus
ENSUAMG00000025405	-	88	88.235	ENSODEG00000008681	-	100	88.235	Octodon_degus
ENSUAMG00000025405	-	100	84.507	ENSOCUG00000010928	MRPL42	100	84.507	Oryctolagus_cuniculus
ENSUAMG00000025405	-	100	80.986	ENSOGAG00000034004	-	100	80.986	Otolemur_garnettii
ENSUAMG00000025405	-	100	78.873	ENSOGAG00000024156	-	100	78.873	Otolemur_garnettii
ENSUAMG00000025405	-	100	88.028	ENSOGAG00000025600	-	100	88.028	Otolemur_garnettii
ENSUAMG00000025405	-	100	86.620	ENSOGAG00000025686	-	100	86.620	Otolemur_garnettii
ENSUAMG00000025405	-	98	79.856	ENSOGAG00000030438	-	99	79.856	Otolemur_garnettii
ENSUAMG00000025405	-	100	79.577	ENSOGAG00000026395	-	100	79.577	Otolemur_garnettii
ENSUAMG00000025405	-	100	80.282	ENSOGAG00000027617	-	100	80.282	Otolemur_garnettii
ENSUAMG00000025405	-	90	94.531	ENSOARG00000015849	MRPL42	100	94.531	Ovis_aries
ENSUAMG00000025405	-	100	86.620	ENSPPAG00000038254	MRPL42	100	86.620	Pan_paniscus
ENSUAMG00000025405	-	89	73.228	ENSPPRG00000006533	-	79	73.228	Panthera_pardus
ENSUAMG00000025405	-	100	93.662	ENSPPRG00000013218	-	100	93.662	Panthera_pardus
ENSUAMG00000025405	-	100	92.958	ENSPPRG00000015755	-	100	92.958	Panthera_pardus
ENSUAMG00000025405	-	93	87.903	ENSPPRG00000017935	-	100	91.935	Panthera_pardus
ENSUAMG00000025405	-	94	84.921	ENSPTIG00000009717	-	95	89.744	Panthera_tigris_altaica
ENSUAMG00000025405	-	100	92.958	ENSPTIG00000009394	-	100	92.958	Panthera_tigris_altaica
ENSUAMG00000025405	-	100	93.662	ENSPTIG00000019099	-	100	93.662	Panthera_tigris_altaica
ENSUAMG00000025405	-	100	86.620	ENSPTRG00000022791	MRPL42	100	86.620	Pan_troglodytes
ENSUAMG00000025405	-	100	77.551	ENSPANG00000030179	MRPL42	100	77.551	Papio_anubis
ENSUAMG00000025405	-	100	64.189	ENSPSIG00000010745	MRPL42	100	64.189	Pelodiscus_sinensis
ENSUAMG00000025405	-	98	81.295	ENSPEMG00000020562	-	99	81.295	Peromyscus_maniculatus_bairdii
ENSUAMG00000025405	-	100	68.243	ENSPCIG00000001472	-	77	68.243	Phascolarctos_cinereus
ENSUAMG00000025405	-	100	87.324	ENSPPYG00000004833	MRPL42	100	87.324	Pongo_abelii
ENSUAMG00000025405	-	88	86.441	ENSPCAG00000003791	MRPL42	100	86.441	Procavia_capensis
ENSUAMG00000025405	-	100	77.465	ENSPCOG00000025008	-	100	77.465	Propithecus_coquereli
ENSUAMG00000025405	-	100	69.014	ENSPCOG00000018896	-	100	69.014	Propithecus_coquereli
ENSUAMG00000025405	-	96	85.294	ENSPCOG00000014986	-	98	85.294	Propithecus_coquereli
ENSUAMG00000025405	-	61	71.951	ENSPVAG00000013736	-	69	71.951	Pteropus_vampyrus
ENSUAMG00000025405	-	98	81.295	ENSRNOG00000042740	Mrpl42	99	81.295	Rattus_norvegicus
ENSUAMG00000025405	-	98	75.714	ENSRNOG00000021867	AABR07009508.1	98	75.714	Rattus_norvegicus
ENSUAMG00000025405	-	100	87.324	ENSRBIG00000011046	-	100	87.324	Rhinopithecus_bieti
ENSUAMG00000025405	-	90	67.969	ENSRBIG00000044361	-	79	67.969	Rhinopithecus_bieti
ENSUAMG00000025405	-	100	88.028	ENSRROG00000033949	MRPL42	100	88.028	Rhinopithecus_roxellana
ENSUAMG00000025405	-	70	80.851	ENSSBOG00000027483	-	82	80.851	Saimiri_boliviensis_boliviensis
ENSUAMG00000025405	-	100	82.394	ENSSBOG00000009656	-	100	82.394	Saimiri_boliviensis_boliviensis
ENSUAMG00000025405	-	88	63.559	ENSSBOG00000025086	-	100	63.559	Saimiri_boliviensis_boliviensis
ENSUAMG00000025405	-	99	58.993	ENSSFOG00015006975	mrpl42	95	58.993	Scleropages_formosus
ENSUAMG00000025405	-	90	70.248	ENSSPUG00000015009	-	97	63.194	Sphenodon_punctatus
ENSUAMG00000025405	-	89	53.968	ENSSPAG00000013637	mrpl42	91	53.968	Stegastes_partitus
ENSUAMG00000025405	-	74	57.576	ENSSSCG00000034693	-	84	57.576	Sus_scrofa
ENSUAMG00000025405	-	100	92.254	ENSSSCG00000030478	-	100	92.254	Sus_scrofa
ENSUAMG00000025405	-	87	60.656	ENSSSCG00000035613	-	100	60.656	Sus_scrofa
ENSUAMG00000025405	-	99	65.957	ENSSSCG00000036897	-	99	65.957	Sus_scrofa
ENSUAMG00000025405	-	88	73.729	ENSTGUG00000008272	MRPL42	100	73.729	Taeniopygia_guttata
ENSUAMG00000025405	-	66	60.227	ENSTNIG00000018478	mrpl42	67	60.227	Tetraodon_nigroviridis
ENSUAMG00000025405	-	100	84.328	ENSTTRG00000003312	MRPL42	100	84.328	Tursiops_truncatus
ENSUAMG00000025405	-	100	100.000	ENSUMAG00000003107	-	100	100.000	Ursus_maritimus
ENSUAMG00000025405	-	86	80.488	ENSUMAG00000014643	-	77	80.488	Ursus_maritimus
ENSUAMG00000025405	-	88	94.915	ENSVPAG00000007658	MRPL42	100	94.915	Vicugna_pacos
ENSUAMG00000025405	-	100	95.775	ENSVVUG00000011842	-	100	95.775	Vulpes_vulpes
ENSUAMG00000025405	-	54	92.105	ENSVVUG00000002834	-	94	92.105	Vulpes_vulpes
ENSUAMG00000025405	-	53	93.333	ENSVVUG00000007253	-	96	93.333	Vulpes_vulpes
ENSUAMG00000025405	-	87	51.613	ENSXMAG00000004057	mrpl42	85	51.613	Xiphophorus_maculatus